RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 GLI4P10075 376 aa7.45□□□□□ -1.22
USP48-207ENST00000471752 EPB42P16452 691 aa7.45□□□□□ -1.22
USP48-207ENST00000471752 S1PR1P21453 382 aa7.45□□□□□ -1.22
USP48-207ENST00000471752 CNR1P21554 472 aa7.45□□□□□ -1.22
USP48-207ENST00000471752 CRABP2P29373 138 aa7.45□□□□□ -1.22
USP48-207ENST00000471752 ECHS1P30084 290 aa7.45□□□□□ -1.22
USP48-207ENST00000471752 SSTR4P31391 388 aa7.45□□□□□ -1.22
USP48-207ENST00000471752 SSR2P43308 183 aa7.45□□□□□ -1.22
USP48-207ENST00000471752 STT3AP46977 705 aa7.45□□□□□ -1.22
USP48-207ENST00000471752 TRPC1P48995 793 aa7.45□□□□□ -1.22
USP48-207ENST00000471752 SMSP52788 366 aa7.45□□□□□ -1.22
USP48-207ENST00000471752 CASP6P55212 293 aa7.45□□□□□ -1.22
USP48-207ENST00000471752 HERVK_113P63132 956 aa7.45□□□□□ -1.22
USP48-207ENST00000471752 ERVK-8P63133 956 aa7.45□□□□□ -1.22
USP48-207ENST00000471752 SKP1P63208 163 aa7.45□□□□□ -1.22
USP48-207ENST00000471752 DUSP8Q13202 625 aa7.45□□□□□ -1.22
USP48-207ENST00000471752 SETDB1Q15047 1291 aa7.45□□□□□ -1.22
USP48-207ENST00000471752 SGO1Q5FBB7 561 aa7.45□□□□□ -1.22
USP48-207ENST00000471752 GRHL2Q6ISB3 625 aa7.45□□□□□ -1.22
USP48-207ENST00000471752 NIPAL1Q6NVV3 410 aa7.45□□□□□ -1.22
USP48-207ENST00000471752 ZNF585AQ6P3V2 769 aa7.45□□□□□ -1.22
USP48-207ENST00000471752 PLXDC2Q6UX71 529 aa7.45□□□□□ -1.22
USP48-207ENST00000471752 MEX3BQ6ZN04 569 aaKnown RBP7.45□□□□□ -1.22
USP48-207ENST00000471752 SEM1Q6ZVN7 128 aa7.45□□□□□ -1.22
USP48-207ENST00000471752 TRILQ7L0X0 811 aa7.45□□□□□ -1.22
USP48-207ENST00000471752 ZNF572Q7Z3I7 529 aaPredicted RBP7.45□□□□□ -1.22
USP48-207ENST00000471752 MAATS1Q7Z4T9 603 aa7.45□□□□□ -1.22
USP48-207ENST00000471752 GPR180Q86V85 440 aa7.45□□□□□ -1.22
USP48-207ENST00000471752 MYLK4Q86YV6 388 aaPredicted RBP7.45□□□□□ -1.22
USP48-207ENST00000471752 CTAGE4Q8IX94 777 aa7.45□□□□□ -1.22
USP48-207ENST00000471752 TCAIMQ8N3R3 496 aa7.45□□□□□ -1.22
USP48-207ENST00000471752 BBOF1Q8ND07 529 aa7.45□□□□□ -1.22
USP48-207ENST00000471752 OR10G3Q8NGC4 313 aa7.45□□□□□ -1.22
USP48-207ENST00000471752 OR14A16Q8NHC5 309 aa7.45□□□□□ -1.22
USP48-207ENST00000471752 WDR20Q8TBZ3 569 aa7.45□□□□□ -1.22
USP48-207ENST00000471752 CDKL2Q92772 493 aa7.45□□□□□ -1.22
USP48-207ENST00000471752 PHF21BQ96EK2 531 aa7.45□□□□□ -1.22
USP48-207ENST00000471752 TREX2Q9BQ50 279 aaPredicted RBP7.45□□□□□ -1.22
USP48-207ENST00000471752 CCDC77Q9BR77 488 aa7.45□□□□□ -1.22
USP48-207ENST00000471752 ERVK-6Q9BXR3 956 aa7.45□□□□□ -1.22
USP48-207ENST00000471752 CAPS2Q9BXY5 557 aa7.45□□□□□ -1.22
USP48-207ENST00000471752 PITHD1Q9GZP4 211 aaPredicted RBP7.45□□□□□ -1.22
USP48-207ENST00000471752 ENKD1Q9H0I2 346 aa7.45□□□□□ -1.22
USP48-207ENST00000471752 VPS11Q9H270 941 aa7.45□□□□□ -1.22
USP48-207ENST00000471752 LIME1Q9H400 295 aa7.45□□□□□ -1.22
USP48-207ENST00000471752 RPF2Q9H7B2 306 aaKnown RBP7.45□□□□□ -1.22
USP48-207ENST00000471752 NOL11Q9H8H0 719 aaKnown RBP7.45□□□□□ -1.22
USP48-207ENST00000471752 IPPKQ9H8X2 491 aa7.45□□□□□ -1.22
USP48-207ENST00000471752 CNOT10Q9H9A5 744 aaKnown RBP7.45□□□□□ -1.22
USP48-207ENST00000471752 COPS7BQ9H9Q2 264 aaPredicted RBP7.45□□□□□ -1.22
USP48-207ENST00000471752 NMRAL1Q9HBL8 299 aa7.45□□□□□ -1.22
USP48-207ENST00000471752 TIMMDC1Q9NPL8 285 aa7.45□□□□□ -1.22
USP48-207ENST00000471752 HPF1Q9NWY4 346 aa7.45□□□□□ -1.22
USP48-207ENST00000471752 CPSF2Q9P2I0 782 aaKnown RBP7.45□□□□□ -1.22
USP48-207ENST00000471752 TXNDC16Q9P2K2 825 aa7.45□□□□□ -1.22
USP48-207ENST00000471752 ZNF225Q9UK10 706 aa7.45□□□□□ -1.22
USP48-207ENST00000471752 ERVK-19Q9WJR5 959 aa7.45□□□□□ -1.22
USP48-207ENST00000471752 KLF13Q9Y2Y9 288 aaPredicted RBP7.45□□□□□ -1.22
USP48-207ENST00000471752 PRRC2AP48634 2157 aaKnown RBP7.44□□□□□ -1.22
USP48-207ENST00000471752 DNHD1Q96M86 4753 aa7.44□□□□□ -1.22
USP48-207ENST00000471752 A0A0A6YYD5 115 aa7.44□□□□□ -1.22
USP48-207ENST00000471752 A0A0G2JNJ9 132 aa7.44□□□□□ -1.22
USP48-207ENST00000471752 ENO4A6NNW6 628 aa7.44□□□□□ -1.22
USP48-207ENST00000471752 C17orf51A8MQB3 221 aa7.44□□□□□ -1.22
USP48-207ENST00000471752 KLHL2O95198 593 aa7.44□□□□□ -1.22
USP48-207ENST00000471752 ACSL3O95573 720 aa7.44□□□□□ -1.22
USP48-207ENST00000471752 GPR75O95800 540 aa7.44□□□□□ -1.22
USP48-207ENST00000471752 AIFM1O95831 613 aa7.44□□□□□ -1.22
USP48-207ENST00000471752 S100BP04271 92 aaPredicted RBP7.44□□□□□ -1.22
USP48-207ENST00000471752 FAM58BPP0C7Q3 252 aa7.44□□□□□ -1.22
USP48-207ENST00000471752 CHN1P15882 459 aa7.44□□□□□ -1.22
USP48-207ENST00000471752 IGFBP2P18065 325 aa7.44□□□□□ -1.22
USP48-207ENST00000471752 AGAP20933 346 aa7.44□□□□□ -1.22
USP48-207ENST00000471752 ELAVL4P26378 380 aaKnown RBP7.44□□□□□ -1.22
USP48-207ENST00000471752 GCAP28676 217 aa7.44□□□□□ -1.22
USP48-207ENST00000471752 CDH13P55290 713 aa7.44□□□□□ -1.22
USP48-207ENST00000471752 PLGLB1Q02325 96 aa7.44□□□□□ -1.22
USP48-207ENST00000471752 TLE4Q04727 773 aa7.44□□□□□ -1.22
USP48-207ENST00000471752 MGAT2Q10469 447 aa7.44□□□□□ -1.22
USP48-207ENST00000471752 LAPTM5Q13571 262 aa7.44□□□□□ -1.22
USP48-207ENST00000471752 GTF2H2Q13888 395 aa7.44□□□□□ -1.22
USP48-207ENST00000471752 TESK1Q15569 626 aa7.44□□□□□ -1.22
USP48-207ENST00000471752 HIST2H2ACQ16777 129 aaPredicted RBP7.44□□□□□ -1.22
USP48-207ENST00000471752 PRSS53Q2L4Q9 553 aa7.44□□□□□ -1.22
USP48-207ENST00000471752 TCHHL1Q5QJ38 904 aaPredicted RBP7.44□□□□□ -1.22
USP48-207ENST00000471752 FNDC7Q5VTL7 733 aa7.44□□□□□ -1.22
USP48-207ENST00000471752 HIST2H2AA3Q6FI13 130 aa7.44□□□□□ -1.22
USP48-207ENST00000471752 GTF2H2CQ6P1K8 395 aa7.44□□□□□ -1.22
USP48-207ENST00000471752 FAM111BQ6SJ93 734 aa7.44□□□□□ -1.22
USP48-207ENST00000471752 FAM47EQ6ZV65 393 aa7.44□□□□□ -1.22
USP48-207ENST00000471752 CHSY3Q70JA7 882 aa7.44□□□□□ -1.22
USP48-207ENST00000471752 TBC1D1Q86TI0 1168 aaPredicted RBP7.44□□□□□ -1.22
USP48-207ENST00000471752 PRR22Q8IZ63 422 aa7.44□□□□□ -1.22
USP48-207ENST00000471752 PTGR2Q8N8N7 351 aaPredicted RBP7.44□□□□□ -1.22
USP48-207ENST00000471752 FAM98AQ8NCA5 519 aaKnown RBP7.44□□□□□ -1.22
USP48-207ENST00000471752 LILRB4Q8NHJ6 448 aa7.44□□□□□ -1.22
USP48-207ENST00000471752 DAZLQ92904 295 aaKnown RBP7.44□□□□□ -1.22
USP48-207ENST00000471752 RGMAQ96B86 450 aa7.44□□□□□ -1.22
USP48-207ENST00000471752 CMTM7Q96FZ5 175 aa7.44□□□□□ -1.22
USP48-207ENST00000471752 HBEGFQ99075 208 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms