RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 TOXO94900 526 aa12.73□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 CD97P48960 835 aa12.73□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 STK19P49842 368 aaPredicted RBP12.73□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 UFM1P61960 85 aa12.73□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 NPRL3Q12980 569 aa12.73□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 ZNF718Q3SXZ3 478 aa12.73□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 KIF18BQ86Y91 864 aa12.73□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 IQCF1Q8N6M8 205 aa12.73□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 OR4F6Q8NGB9 312 aa12.73□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 WDR20Q8TBZ3 569 aa12.73□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 GLYATL2Q8WU03 294 aa12.73□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 PIGVQ9NUD9 493 aa12.73□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 TP53TG5Q9Y2B4 290 aa12.73□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 SDK2Q58EX2 2172 aa12.73□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 SRPRAP08240 638 aaKnown RBP12.73□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 CHRNEQ04844 493 aa12.73□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 TMEM44Q2T9K0 475 aa12.73□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 GPRC6AQ5T6X5 926 aa12.73□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 OR14L1PQ8NHC6 308 aa12.73□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 DHX33Q9H6R0 707 aaKnown RBP12.73□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 TIMMDC1Q9NPL8 285 aa12.73□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 SLC2A6Q9UGQ3 507 aa12.73□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 SCP2D1Q9UJQ7 156 aa12.73□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 ERCC6L2Q5T890 1561 aa12.73□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 DIP2BQ9P265 1576 aa12.73□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 ARHGEF15O94989 841 aa12.73□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 AKR1C2P52895 323 aa12.73□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 RAB5BP61020 215 aa12.73□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 PAMR1Q6UXH9 720 aa12.73□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 PEX11GQ96HA9 241 aa12.73□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 DPAGT1Q9H3H5 408 aa12.73□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 SERTAD4Q9NUC0 356 aa12.73□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 MRPL15Q9P015 296 aaKnown RBP12.73□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 PSAT1Q9Y617 370 aa12.73□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 HEATR5BQ9P2D3 2071 aa12.73□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 MADDQ8WXG6 1647 aa12.73□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 BOLA2-SMG1P6H3BVE0 249 aa12.72□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 XRCC1P18887 633 aaPredicted RBP12.72□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 PRKACGP22612 351 aa12.72□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 DUSP3P51452 185 aaPredicted RBP12.72□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 HSD11B2P80365 405 aa12.72□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 PLCXD2Q0VAA5 305 aa12.72□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 SOWAHAQ2M3V2 549 aa12.72□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 ZNF367Q7RTV3 350 aa12.72□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 IL17RCQ8NAC3 791 aa12.72□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 SORCS1Q8WY21 1168 aa12.72□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 FRZBQ92765 325 aa12.72□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 TPT1P8Q9HAU6 139 aa12.72□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 DNAJB9Q9UBS3 223 aa12.72□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 CLEC4EQ9ULY5 219 aa12.72□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 WDPCPO95876 746 aa12.72□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 PRPH2P23942 346 aa12.72□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 HOXA10P31260 410 aaPredicted RBP12.72□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 ARG2P78540 354 aa12.72□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 RPA4Q13156 261 aa12.72□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 ADGRD1Q6QNK2 874 aa12.72□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 CFAP77Q6ZQR2 320 aa12.72□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 ASB15Q8WXK1 588 aa12.72□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 HDAC2Q92769 488 aaKnown RBP12.72□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 OR1A2Q9Y585 309 aa12.72□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 LOC100130705A0A1B0GUX0 176 aa12.72□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 ACOT7O00154 380 aa12.72□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 LEFTY2O00292 366 aa12.72□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 ADH1BP00325 375 aa12.72□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 RBM20Q5T481 1227 aaKnown RBP12.72□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 HSPA12BQ96MM6 686 aa12.72□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 DISC1C4P0D8 188 aa12.72□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 PPP1R11O60927 126 aaPredicted RBP12.72□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 PHC2Q8IXK0 858 aa12.72□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 NXF5Q9H1B4 397 aaKnown RBP12.72□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 MAFBQ9Y5Q3 323 aaPredicted RBP12.72□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 FANCMQ8IYD8 2048 aa12.72□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 IGLON5A6NGN9 336 aa12.72□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 AGTRAPQ6RW13 159 aa12.72□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 OR4D6Q8NGJ1 314 aa12.72□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 CXXC1Q9P0U4 656 aaPredicted RBP12.72□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 FER1L4A9Z1Z3 1794 aa12.72□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 BCL9O00512 1426 aa12.72□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 LEFTY1O75610 366 aa12.72□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 ACVR1BP36896 505 aa12.72□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 LBX1P52954 281 aa12.72□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 POU6F2P78424 691 aaPredicted RBP12.72□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 TLE1Q04724 770 aa12.72□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 GPR33Q49SQ1 333 aa12.72□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 TMEM107Q6UX40 140 aa12.72□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 RNF111Q6ZNA4 994 aa12.72□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 C6orf120Q7Z4R8 191 aa12.72□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 OR4N5Q8IXE1 308 aa12.72□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 FITM2Q8N6M3 262 aa12.72□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 DAZAP1Q96EP5 407 aaKnown RBP12.72□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 MROQ9BYG7 248 aa12.72□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 DCSTAMPQ9H295 470 aa12.72□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 RGCCQ9H4X1 137 aa12.72□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 APOBEC3BQ9UH17 382 aaKnown RBP12.72□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 TRIOBPQ9H2D6 2365 aa12.71□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 MYO5BQ9ULV0 1848 aa12.71□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 PRKCAP17252 672 aa12.71□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 RBMXP38159 391 aaKnown RBP12.71□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 ETV3P41162 512 aa12.71□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 LSSP48449 732 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms