RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 RERGQ96A58 199 aaPredicted RBP16.52■□□□□ 0.24
HSPG2-208ENST00000471322 SEPHS2Q99611 448 aa16.52■□□□□ 0.24
HSPG2-208ENST00000471322 ZFYVE21Q9BQ24 234 aa16.52■□□□□ 0.24
HSPG2-208ENST00000471322 BDH2Q9BUT1 245 aa16.52■□□□□ 0.24
HSPG2-208ENST00000471322 NLNQ9BYT8 704 aa16.52■□□□□ 0.24
HSPG2-208ENST00000471322 SEMA6AQ9H2E6 1030 aa16.52■□□□□ 0.24
HSPG2-208ENST00000471322 SEMA6CQ9H3T2 930 aa16.52■□□□□ 0.24
HSPG2-208ENST00000471322 SAMD4AQ9UPU9 718 aaKnown RBP16.52■□□□□ 0.24
HSPG2-208ENST00000471322 MSRB2Q9Y3D2 182 aa16.52■□□□□ 0.24
HSPG2-208ENST00000471322 ASB4Q9Y574 426 aa16.52■□□□□ 0.24
HSPG2-208ENST00000471322 PMS2P1A4D2B8 440 aa16.52■□□□□ 0.23
HSPG2-208ENST00000471322 NTRK1P04629 796 aa16.52■□□□□ 0.23
HSPG2-208ENST00000471322 UQCRBP14927 111 aa16.52■□□□□ 0.23
HSPG2-208ENST00000471322 CHI3L1P36222 383 aaPredicted RBP16.52■□□□□ 0.23
HSPG2-208ENST00000471322 PCBP4P57723 403 aaKnown RBP16.52■□□□□ 0.23
HSPG2-208ENST00000471322 FOXK2Q01167 660 aa16.52■□□□□ 0.23
HSPG2-208ENST00000471322 INTS11Q5TA45 600 aaKnown RBP16.52■□□□□ 0.23
HSPG2-208ENST00000471322 ZNF551Q7Z340 670 aaPredicted RBP16.52■□□□□ 0.23
HSPG2-208ENST00000471322 C10orf111Q8N326 155 aa16.52■□□□□ 0.23
HSPG2-208ENST00000471322 C11orf65Q8NCR3 313 aa16.52■□□□□ 0.23
HSPG2-208ENST00000471322 RCBTB1Q8NDN9 531 aa16.52■□□□□ 0.23
HSPG2-208ENST00000471322 OR8K5Q8NH50 307 aa16.52■□□□□ 0.23
HSPG2-208ENST00000471322 DEPDC7Q96QD5 511 aa16.52■□□□□ 0.23
HSPG2-208ENST00000471322 MACROD1Q9BQ69 325 aa16.52■□□□□ 0.23
HSPG2-208ENST00000471322 C9orf16Q9BUW7 83 aa16.52■□□□□ 0.23
HSPG2-208ENST00000471322 TEX10Q9NXF1 929 aaPredicted RBP16.52■□□□□ 0.23
HSPG2-208ENST00000471322 KLHL3Q9UH77 587 aa16.52■□□□□ 0.23
HSPG2-208ENST00000471322 RPS6KA6Q9UK32 745 aa16.52■□□□□ 0.23
HSPG2-208ENST00000471322 RAB26Q9ULW5 256 aa16.52■□□□□ 0.23
HSPG2-208ENST00000471322 KIF26BQ2KJY2 2108 aa16.51■□□□□ 0.23
HSPG2-208ENST00000471322 A0A0G2JN53 185 aa16.51■□□□□ 0.23
HSPG2-208ENST00000471322 TRABD2BA6NFA1 517 aa16.51■□□□□ 0.23
HSPG2-208ENST00000471322 C1QTNF9BB2RNN3 333 aa16.51■□□□□ 0.23
HSPG2-208ENST00000471322 ZSCAN9O15535 394 aaPredicted RBP16.51■□□□□ 0.23
HSPG2-208ENST00000471322 TPST1O60507 370 aa16.51■□□□□ 0.23
HSPG2-208ENST00000471322 DEAF1O75398 565 aaPredicted RBP16.51■□□□□ 0.23
HSPG2-208ENST00000471322 CPNE6O95741 557 aa16.51■□□□□ 0.23
HSPG2-208ENST00000471322 C1QTNF9P0C862 333 aa16.51■□□□□ 0.23
HSPG2-208ENST00000471322 ZNF26P17031 533 aaPredicted RBP16.51■□□□□ 0.23
HSPG2-208ENST00000471322 CAMK2BQ13554 666 aa16.51■□□□□ 0.23
HSPG2-208ENST00000471322 ADRM1Q16186 407 aa16.51■□□□□ 0.23
HSPG2-208ENST00000471322 PRSS53Q2L4Q9 553 aa16.51■□□□□ 0.23
HSPG2-208ENST00000471322 SNAP47Q5SQN1 464 aa16.51■□□□□ 0.23
HSPG2-208ENST00000471322 PHF19Q5T6S3 580 aa16.51■□□□□ 0.23
HSPG2-208ENST00000471322 ZNF574Q6ZN55 896 aaPredicted RBP16.51■□□□□ 0.23
HSPG2-208ENST00000471322 ZBTB49Q6ZSB9 765 aa16.51■□□□□ 0.23
HSPG2-208ENST00000471322 ABHD13Q7L211 337 aa16.51■□□□□ 0.23
HSPG2-208ENST00000471322 PTOV1Q86YD1 416 aa16.51■□□□□ 0.23
HSPG2-208ENST00000471322 MMP21Q8N119 569 aa16.51■□□□□ 0.23
HSPG2-208ENST00000471322 AMER3Q8N944 861 aa16.51■□□□□ 0.23
HSPG2-208ENST00000471322 ZFP28Q8NHY6 868 aa16.51■□□□□ 0.23
HSPG2-208ENST00000471322 FBXO30Q8TB52 745 aa16.51■□□□□ 0.23
HSPG2-208ENST00000471322 PYURFQ96I23 114 aa16.51■□□□□ 0.23
HSPG2-208ENST00000471322 CHST8Q9H2A9 424 aa16.51■□□□□ 0.23
HSPG2-208ENST00000471322 POMT2Q9UKY4 750 aa16.51■□□□□ 0.23
HSPG2-208ENST00000471322 PSME2Q9UL46 239 aa16.51■□□□□ 0.23
HSPG2-208ENST00000471322 FAF1Q9UNN5 650 aaPredicted RBP16.51■□□□□ 0.23
HSPG2-208ENST00000471322 HEATR5BQ9P2D3 2071 aa16.5■□□□□ 0.23
HSPG2-208ENST00000471322 COL27A1Q8IZC6 1860 aaPredicted RBP16.5■□□□□ 0.23
HSPG2-208ENST00000471322 A0A0J9YVX5 310 aa16.5■□□□□ 0.23
HSPG2-208ENST00000471322 LILRA5A6NI73 299 aa16.5■□□□□ 0.23
HSPG2-208ENST00000471322 CLOCKO15516 846 aa16.5■□□□□ 0.23
HSPG2-208ENST00000471322 CTSVO60911 334 aa16.5■□□□□ 0.23
HSPG2-208ENST00000471322 UBXN7O94888 489 aa16.5■□□□□ 0.23
HSPG2-208ENST00000471322 SERPINA1P01009 418 aa16.5■□□□□ 0.23
HSPG2-208ENST00000471322 KDELR2P33947 212 aa16.5■□□□□ 0.23
HSPG2-208ENST00000471322 PCGF2P35227 344 aa16.5■□□□□ 0.23
HSPG2-208ENST00000471322 CRATP43155 626 aa16.5■□□□□ 0.23
HSPG2-208ENST00000471322 RAB8AP61006 207 aa16.5■□□□□ 0.23
HSPG2-208ENST00000471322 BTN3A2P78410 334 aa16.5■□□□□ 0.23
HSPG2-208ENST00000471322 TMTC4Q5T4D3 741 aa16.5■□□□□ 0.23
HSPG2-208ENST00000471322 PPP4R4Q6NUP7 873 aa16.5■□□□□ 0.23
HSPG2-208ENST00000471322 IRGCQ6NXR0 463 aa16.5■□□□□ 0.23
HSPG2-208ENST00000471322 RNF44Q7L0R7 432 aa16.5■□□□□ 0.23
HSPG2-208ENST00000471322 SLC30A8Q8IWU4 369 aa16.5■□□□□ 0.23
HSPG2-208ENST00000471322 PNPT1Q8TCS8 783 aaKnown RBP16.5■□□□□ 0.23
HSPG2-208ENST00000471322 UTP15Q8TED0 518 aaKnown RBP16.5■□□□□ 0.23
HSPG2-208ENST00000471322 EXOSC8Q96B26 276 aaKnown RBP16.5■□□□□ 0.23
HSPG2-208ENST00000471322 SLC47A1Q96FL8 570 aa16.5■□□□□ 0.23
HSPG2-208ENST00000471322 NR1H4Q96RI1 486 aaPredicted RBP16.5■□□□□ 0.23
HSPG2-208ENST00000471322 SERINC2Q96SA4 455 aa16.5■□□□□ 0.23
HSPG2-208ENST00000471322 COQ10BQ9H8M1 238 aa16.5■□□□□ 0.23
HSPG2-208ENST00000471322 SLC35C2Q9NQQ7 365 aa16.5■□□□□ 0.23
HSPG2-208ENST00000471322 PRDM9Q9NQV7 894 aa16.5■□□□□ 0.23
HSPG2-208ENST00000471322 UTS2RQ9UKP6 389 aa16.5■□□□□ 0.23
HSPG2-208ENST00000471322 A0A1W2PNU3 283 aaPredicted RBP16.49■□□□□ 0.23
HSPG2-208ENST00000471322 A8MU76 341 aa16.49■□□□□ 0.23
HSPG2-208ENST00000471322 DUX1O43812 170 aa16.49■□□□□ 0.23
HSPG2-208ENST00000471322 PRKD3O94806 890 aa16.49■□□□□ 0.23
HSPG2-208ENST00000471322 STATHP02808 62 aa16.49■□□□□ 0.23
HSPG2-208ENST00000471322 SMIM10L1P0DMW3 83 aa16.49■□□□□ 0.23
HSPG2-208ENST00000471322 NTSP30990 170 aa16.49■□□□□ 0.23
HSPG2-208ENST00000471322 SOAT1P35610 550 aa16.49■□□□□ 0.23
HSPG2-208ENST00000471322 PRIM2P49643 509 aa16.49■□□□□ 0.23
HSPG2-208ENST00000471322 MED21Q13503 144 aa16.49■□□□□ 0.23
HSPG2-208ENST00000471322 C3orf38Q5JPI3 329 aa16.49■□□□□ 0.23
HSPG2-208ENST00000471322 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.49■□□□□ 0.23
HSPG2-208ENST00000471322 GCNT6Q5T4J0 391 aa16.49■□□□□ 0.23
HSPG2-208ENST00000471322 ANGPTL8Q6UXH0 198 aa16.49■□□□□ 0.23
HSPG2-208ENST00000471322 KCT2Q8NC54 265 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms