RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 GUSBP11Q6P575 273 aa6.28□□□□□ -1.4
VAMP3-202ENST00000470357 ABHD17CQ6PCB6 329 aa6.28□□□□□ -1.4
VAMP3-202ENST00000470357 PCSK4Q6UW60 755 aa6.28□□□□□ -1.4
VAMP3-202ENST00000470357 GK5Q6ZS86 529 aa6.28□□□□□ -1.4
VAMP3-202ENST00000470357 FAM92BQ6ZTR7 304 aa6.28□□□□□ -1.4
VAMP3-202ENST00000470357 REC114Q7Z4M0 266 aa6.28□□□□□ -1.4
VAMP3-202ENST00000470357 VN1R4Q7Z5H5 301 aa6.28□□□□□ -1.4
VAMP3-202ENST00000470357 CAMKMTQ7Z624 323 aa6.28□□□□□ -1.4
VAMP3-202ENST00000470357 GPR180Q86V85 440 aa6.28□□□□□ -1.4
VAMP3-202ENST00000470357 PLD3Q8IV08 490 aa6.28□□□□□ -1.4
VAMP3-202ENST00000470357 NAXDQ8IW45 347 aa6.28□□□□□ -1.4
VAMP3-202ENST00000470357 RIMKLAQ8IXN7 391 aa6.28□□□□□ -1.4
VAMP3-202ENST00000470357 GPR135Q8IZ08 494 aa6.28□□□□□ -1.4
VAMP3-202ENST00000470357 SAMD14Q8IZD0 417 aaPredicted RBP6.28□□□□□ -1.4
VAMP3-202ENST00000470357 D2HGDHQ8N465 521 aa6.28□□□□□ -1.4
VAMP3-202ENST00000470357 DNAJC22Q8N4W6 341 aa6.28□□□□□ -1.4
VAMP3-202ENST00000470357 CSNK1A1LQ8N752 337 aa6.28□□□□□ -1.4
VAMP3-202ENST00000470357 POU5F2Q8N7G0 328 aa6.28□□□□□ -1.4
VAMP3-202ENST00000470357 Q8N9G6 341 aaPredicted RBP6.28□□□□□ -1.4
VAMP3-202ENST00000470357 TTC29Q8NA56 475 aaPredicted RBP6.28□□□□□ -1.4
VAMP3-202ENST00000470357 FAM13CQ8NE31 585 aa6.28□□□□□ -1.4
VAMP3-202ENST00000470357 C7orf57Q8NEG2 295 aa6.28□□□□□ -1.4
VAMP3-202ENST00000470357 OR4D9Q8NGE8 314 aa6.28□□□□□ -1.4
VAMP3-202ENST00000470357 OR8J2Q8NGG1 315 aa6.28□□□□□ -1.4
VAMP3-202ENST00000470357 OR8K5Q8NH50 307 aa6.28□□□□□ -1.4
VAMP3-202ENST00000470357 IFI44Q8TCB0 444 aa6.28□□□□□ -1.4
VAMP3-202ENST00000470357 ADAMTS18Q8TE60 1221 aa6.28□□□□□ -1.4
VAMP3-202ENST00000470357 KLHL6Q8WZ60 621 aa6.28□□□□□ -1.4
VAMP3-202ENST00000470357 PRR11Q96HE9 360 aaPredicted RBP6.28□□□□□ -1.4
VAMP3-202ENST00000470357 ITCHQ96J02 903 aa6.28□□□□□ -1.4
VAMP3-202ENST00000470357 SLC41A2Q96JW4 573 aa6.28□□□□□ -1.4
VAMP3-202ENST00000470357 TSSK3Q96PN8 268 aa6.28□□□□□ -1.4
VAMP3-202ENST00000470357 SH3GL1Q99961 368 aa6.28□□□□□ -1.4
VAMP3-202ENST00000470357 HOPXQ9BPY8 73 aaPredicted RBP6.28□□□□□ -1.4
VAMP3-202ENST00000470357 C17orf62Q9BQA9 187 aa6.28□□□□□ -1.4
VAMP3-202ENST00000470357 NPLQ9BXD5 320 aaPredicted RBP6.28□□□□□ -1.4
VAMP3-202ENST00000470357 LRRN3Q9H3W5 708 aa6.28□□□□□ -1.4
VAMP3-202ENST00000470357 REEP4Q9H6H4 257 aa6.28□□□□□ -1.4
VAMP3-202ENST00000470357 CAAP1Q9H8G2 361 aa6.28□□□□□ -1.4
VAMP3-202ENST00000470357 WDR41Q9HAD4 459 aa6.28□□□□□ -1.4
VAMP3-202ENST00000470357 LYRM4Q9HD34 91 aa6.28□□□□□ -1.4
VAMP3-202ENST00000470357 MIEF1Q9NQG6 463 aa6.28□□□□□ -1.4
VAMP3-202ENST00000470357 TAS2R1Q9NYW7 299 aa6.28□□□□□ -1.4
VAMP3-202ENST00000470357 EHD3Q9NZN3 535 aa6.28□□□□□ -1.4
VAMP3-202ENST00000470357 PDP2Q9P2J9 529 aa6.28□□□□□ -1.4
VAMP3-202ENST00000470357 REV1Q9UBZ9 1251 aa6.28□□□□□ -1.4
VAMP3-202ENST00000470357 ATP6V1HQ9UI12 483 aa6.28□□□□□ -1.4
VAMP3-202ENST00000470357 PSME2Q9UL46 239 aa6.28□□□□□ -1.4
VAMP3-202ENST00000470357 PRPF19Q9UMS4 504 aaKnown RBP6.28□□□□□ -1.4
VAMP3-202ENST00000470357 DLGAP4Q9Y2H0 992 aa6.28□□□□□ -1.4
VAMP3-202ENST00000470357 KLHL20Q9Y2M5 609 aa6.28□□□□□ -1.4
VAMP3-202ENST00000470357 NUP214P35658 2090 aaPredicted RBP6.28□□□□□ -1.4
VAMP3-202ENST00000470357 KNTC1P50748 2209 aa6.27□□□□□ -1.4
VAMP3-202ENST00000470357 NBPF19A0A087WUL8 3843 aa6.27□□□□□ -1.41
VAMP3-202ENST00000470357 A0A0A6YYD5 115 aa6.27□□□□□ -1.41
VAMP3-202ENST00000470357 IGHV5-51A0A0C4DH38 117 aa6.27□□□□□ -1.41
VAMP3-202ENST00000470357 LY6G6EA0A0G2JKS1 128 aa6.27□□□□□ -1.41
VAMP3-202ENST00000470357 C1orf226A1L170 272 aa6.27□□□□□ -1.41
VAMP3-202ENST00000470357 EIF4E1BA6NMX2 242 aaKnown RBP6.27□□□□□ -1.41
VAMP3-202ENST00000470357 TMX2-CTNND1H3BSU7 103 aa6.27□□□□□ -1.41
VAMP3-202ENST00000470357 SAP18O00422 153 aaKnown RBP6.27□□□□□ -1.41
VAMP3-202ENST00000470357 SCAMP2O15127 329 aaKnown RBP6.27□□□□□ -1.41
VAMP3-202ENST00000470357 DNAJA2O60884 412 aa6.27□□□□□ -1.41
VAMP3-202ENST00000470357 SH3BGRLO75368 114 aa6.27□□□□□ -1.41
VAMP3-202ENST00000470357 ERN1O75460 977 aaKnown RBP6.27□□□□□ -1.41
VAMP3-202ENST00000470357 KCNH1O95259 989 aa6.27□□□□□ -1.41
VAMP3-202ENST00000470357 HTR3BO95264 441 aa6.27□□□□□ -1.41
VAMP3-202ENST00000470357 CBX7O95931 251 aa6.27□□□□□ -1.41
VAMP3-202ENST00000470357 TBX6O95947 436 aaPredicted RBP6.27□□□□□ -1.41
VAMP3-202ENST00000470357 RPLP0P05388 317 aaKnown RBP6.27□□□□□ -1.41
VAMP3-202ENST00000470357 FAM58BPP0C7Q3 252 aa6.27□□□□□ -1.41
VAMP3-202ENST00000470357 CD8BP10966 210 aa6.27□□□□□ -1.41
VAMP3-202ENST00000470357 ALOX12P18054 663 aa6.27□□□□□ -1.41
VAMP3-202ENST00000470357 NELFEP18615 380 aaKnown RBP6.27□□□□□ -1.41
VAMP3-202ENST00000470357 DDCP20711 480 aa6.27□□□□□ -1.41
VAMP3-202ENST00000470357 TPP2P29144 1249 aaPredicted RBP6.27□□□□□ -1.41
VAMP3-202ENST00000470357 BUD31P41223 144 aaPredicted RBP6.27□□□□□ -1.41
VAMP3-202ENST00000470357 LSSP48449 732 aa6.27□□□□□ -1.41
VAMP3-202ENST00000470357 TRPC1P48995 793 aa6.27□□□□□ -1.41
VAMP3-202ENST00000470357 PLA2G16P53816 162 aa6.27□□□□□ -1.41
VAMP3-202ENST00000470357 ARSFP54793 590 aa6.27□□□□□ -1.41
VAMP3-202ENST00000470357 GFERP55789 205 aa6.27□□□□□ -1.41
VAMP3-202ENST00000470357 NME5P56597 212 aa6.27□□□□□ -1.41
VAMP3-202ENST00000470357 VSX2P58304 361 aaPredicted RBP6.27□□□□□ -1.41
VAMP3-202ENST00000470357 TAS2R50P59544 299 aa6.27□□□□□ -1.41
VAMP3-202ENST00000470357 PPP1CAP62136 330 aa6.27□□□□□ -1.41
VAMP3-202ENST00000470357 RAE1P78406 368 aaKnown RBP6.27□□□□□ -1.41
VAMP3-202ENST00000470357 E2F1Q01094 437 aa6.27□□□□□ -1.41
VAMP3-202ENST00000470357 ACY1Q03154 408 aa6.27□□□□□ -1.41
VAMP3-202ENST00000470357 C2orf80Q0P641 193 aa6.27□□□□□ -1.41
VAMP3-202ENST00000470357 PDE7AQ13946 482 aa6.27□□□□□ -1.41
VAMP3-202ENST00000470357 NFYCQ13952 458 aa6.27□□□□□ -1.41
VAMP3-202ENST00000470357 FAM53BQ14153 422 aa6.27□□□□□ -1.41
VAMP3-202ENST00000470357 SPIDRQ14159 915 aa6.27□□□□□ -1.41
VAMP3-202ENST00000470357 MAPKAPK3Q16644 382 aa6.27□□□□□ -1.41
VAMP3-202ENST00000470357 MUM1Q2TAK8 710 aa6.27□□□□□ -1.41
VAMP3-202ENST00000470357 TRMT5Q32P41 509 aaKnown RBP6.27□□□□□ -1.41
VAMP3-202ENST00000470357 FAM174BQ3ZCQ3 159 aa6.27□□□□□ -1.41
VAMP3-202ENST00000470357 VPS26BQ4G0F5 336 aa6.27□□□□□ -1.41
VAMP3-202ENST00000470357 TIGD2Q4W5G0 525 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms