RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 C16orf72Q14CZ0 275 aa14.24□□□□□ -0.13
COL4A5-203ENST00000470339 CDCP2Q5VXM1 449 aa14.24□□□□□ -0.13
COL4A5-203ENST00000470339 ZNF551Q7Z340 670 aaPredicted RBP14.24□□□□□ -0.13
COL4A5-203ENST00000470339 B3GNT8Q7Z7M8 397 aa14.24□□□□□ -0.13
COL4A5-203ENST00000470339 PPP1R3BQ86XI6 285 aa14.24□□□□□ -0.13
COL4A5-203ENST00000470339 LRRC25Q8N386 305 aaPredicted RBP14.24□□□□□ -0.13
COL4A5-203ENST00000470339 RNF148Q8N7C7 305 aa14.24□□□□□ -0.13
COL4A5-203ENST00000470339 BMPERQ8N8U9 685 aa14.24□□□□□ -0.13
COL4A5-203ENST00000470339 OR51Q1Q8NH59 317 aa14.24□□□□□ -0.13
COL4A5-203ENST00000470339 SUN3Q8TAQ9 357 aa14.24□□□□□ -0.13
COL4A5-203ENST00000470339 WDR60Q8WVS4 1066 aa14.24□□□□□ -0.13
COL4A5-203ENST00000470339 MOAP1Q96BY2 351 aa14.24□□□□□ -0.13
COL4A5-203ENST00000470339 TBC1D20Q96BZ9 403 aa14.24□□□□□ -0.13
COL4A5-203ENST00000470339 CCDC124Q96CT7 223 aaKnown RBP14.24□□□□□ -0.13
COL4A5-203ENST00000470339 ZNF583Q96ND8 569 aa14.24□□□□□ -0.13
COL4A5-203ENST00000470339 OR1F2PQ96R84 312 aa14.24□□□□□ -0.13
COL4A5-203ENST00000470339 KCTD14Q9BQ13 255 aaPredicted RBP14.24□□□□□ -0.13
COL4A5-203ENST00000470339 SLC35A5Q9BS91 424 aa14.24□□□□□ -0.13
COL4A5-203ENST00000470339 IKZF5Q9H5V7 419 aa14.24□□□□□ -0.13
COL4A5-203ENST00000470339 EPS8L2Q9H6S3 715 aa14.24□□□□□ -0.13
COL4A5-203ENST00000470339 CXorf36Q9H7Y0 433 aa14.24□□□□□ -0.13
COL4A5-203ENST00000470339 ZNF304Q9HCX3 659 aa14.24□□□□□ -0.13
COL4A5-203ENST00000470339 SIRT3Q9NTG7 399 aaPredicted RBP14.24□□□□□ -0.13
COL4A5-203ENST00000470339 MAP4K5Q9Y4K4 846 aa14.24□□□□□ -0.13
COL4A5-203ENST00000470339 FER1L5A0AVI2 2057 aa14.24□□□□□ -0.13
COL4A5-203ENST00000470339 B4E171 279 aa14.23□□□□□ -0.13
COL4A5-203ENST00000470339 FAM227AF5H4B4 570 aa14.23□□□□□ -0.13
COL4A5-203ENST00000470339 SORBS2O94875 1100 aaKnown RBP14.23□□□□□ -0.13
COL4A5-203ENST00000470339 STAMBPO95630 424 aa14.23□□□□□ -0.13
COL4A5-203ENST00000470339 CPMP14384 443 aa14.23□□□□□ -0.13
COL4A5-203ENST00000470339 FEN1P39748 380 aaKnown RBP14.23□□□□□ -0.13
COL4A5-203ENST00000470339 TSPAN7P41732 249 aa14.23□□□□□ -0.13
COL4A5-203ENST00000470339 GZMMP51124 257 aa14.23□□□□□ -0.13
COL4A5-203ENST00000470339 PDX1P52945 283 aa14.23□□□□□ -0.13
COL4A5-203ENST00000470339 HSD17B7P56937 341 aa14.23□□□□□ -0.13
COL4A5-203ENST00000470339 MS4A2Q01362 244 aa14.23□□□□□ -0.13
COL4A5-203ENST00000470339 FADDQ13158 208 aa14.23□□□□□ -0.13
COL4A5-203ENST00000470339 GAB1Q13480 694 aa14.23□□□□□ -0.13
COL4A5-203ENST00000470339 KPNB1Q14974 876 aaKnown RBP14.23□□□□□ -0.13
COL4A5-203ENST00000470339 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.23□□□□□ -0.13
COL4A5-203ENST00000470339 CPZQ66K79 652 aa14.23□□□□□ -0.13
COL4A5-203ENST00000470339 BHLHB9Q6PI77 547 aa14.23□□□□□ -0.13
COL4A5-203ENST00000470339 PROSER1Q86XN7 944 aa14.23□□□□□ -0.13
COL4A5-203ENST00000470339 CCDC116Q8IYX3 515 aa14.23□□□□□ -0.13
COL4A5-203ENST00000470339 OR10A6Q8NH74 314 aa14.23□□□□□ -0.13
COL4A5-203ENST00000470339 SFXN5Q8TD22 340 aa14.23□□□□□ -0.13
COL4A5-203ENST00000470339 JADE3Q92613 823 aa14.23□□□□□ -0.13
COL4A5-203ENST00000470339 ANKRD9Q96BM1 317 aaPredicted RBP14.23□□□□□ -0.13
COL4A5-203ENST00000470339 NEURL3Q96EH8 262 aa14.23□□□□□ -0.13
COL4A5-203ENST00000470339 FAM120BQ96EK7 910 aaKnown RBP14.23□□□□□ -0.13
COL4A5-203ENST00000470339 AURKBQ96GD4 344 aaPredicted RBP14.23□□□□□ -0.13
COL4A5-203ENST00000470339 STRADBQ9C0K7 418 aa14.23□□□□□ -0.13
COL4A5-203ENST00000470339 OCIAD1Q9NX40 245 aa14.23□□□□□ -0.13
COL4A5-203ENST00000470339 NTMQ9P121 344 aa14.23□□□□□ -0.13
COL4A5-203ENST00000470339 ACTR3BQ9P1U1 418 aa14.23□□□□□ -0.13
COL4A5-203ENST00000470339 HCN3Q9P1Z3 774 aa14.23□□□□□ -0.13
COL4A5-203ENST00000470339 NDOR1Q9UHB4 597 aa14.23□□□□□ -0.13
COL4A5-203ENST00000470339 PACSIN3Q9UKS6 424 aa14.23□□□□□ -0.13
COL4A5-203ENST00000470339 TMEM184BQ9Y519 407 aaPredicted RBP14.23□□□□□ -0.13
COL4A5-203ENST00000470339 SYNDIG1LA6NDD5 238 aa14.22□□□□□ -0.13
COL4A5-203ENST00000470339 EFCAB7A8K855 629 aa14.22□□□□□ -0.13
COL4A5-203ENST00000470339 FAM220BPB1ANY3 271 aa14.22□□□□□ -0.13
COL4A5-203ENST00000470339 PLOD2O00469 737 aa14.22□□□□□ -0.13
COL4A5-203ENST00000470339 SCRG1O75711 98 aa14.22□□□□□ -0.13
COL4A5-203ENST00000470339 BMP10O95393 424 aa14.22□□□□□ -0.13
COL4A5-203ENST00000470339 ATP1B1P05026 303 aa14.22□□□□□ -0.13
COL4A5-203ENST00000470339 FHP07954 510 aa14.22□□□□□ -0.13
COL4A5-203ENST00000470339 SLC35E2P0CK97 266 aa14.22□□□□□ -0.13
COL4A5-203ENST00000470339 TCN1P20061 433 aaPredicted RBP14.22□□□□□ -0.13
COL4A5-203ENST00000470339 FBLP22087 321 aaKnown RBP14.22□□□□□ -0.13
COL4A5-203ENST00000470339 GPC1P35052 558 aa14.22□□□□□ -0.13
COL4A5-203ENST00000470339 CHI3L1P36222 383 aaPredicted RBP14.22□□□□□ -0.13
COL4A5-203ENST00000470339 CCT3P49368 545 aaKnown RBP14.22□□□□□ -0.13
COL4A5-203ENST00000470339 IGLV3-21P80748 117 aaPredicted RBP14.22□□□□□ -0.13
COL4A5-203ENST00000470339 TXNL4AP83876 142 aaKnown RBP14.22□□□□□ -0.13
COL4A5-203ENST00000470339 INSM1Q01101 510 aaPredicted RBP14.22□□□□□ -0.13
COL4A5-203ENST00000470339 FOLH1Q04609 750 aa14.22□□□□□ -0.13
COL4A5-203ENST00000470339 HSPB3Q12988 150 aa14.22□□□□□ -0.13
COL4A5-203ENST00000470339 FLOT2Q14254 428 aa14.22□□□□□ -0.13
COL4A5-203ENST00000470339 TRIP6Q15654 476 aaKnown RBP14.22□□□□□ -0.13
COL4A5-203ENST00000470339 SAXO2Q658L1 398 aa14.22□□□□□ -0.13
COL4A5-203ENST00000470339 PWWP2BQ6NUJ5 590 aa14.22□□□□□ -0.13
COL4A5-203ENST00000470339 FAM180BQ6P0A1 224 aa14.22□□□□□ -0.13
COL4A5-203ENST00000470339 ERICH5Q6P6B1 374 aa14.22□□□□□ -0.13
COL4A5-203ENST00000470339 TMEM126BQ8IUX1 230 aa14.22□□□□□ -0.13
COL4A5-203ENST00000470339 TMEM52Q8NDY8 209 aa14.22□□□□□ -0.13
COL4A5-203ENST00000470339 OR2T12Q8NG77 320 aa14.22□□□□□ -0.13
COL4A5-203ENST00000470339 OR52N2Q8NGI0 321 aa14.22□□□□□ -0.13
COL4A5-203ENST00000470339 PEX11GQ96HA9 241 aa14.22□□□□□ -0.13
COL4A5-203ENST00000470339 REXO5Q96IC2 774 aaKnown RBP14.22□□□□□ -0.13
COL4A5-203ENST00000470339 CMKLR1Q99788 373 aa14.22□□□□□ -0.13
COL4A5-203ENST00000470339 TRIM8Q9BZR9 551 aa14.22□□□□□ -0.13
COL4A5-203ENST00000470339 SLC7A5P2Q9GIP4 190 aa14.22□□□□□ -0.13
COL4A5-203ENST00000470339 C3orf14Q9HBI5 128 aa14.22□□□□□ -0.13
COL4A5-203ENST00000470339 MKKSQ9NPJ1 570 aaPredicted RBP14.22□□□□□ -0.13
COL4A5-203ENST00000470339 DHCR7Q9UBM7 475 aaKnown RBP14.22□□□□□ -0.13
COL4A5-203ENST00000470339 MMACHCQ9Y4U1 282 aa14.22□□□□□ -0.13
COL4A5-203ENST00000470339 SNX13Q9Y5W8 968 aa14.22□□□□□ -0.13
COL4A5-203ENST00000470339 ZNF292O60281 2723 aa14.21□□□□□ -0.13
COL4A5-203ENST00000470339 KIF26BQ2KJY2 2108 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms