RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 RHEBL1Q8TAI7 183 aa12.26□□□□□ -0.45
CPSF4-210ENST00000469897 NUBPLQ8TB37 319 aa12.26□□□□□ -0.45
CPSF4-210ENST00000469897 UBTD2Q8WUN7 234 aa12.26□□□□□ -0.45
CPSF4-210ENST00000469897 CENPKQ9BS16 269 aa12.26□□□□□ -0.45
CPSF4-210ENST00000469897 TTYH2Q9BSA4 534 aa12.26□□□□□ -0.45
CPSF4-210ENST00000469897 CNPPD1Q9BV87 410 aa12.26□□□□□ -0.45
CPSF4-210ENST00000469897 RAB17Q9H0T7 212 aa12.26□□□□□ -0.45
CPSF4-210ENST00000469897 DMRT3Q9NQL9 472 aa12.26□□□□□ -0.45
CPSF4-210ENST00000469897 ACAD8Q9UKU7 415 aa12.26□□□□□ -0.45
CPSF4-210ENST00000469897 RNF11Q9Y3C5 154 aa12.26□□□□□ -0.45
CPSF4-210ENST00000469897 ASB4Q9Y574 426 aa12.26□□□□□ -0.45
CPSF4-210ENST00000469897 PCDHGA11Q9Y5H2 935 aa12.26□□□□□ -0.45
CPSF4-210ENST00000469897 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.26□□□□□ -0.45
CPSF4-210ENST00000469897 SCN2AQ99250 2005 aa12.26□□□□□ -0.45
CPSF4-210ENST00000469897 OTOGQ6ZRI0 2925 aa12.26□□□□□ -0.45
CPSF4-210ENST00000469897 A0A087X1B8 175 aa12.25□□□□□ -0.45
CPSF4-210ENST00000469897 A0A1W2PR48 441 aa12.25□□□□□ -0.45
CPSF4-210ENST00000469897 OR14I1A6ND48 311 aa12.25□□□□□ -0.45
CPSF4-210ENST00000469897 EEDO75530 441 aaKnown RBP12.25□□□□□ -0.45
CPSF4-210ENST00000469897 NADKO95544 446 aaPredicted RBP12.25□□□□□ -0.45
CPSF4-210ENST00000469897 GPR75O95800 540 aa12.25□□□□□ -0.45
CPSF4-210ENST00000469897 RFPL3SP0C7P2 107 aa12.25□□□□□ -0.45
CPSF4-210ENST00000469897 GLI4P10075 376 aa12.25□□□□□ -0.45
CPSF4-210ENST00000469897 BSGP35613 385 aa12.25□□□□□ -0.45
CPSF4-210ENST00000469897 MAN2A2P49641 1150 aa12.25□□□□□ -0.45
CPSF4-210ENST00000469897 HERVK_113P63132 956 aa12.25□□□□□ -0.45
CPSF4-210ENST00000469897 ERVK-8P63133 956 aa12.25□□□□□ -0.45
CPSF4-210ENST00000469897 SLC7A5Q01650 507 aa12.25□□□□□ -0.45
CPSF4-210ENST00000469897 NAB1Q13506 487 aa12.25□□□□□ -0.45
CPSF4-210ENST00000469897 SETDB1Q15047 1291 aa12.25□□□□□ -0.45
CPSF4-210ENST00000469897 ACAP2Q15057 778 aa12.25□□□□□ -0.45
CPSF4-210ENST00000469897 UAP1Q16222 522 aaPredicted RBP12.25□□□□□ -0.45
CPSF4-210ENST00000469897 HYAL4Q2M3T9 481 aa12.25□□□□□ -0.45
CPSF4-210ENST00000469897 PRAMEF20Q5VT98 475 aa12.25□□□□□ -0.45
CPSF4-210ENST00000469897 RTL6Q6ICC9 239 aa12.25□□□□□ -0.45
CPSF4-210ENST00000469897 LYPD8Q6UX82 237 aa12.25□□□□□ -0.45
CPSF4-210ENST00000469897 ZCCHC7Q8N3Z6 543 aaKnown RBP12.25□□□□□ -0.45
CPSF4-210ENST00000469897 SLC22A8Q8TCC7 542 aa12.25□□□□□ -0.45
CPSF4-210ENST00000469897 RIT1Q92963 219 aa12.25□□□□□ -0.45
CPSF4-210ENST00000469897 ERVK-6Q9BXR3 956 aa12.25□□□□□ -0.45
CPSF4-210ENST00000469897 EXO5Q9H790 373 aa12.25□□□□□ -0.45
CPSF4-210ENST00000469897 IPPKQ9H8X2 491 aa12.25□□□□□ -0.45
CPSF4-210ENST00000469897 PHF11Q9UIL8 331 aa12.25□□□□□ -0.45
CPSF4-210ENST00000469897 ERVK-19Q9WJR5 959 aa12.25□□□□□ -0.45
CPSF4-210ENST00000469897 A0A096LPK6 155 aa12.24□□□□□ -0.45
CPSF4-210ENST00000469897 TRGV5A0A0B4J1U4 118 aa12.24□□□□□ -0.45
CPSF4-210ENST00000469897 ESYT3A0FGR9 886 aa12.24□□□□□ -0.45
CPSF4-210ENST00000469897 H0YIV9 168 aa12.24□□□□□ -0.45
CPSF4-210ENST00000469897 AQP7O14520 342 aa12.24□□□□□ -0.45
CPSF4-210ENST00000469897 PGRMC2O15173 223 aa12.24□□□□□ -0.45
CPSF4-210ENST00000469897 TMPRSS11DO60235 418 aa12.24□□□□□ -0.45
CPSF4-210ENST00000469897 SUSD5O60279 629 aa12.24□□□□□ -0.45
CPSF4-210ENST00000469897 OR10H2O60403 315 aa12.24□□□□□ -0.45
CPSF4-210ENST00000469897 KLHL2O95198 593 aa12.24□□□□□ -0.45
CPSF4-210ENST00000469897 SIX3O95343 332 aaPredicted RBP12.24□□□□□ -0.45
CPSF4-210ENST00000469897 GBAP04062 536 aa12.24□□□□□ -0.45
CPSF4-210ENST00000469897 FAM58BPP0C7Q3 252 aa12.24□□□□□ -0.45
CPSF4-210ENST00000469897 IGFBP2P18065 325 aa12.24□□□□□ -0.45
CPSF4-210ENST00000469897 TYK2P29597 1187 aa12.24□□□□□ -0.45
CPSF4-210ENST00000469897 BUD31P41223 144 aaPredicted RBP12.24□□□□□ -0.45
CPSF4-210ENST00000469897 PIK3CGP48736 1102 aa12.24□□□□□ -0.45
CPSF4-210ENST00000469897 ALDH18A1P54886 795 aaKnown RBP12.24□□□□□ -0.45
CPSF4-210ENST00000469897 KCNJ2P63252 427 aa12.24□□□□□ -0.45
CPSF4-210ENST00000469897 PLIN5Q00G26 463 aa12.24□□□□□ -0.45
CPSF4-210ENST00000469897 TNFRSF17Q02223 184 aa12.24□□□□□ -0.45
CPSF4-210ENST00000469897 GTF2H2Q13888 395 aa12.24□□□□□ -0.45
CPSF4-210ENST00000469897 PCBP2Q15366 365 aaKnown RBP eCLIP12.24□□□□□ -0.45
CPSF4-210ENST00000469897 WLSQ5T9L3 541 aa12.24□□□□□ -0.45
CPSF4-210ENST00000469897 MRM1Q6IN84 353 aaKnown RBP12.24□□□□□ -0.45
CPSF4-210ENST00000469897 GTF2H2CQ6P1K8 395 aa12.24□□□□□ -0.45
CPSF4-210ENST00000469897 ADGRD1Q6QNK2 874 aa12.24□□□□□ -0.45
CPSF4-210ENST00000469897 SYT10Q6XYQ8 523 aa12.24□□□□□ -0.45
CPSF4-210ENST00000469897 TMEM64Q6YI46 380 aa12.24□□□□□ -0.45
CPSF4-210ENST00000469897 B3GNT6Q6ZMB0 384 aa12.24□□□□□ -0.45
CPSF4-210ENST00000469897 GOLGA7Q7Z5G4 137 aa12.24□□□□□ -0.45
CPSF4-210ENST00000469897 LIX1LQ8IVB5 337 aa12.24□□□□□ -0.45
CPSF4-210ENST00000469897 ST13P4Q8IZP2 240 aaPredicted RBP12.24□□□□□ -0.45
CPSF4-210ENST00000469897 SLC15A4Q8N697 577 aa12.24□□□□□ -0.45
CPSF4-210ENST00000469897 FAM13CQ8NE31 585 aa12.24□□□□□ -0.45
CPSF4-210ENST00000469897 PAQR8Q8TEZ7 354 aa12.24□□□□□ -0.45
CPSF4-210ENST00000469897 FBXL20Q96IG2 436 aa12.24□□□□□ -0.45
CPSF4-210ENST00000469897 ART5Q96L15 291 aa12.24□□□□□ -0.45
CPSF4-210ENST00000469897 JSRP1Q96MG2 331 aaPredicted RBP12.24□□□□□ -0.45
CPSF4-210ENST00000469897 GPR78Q96P69 363 aa12.24□□□□□ -0.45
CPSF4-210ENST00000469897 GAL3ST4Q96RP7 486 aa12.24□□□□□ -0.45
CPSF4-210ENST00000469897 LRRC1Q9BTT6 524 aa12.24□□□□□ -0.45
CPSF4-210ENST00000469897 ZNF717Q9BY31 904 aaPredicted RBP12.24□□□□□ -0.45
CPSF4-210ENST00000469897 DDX31Q9H8H2 851 aaKnown RBP12.24□□□□□ -0.45
CPSF4-210ENST00000469897 PROK2Q9HC23 129 aa12.24□□□□□ -0.45
CPSF4-210ENST00000469897 SH2D2AQ9NP31 389 aa12.24□□□□□ -0.45
CPSF4-210ENST00000469897 SNX15Q9NRS6 342 aa12.24□□□□□ -0.45
CPSF4-210ENST00000469897 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.24□□□□□ -0.45
CPSF4-210ENST00000469897 TSC22D4Q9Y3Q8 395 aa12.24□□□□□ -0.45
CPSF4-210ENST00000469897 FAM215AQ9Y5M1 114 aa12.24□□□□□ -0.45
CPSF4-210ENST00000469897 CSMD2Q7Z408 3487 aa12.24□□□□□ -0.45
CPSF4-210ENST00000469897 A0A0A6YYD5 115 aa12.23□□□□□ -0.45
CPSF4-210ENST00000469897 A0A0G2JNJ9 132 aa12.23□□□□□ -0.45
CPSF4-210ENST00000469897 FIGNL2A6NMB9 653 aa12.23□□□□□ -0.45
CPSF4-210ENST00000469897 FOXO6A8MYZ6 492 aa12.23□□□□□ -0.45
CPSF4-210ENST00000469897 KLK8O60259 260 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms