RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 SEMA3DO95025 777 aa15.08■□□□□ 0
COL9A3-208ENST00000469802 NADKO95544 446 aaPredicted RBP15.08■□□□□ 0
COL9A3-208ENST00000469802 BUD31P41223 144 aaPredicted RBP15.08■□□□□ 0
COL9A3-208ENST00000469802 NR0B1P51843 470 aaKnown RBP15.08■□□□□ 0
COL9A3-208ENST00000469802 TRAF3Q13114 568 aa15.08■□□□□ 0
COL9A3-208ENST00000469802 ZNF750Q32MQ0 723 aa15.08■□□□□ 0
COL9A3-208ENST00000469802 OPN5Q6U736 354 aa15.08■□□□□ 0
COL9A3-208ENST00000469802 LYPD8Q6UX82 237 aa15.08■□□□□ 0
COL9A3-208ENST00000469802 RGS9BPQ6ZS82 235 aa15.08■□□□□ 0
COL9A3-208ENST00000469802 ST13P4Q8IZP2 240 aaPredicted RBP15.08■□□□□ 0
COL9A3-208ENST00000469802 MARVELD2Q8N4S9 558 aa15.08■□□□□ 0
COL9A3-208ENST00000469802 MTFMTQ96DP5 389 aaKnown RBP15.08■□□□□ 0
COL9A3-208ENST00000469802 TRIM8Q9BZR9 551 aa15.08■□□□□ 0
COL9A3-208ENST00000469802 RUBCNLQ9H714 662 aa15.08■□□□□ 0
COL9A3-208ENST00000469802 ZBTB26Q9HCK0 441 aa15.08■□□□□ 0
COL9A3-208ENST00000469802 SH2D2AQ9NP31 389 aa15.08■□□□□ 0
COL9A3-208ENST00000469802 XPR1Q9UBH6 696 aa15.08■□□□□ 0
COL9A3-208ENST00000469802 PCTPQ9UKL6 214 aa15.08■□□□□ 0
COL9A3-208ENST00000469802 TMCO1Q9UM00 188 aa15.08■□□□□ 0
COL9A3-208ENST00000469802 A0A1W2PR48 441 aa15.07■□□□□ 0
COL9A3-208ENST00000469802 ENO4A6NNW6 628 aa15.07■□□□□ 0
COL9A3-208ENST00000469802 ACOT7O00154 380 aa15.07■□□□□ 0
COL9A3-208ENST00000469802 CDC40O60508 579 aaKnown RBP eCLIP15.07■□□□□ 0
COL9A3-208ENST00000469802 CLDN9O95484 217 aa15.07■□□□□ 0
COL9A3-208ENST00000469802 AIFM1O95831 613 aa15.07■□□□□ 0
COL9A3-208ENST00000469802 TPOP07202 933 aa15.07■□□□□ 0
COL9A3-208ENST00000469802 INHBAP08476 426 aa15.07■□□□□ 0
COL9A3-208ENST00000469802 RBP1P09455 135 aa15.07■□□□□ 0
COL9A3-208ENST00000469802 CCL3P10147 92 aa15.07■□□□□ 0
COL9A3-208ENST00000469802 NR2F6P10588 404 aa15.07■□□□□ 0
COL9A3-208ENST00000469802 ALOX15P16050 662 aaPredicted RBP15.07■□□□□ 0
COL9A3-208ENST00000469802 TLX1P31314 330 aaPredicted RBP15.07■□□□□ 0
COL9A3-208ENST00000469802 SERPINB9P50453 376 aa15.07■□□□□ 0
COL9A3-208ENST00000469802 NEK2P51955 445 aa15.07■□□□□ 0
COL9A3-208ENST00000469802 PPIAP62937 165 aaKnown RBP15.07■□□□□ 0
COL9A3-208ENST00000469802 FOXO1Q12778 655 aa15.07■□□□□ 0
COL9A3-208ENST00000469802 ASPHQ12797 758 aa15.07■□□□□ 0
COL9A3-208ENST00000469802 HYAL4Q2M3T9 481 aa15.07■□□□□ 0
COL9A3-208ENST00000469802 ZNF791Q3KP31 576 aaPredicted RBP15.07■□□□□ 0
COL9A3-208ENST00000469802 PIGGQ5H8A4 983 aa15.07■□□□□ 0
COL9A3-208ENST00000469802 EMC4Q5J8M3 183 aa15.07■□□□□ 0
COL9A3-208ENST00000469802 NDUFAF5Q5TEU4 345 aa15.07■□□□□ 0
COL9A3-208ENST00000469802 ADGRD1Q6QNK2 874 aa15.07■□□□□ 0
COL9A3-208ENST00000469802 GK5Q6ZS86 529 aa15.07■□□□□ 0
COL9A3-208ENST00000469802 GDF7Q7Z4P5 450 aa15.07■□□□□ 0
COL9A3-208ENST00000469802 NUDT13Q86X67 352 aa15.07■□□□□ 0
COL9A3-208ENST00000469802 SRRM1Q8IYB3 904 aaKnown RBP15.07■□□□□ 0
COL9A3-208ENST00000469802 DCAKDQ8WVC6 231 aa15.07■□□□□ 0
COL9A3-208ENST00000469802 RBM18Q96H35 190 aaKnown RBP15.07■□□□□ 0
COL9A3-208ENST00000469802 ART5Q96L15 291 aa15.07■□□□□ 0
COL9A3-208ENST00000469802 CDK15Q96Q40 435 aa15.07■□□□□ 0
COL9A3-208ENST00000469802 FAM173AQ9BQD7 235 aa15.07■□□□□ 0
COL9A3-208ENST00000469802 PELOQ9BRX2 385 aaKnown RBP15.07■□□□□ 0
COL9A3-208ENST00000469802 NTMT1Q9BV86 223 aa15.07■□□□□ 0
COL9A3-208ENST00000469802 NOL11Q9H8H0 719 aaKnown RBP15.07■□□□□ 0
COL9A3-208ENST00000469802 PRM3Q9NNZ6 103 aa15.07■□□□□ 0
COL9A3-208ENST00000469802 ZNF180Q9UJW8 692 aa15.07■□□□□ 0
COL9A3-208ENST00000469802 FREM3P0C091 2139 aa15.07■□□□□ 0
COL9A3-208ENST00000469802 NINQ8N4C6 2090 aa15.06■□□□□ 0
COL9A3-208ENST00000469802 FAM166BA8MTA8 275 aa15.06■□□□□ 0
COL9A3-208ENST00000469802 G3V3Y1 287 aa15.06■□□□□ 0
COL9A3-208ENST00000469802 GPR75O95800 540 aa15.06■□□□□ 0
COL9A3-208ENST00000469802 IGHG3P01860 377 aa15.06■□□□□ 0
COL9A3-208ENST00000469802 CLPSP04118 112 aa15.06■□□□□ 0
COL9A3-208ENST00000469802 RPS17P08708 135 aaKnown RBP15.06■□□□□ 0
COL9A3-208ENST00000469802 FAM58BPP0C7Q3 252 aa15.06■□□□□ 0
COL9A3-208ENST00000469802 COL6A2P12110 1019 aa15.06■□□□□ 0
COL9A3-208ENST00000469802 COX6B1P14854 86 aa15.06■□□□□ 0
COL9A3-208ENST00000469802 CNR1P21554 472 aa15.06■□□□□ 0
COL9A3-208ENST00000469802 GALNSP34059 522 aa15.06■□□□□ 0
COL9A3-208ENST00000469802 TSNAXIP1Q2TAA8 658 aa15.06■□□□□ 0
COL9A3-208ENST00000469802 GGTA1PQ4G0N0 100 aa15.06■□□□□ 0
COL9A3-208ENST00000469802 C10orf62Q5T681 223 aaPredicted RBP15.06■□□□□ 0
COL9A3-208ENST00000469802 TAOK1Q7L7X3 1001 aa15.06■□□□□ 0
COL9A3-208ENST00000469802 SLC22A16Q86VW1 577 aa15.06■□□□□ 0
COL9A3-208ENST00000469802 SLC15A4Q8N697 577 aa15.06■□□□□ 0
COL9A3-208ENST00000469802 PPWD1Q96BP3 646 aaKnown RBP15.06■□□□□ 0
COL9A3-208ENST00000469802 SPACA9Q96E40 222 aaPredicted RBP15.06■□□□□ 0
COL9A3-208ENST00000469802 NSUN5Q96P11 429 aaKnown RBP15.06■□□□□ 0
COL9A3-208ENST00000469802 SERPINI1Q99574 410 aa15.06■□□□□ 0
COL9A3-208ENST00000469802 TP63Q9H3D4 680 aaPredicted RBP15.06■□□□□ 0
COL9A3-208ENST00000469802 IL1RL2Q9HB29 575 aa15.06■□□□□ 0
COL9A3-208ENST00000469802 SACM1LQ9NTJ5 587 aa15.06■□□□□ 0
COL9A3-208ENST00000469802 RYDENQ9NUL5 291 aaKnown RBP15.06■□□□□ 0
COL9A3-208ENST00000469802 LIPGQ9Y5X9 500 aa15.06■□□□□ 0
COL9A3-208ENST00000469802 TACC2O95359 2948 aa15.06■□□□□ 0
COL9A3-208ENST00000469802 GLOD5A6NK44 160 aa15.05■□□□□ -0
COL9A3-208ENST00000469802 WASHC1A8K0Z3 465 aa15.05■□□□□ -0
COL9A3-208ENST00000469802 DYRK3O43781 588 aa15.05■□□□□ -0
COL9A3-208ENST00000469802 KRT38O76015 456 aa15.05■□□□□ -0
COL9A3-208ENST00000469802 SBK3P0C264 359 aa15.05■□□□□ -0
COL9A3-208ENST00000469802 CNTFP26441 200 aa15.05■□□□□ -0
COL9A3-208ENST00000469802 KIR3DL1P43629 444 aa15.05■□□□□ -0
COL9A3-208ENST00000469802 CCNG1P51959 295 aa15.05■□□□□ -0
COL9A3-208ENST00000469802 SLC37A1P57057 533 aa15.05■□□□□ -0
COL9A3-208ENST00000469802 HERVK_113P63132 956 aa15.05■□□□□ -0
COL9A3-208ENST00000469802 ERVK-8P63133 956 aa15.05■□□□□ -0
COL9A3-208ENST00000469802 PLGLB1Q02325 96 aa15.05■□□□□ -0
COL9A3-208ENST00000469802 EBPQ15125 230 aaKnown RBP15.05■□□□□ -0
COL9A3-208ENST00000469802 GLE1Q53GS7 698 aaKnown RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms