RNA–Protein interactions for RNA: ENST00000469087.1

RUNX1-213, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,790 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-213ENST00000469087 LIMK1P53667 647 aa12.07□□□□□ -0.48
RUNX1-213ENST00000469087 BTG2P78543 158 aa12.07□□□□□ -0.48
RUNX1-213ENST00000469087 FOLH1Q04609 750 aa12.07□□□□□ -0.48
RUNX1-213ENST00000469087 HSPB3Q12988 150 aa12.07□□□□□ -0.48
RUNX1-213ENST00000469087 GAB1Q13480 694 aa12.07□□□□□ -0.48
RUNX1-213ENST00000469087 ARHGAP24Q8N264 748 aa12.07□□□□□ -0.48
RUNX1-213ENST00000469087 FAM13CQ8NE31 585 aa12.07□□□□□ -0.48
RUNX1-213ENST00000469087 OR8J3Q8NGG0 315 aa12.07□□□□□ -0.48
RUNX1-213ENST00000469087 PMEPA1Q969W9 287 aa12.07□□□□□ -0.48
RUNX1-213ENST00000469087 COL26A1Q96A83 441 aa12.07□□□□□ -0.48
RUNX1-213ENST00000469087 TBC1D20Q96BZ9 403 aa12.07□□□□□ -0.48
RUNX1-213ENST00000469087 THUMPD3Q9BV44 507 aaKnown RBP12.07□□□□□ -0.48
RUNX1-213ENST00000469087 CXorf36Q9H7Y0 433 aa12.07□□□□□ -0.48
RUNX1-213ENST00000469087 SLC22A11Q9NSA0 550 aa12.07□□□□□ -0.48
RUNX1-213ENST00000469087 SIRT3Q9NTG7 399 aaPredicted RBP12.07□□□□□ -0.48
RUNX1-213ENST00000469087 VPS4AQ9UN37 437 aa12.07□□□□□ -0.48
RUNX1-213ENST00000469087 ENTPD4Q9Y227 616 aa12.07□□□□□ -0.48
RUNX1-213ENST00000469087 L3MBTL1Q9Y468 752 aa12.07□□□□□ -0.48
RUNX1-213ENST00000469087 MAP4K5Q9Y4K4 846 aa12.07□□□□□ -0.48
RUNX1-213ENST00000469087 PCDHB3Q9Y5E6 796 aa12.07□□□□□ -0.48
RUNX1-213ENST00000469087 ZNF780BQ9Y6R6 833 aa12.07□□□□□ -0.48
RUNX1-213ENST00000469087 SPAARA0A1B0GVQ0 90 aa12.06□□□□□ -0.48
RUNX1-213ENST00000469087 CSO75390 466 aaKnown RBP12.06□□□□□ -0.48
RUNX1-213ENST00000469087 GPR75O95800 540 aa12.06□□□□□ -0.48
RUNX1-213ENST00000469087 ZNF28P17035 718 aa12.06□□□□□ -0.48
RUNX1-213ENST00000469087 NTSP30990 170 aa12.06□□□□□ -0.48
RUNX1-213ENST00000469087 CDK9P50750 372 aaKnown RBP12.06□□□□□ -0.48
RUNX1-213ENST00000469087 MS4A2Q01362 244 aa12.06□□□□□ -0.48
RUNX1-213ENST00000469087 DSG2Q14126 1118 aa12.06□□□□□ -0.48
RUNX1-213ENST00000469087 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.06□□□□□ -0.48
RUNX1-213ENST00000469087 SAMD4BQ5PRF9 694 aaKnown RBP12.06□□□□□ -0.48
RUNX1-213ENST00000469087 C10orf111Q8N326 155 aa12.06□□□□□ -0.48
RUNX1-213ENST00000469087 OR5AK3PQ8NH89 298 aa12.06□□□□□ -0.48
RUNX1-213ENST00000469087 PSMA8Q8TAA3 256 aa12.06□□□□□ -0.48
RUNX1-213ENST00000469087 ZFP90Q8TF47 636 aa12.06□□□□□ -0.48
RUNX1-213ENST00000469087 CLIP3Q96DZ5 547 aa12.06□□□□□ -0.48
RUNX1-213ENST00000469087 CPPED1Q9BRF8 314 aaPredicted RBP12.06□□□□□ -0.48
RUNX1-213ENST00000469087 YIPF2Q9BWQ6 316 aa12.06□□□□□ -0.48
RUNX1-213ENST00000469087 PIF1Q9H611 641 aa12.06□□□□□ -0.48
RUNX1-213ENST00000469087 TPT1P8Q9HAU6 139 aa12.06□□□□□ -0.48
RUNX1-213ENST00000469087 TRPC4Q9UBN4 977 aa12.06□□□□□ -0.48
RUNX1-213ENST00000469087 USP22Q9UPT9 525 aa12.06□□□□□ -0.48
RUNX1-213ENST00000469087 CLDN16Q9Y5I7 305 aa12.06□□□□□ -0.48
RUNX1-213ENST00000469087 C15orf38-AP3S2A0A0A6YYH1 394 aa12.05□□□□□ -0.48
RUNX1-213ENST00000469087 PMS2P1A4D2B8 440 aa12.05□□□□□ -0.48
RUNX1-213ENST00000469087 B4E171 279 aa12.05□□□□□ -0.48
RUNX1-213ENST00000469087 TMX2-CTNND1H3BSU7 103 aa12.05□□□□□ -0.48
RUNX1-213ENST00000469087 CTNSO60931 367 aa12.05□□□□□ -0.48
RUNX1-213ENST00000469087 DKK1O94907 266 aa12.05□□□□□ -0.48
RUNX1-213ENST00000469087 PORP16435 677 aaPredicted RBP12.05□□□□□ -0.48
RUNX1-213ENST00000469087 GPX2P18283 190 aa12.05□□□□□ -0.48
RUNX1-213ENST00000469087 ME2P23368 584 aa12.05□□□□□ -0.48
RUNX1-213ENST00000469087 ETV5P41161 510 aa12.05□□□□□ -0.48
RUNX1-213ENST00000469087 TSPAN7P41732 249 aa12.05□□□□□ -0.48
RUNX1-213ENST00000469087 LIPEQ05469 1076 aa12.05□□□□□ -0.48
RUNX1-213ENST00000469087 ABHD18Q0P651 414 aa12.05□□□□□ -0.48
RUNX1-213ENST00000469087 VWA2Q5GFL6 755 aa12.05□□□□□ -0.48
RUNX1-213ENST00000469087 ZNF385CQ66K41 422 aaPredicted RBP12.05□□□□□ -0.48
RUNX1-213ENST00000469087 RAB11FIP2Q7L804 512 aa12.05□□□□□ -0.48
RUNX1-213ENST00000469087 ARPINQ7Z6K5 226 aa12.05□□□□□ -0.48
RUNX1-213ENST00000469087 IFNEQ86WN2 208 aa12.05□□□□□ -0.48
RUNX1-213ENST00000469087 ZNF595Q8IYB9 648 aa12.05□□□□□ -0.48
RUNX1-213ENST00000469087 ADCY4Q8NFM4 1077 aa12.05□□□□□ -0.48
RUNX1-213ENST00000469087 OR10A6Q8NH74 314 aa12.05□□□□□ -0.48
RUNX1-213ENST00000469087 WDR60Q8WVS4 1066 aa12.05□□□□□ -0.48
RUNX1-213ENST00000469087 CCDC124Q96CT7 223 aaKnown RBP12.05□□□□□ -0.48
RUNX1-213ENST00000469087 ZNF583Q96ND8 569 aa12.05□□□□□ -0.48
RUNX1-213ENST00000469087 SH3GL1Q99961 368 aa12.05□□□□□ -0.48
RUNX1-213ENST00000469087 SLC35A5Q9BS91 424 aa12.05□□□□□ -0.48
RUNX1-213ENST00000469087 TMEM121BQ9BXQ6 578 aaPredicted RBP12.05□□□□□ -0.48
RUNX1-213ENST00000469087 STRADBQ9C0K7 418 aa12.05□□□□□ -0.48
RUNX1-213ENST00000469087 KAT8Q9H7Z6 458 aaKnown RBP12.05□□□□□ -0.48
RUNX1-213ENST00000469087 AKIRIN1Q9H9L7 192 aaPredicted RBP12.05□□□□□ -0.48
RUNX1-213ENST00000469087 LANCL2Q9NS86 450 aa12.05□□□□□ -0.48
RUNX1-213ENST00000469087 GIMAP4Q9NUV9 329 aa12.05□□□□□ -0.48
RUNX1-213ENST00000469087 GPATCH2Q9NW75 528 aa12.05□□□□□ -0.48
RUNX1-213ENST00000469087 SLC39A1Q9NY26 324 aa12.05□□□□□ -0.48
RUNX1-213ENST00000469087 AKAP7Q9P0M2 348 aaPredicted RBP12.05□□□□□ -0.48
RUNX1-213ENST00000469087 ZNF282Q9UDV7 671 aaPredicted RBP12.05□□□□□ -0.48
RUNX1-213ENST00000469087 ACSL6Q9UKU0 697 aa12.05□□□□□ -0.48
RUNX1-213ENST00000469087 POMPQ9Y244 141 aa12.05□□□□□ -0.48
RUNX1-213ENST00000469087 LOXL2Q9Y4K0 774 aa12.05□□□□□ -0.48
RUNX1-213ENST00000469087 SNX8Q9Y5X2 465 aa12.05□□□□□ -0.48
RUNX1-213ENST00000469087 GMEB1Q9Y692 573 aa12.05□□□□□ -0.48
RUNX1-213ENST00000469087 CFAP54Q96N23 3096 aa12.05□□□□□ -0.48
RUNX1-213ENST00000469087 RIF1Q5UIP0 2472 aaKnown RBP12.05□□□□□ -0.48
RUNX1-213ENST00000469087 A0A1W2PNU3 283 aaPredicted RBP12.05□□□□□ -0.48
RUNX1-213ENST00000469087 A8MUI8 341 aa12.05□□□□□ -0.48
RUNX1-213ENST00000469087 TGFBR3LH3BV60 316 aa12.05□□□□□ -0.48
RUNX1-213ENST00000469087 CLDN4O14493 209 aa12.05□□□□□ -0.48
RUNX1-213ENST00000469087 BMP10O95393 424 aa12.05□□□□□ -0.48
RUNX1-213ENST00000469087 FHP07954 510 aa12.05□□□□□ -0.48
RUNX1-213ENST00000469087 CPMP14384 443 aa12.05□□□□□ -0.48
RUNX1-213ENST00000469087 FBLP22087 321 aaKnown RBP12.05□□□□□ -0.48
RUNX1-213ENST00000469087 UQCRC2P22695 453 aa12.05□□□□□ -0.48
RUNX1-213ENST00000469087 GPC1P35052 558 aa12.05□□□□□ -0.48
RUNX1-213ENST00000469087 SOX18P35713 384 aa12.05□□□□□ -0.48
RUNX1-213ENST00000469087 GSK3BP49841 420 aa12.05□□□□□ -0.48
RUNX1-213ENST00000469087 GZMMP51124 257 aa12.05□□□□□ -0.48
RUNX1-213ENST00000469087 MVDP53602 400 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms