RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 CAPRIN1Q14444 709 aaKnown RBP16.45■□□□□ 0.22
RPL39-202ENST00000468844 RSPO4Q2I0M5 234 aaPredicted RBP16.45■□□□□ 0.22
RPL39-202ENST00000468844 GTDC1Q4AE62 458 aa16.45■□□□□ 0.22
RPL39-202ENST00000468844 LRIF1Q5T3J3 769 aa16.45■□□□□ 0.22
RPL39-202ENST00000468844 ZNF551Q7Z340 670 aaPredicted RBP16.45■□□□□ 0.22
RPL39-202ENST00000468844 MSRB3Q8IXL7 192 aa16.45■□□□□ 0.22
RPL39-202ENST00000468844 OR4K14Q8NGD5 310 aa16.45■□□□□ 0.22
RPL39-202ENST00000468844 ADAMTS14Q8WXS8 1223 aa16.45■□□□□ 0.22
RPL39-202ENST00000468844 ZBED6CLQ96FA7 236 aaPredicted RBP16.45■□□□□ 0.22
RPL39-202ENST00000468844 DDA1Q9BW61 102 aa16.45■□□□□ 0.22
RPL39-202ENST00000468844 ASPSCR1Q9BZE9 553 aa16.45■□□□□ 0.22
RPL39-202ENST00000468844 GLIPR2Q9H4G4 154 aa16.45■□□□□ 0.22
RPL39-202ENST00000468844 SLC25A37Q9NYZ2 338 aa16.45■□□□□ 0.22
RPL39-202ENST00000468844 ENTPD4Q9Y227 616 aa16.45■□□□□ 0.22
RPL39-202ENST00000468844 PCDHB14Q9Y5E9 798 aa16.45■□□□□ 0.22
RPL39-202ENST00000468844 CLDN16Q9Y5I7 305 aa16.45■□□□□ 0.22
RPL39-202ENST00000468844 CFAP47Q6ZTR5 3102 aa16.45■□□□□ 0.22
RPL39-202ENST00000468844 TRBV5-3A0A0A0MS03 114 aa16.45■□□□□ 0.22
RPL39-202ENST00000468844 TEX51A0A1B0GUA7 166 aa16.45■□□□□ 0.22
RPL39-202ENST00000468844 VGLL3A8MV65 326 aa16.45■□□□□ 0.22
RPL39-202ENST00000468844 C9orf172C9J069 976 aa16.45■□□□□ 0.22
RPL39-202ENST00000468844 TGFBR3LH3BV60 316 aa16.45■□□□□ 0.22
RPL39-202ENST00000468844 GYG2O15488 501 aa16.45■□□□□ 0.22
RPL39-202ENST00000468844 CPSF4O95639 269 aaKnown RBP16.45■□□□□ 0.22
RPL39-202ENST00000468844 ONECUT2O95948 504 aa16.45■□□□□ 0.22
RPL39-202ENST00000468844 ABCB1P08183 1280 aaPredicted RBP16.45■□□□□ 0.22
RPL39-202ENST00000468844 XKP51811 444 aa16.45■□□□□ 0.22
RPL39-202ENST00000468844 EFNA3P52797 238 aa16.45■□□□□ 0.22
RPL39-202ENST00000468844 MANFP55145 182 aaKnown RBP16.45■□□□□ 0.22
RPL39-202ENST00000468844 BTG2P78543 158 aa16.45■□□□□ 0.22
RPL39-202ENST00000468844 LCN10Q6JVE6 187 aa16.45■□□□□ 0.22
RPL39-202ENST00000468844 MED25Q71SY5 747 aa16.45■□□□□ 0.22
RPL39-202ENST00000468844 ZC3H7AQ8IWR0 971 aaKnown RBP16.45■□□□□ 0.22
RPL39-202ENST00000468844 CCDC116Q8IYX3 515 aa16.45■□□□□ 0.22
RPL39-202ENST00000468844 DEFB107AQ8IZN7 70 aa16.45■□□□□ 0.22
RPL39-202ENST00000468844 KIF2BQ8N4N8 673 aa16.45■□□□□ 0.22
RPL39-202ENST00000468844 ANKRD9Q96BM1 317 aaPredicted RBP16.45■□□□□ 0.22
RPL39-202ENST00000468844 LRFN5Q96NI6 719 aa16.45■□□□□ 0.22
RPL39-202ENST00000468844 AMDHD1Q96NU7 426 aa16.45■□□□□ 0.22
RPL39-202ENST00000468844 BBS4Q96RK4 519 aa16.45■□□□□ 0.22
RPL39-202ENST00000468844 GPATCH1Q9BRR8 931 aaKnown RBP16.45■□□□□ 0.22
RPL39-202ENST00000468844 ZPBPQ9BS86 351 aa16.45■□□□□ 0.22
RPL39-202ENST00000468844 TRIM8Q9BZR9 551 aa16.45■□□□□ 0.22
RPL39-202ENST00000468844 MKKSQ9NPJ1 570 aaPredicted RBP16.45■□□□□ 0.22
RPL39-202ENST00000468844 ACSS1Q9NUB1 689 aaPredicted RBP16.45■□□□□ 0.22
RPL39-202ENST00000468844 DLL3Q9NYJ7 618 aa16.45■□□□□ 0.22
RPL39-202ENST00000468844 PCDHGA7Q9Y5G6 932 aa16.45■□□□□ 0.22
RPL39-202ENST00000468844 ZNF780BQ9Y6R6 833 aa16.45■□□□□ 0.22
RPL39-202ENST00000468844 IGLV3-12A0A075B6K2 115 aa16.44■□□□□ 0.22
RPL39-202ENST00000468844 A0A096LPI6 279 aa16.44■□□□□ 0.22
RPL39-202ENST00000468844 BLACEA4D250 179 aa16.44■□□□□ 0.22
RPL39-202ENST00000468844 ERN1O75460 977 aaKnown RBP16.44■□□□□ 0.22
RPL39-202ENST00000468844 GPR75O95800 540 aa16.44■□□□□ 0.22
RPL39-202ENST00000468844 NPPAP01160 153 aa16.44■□□□□ 0.22
RPL39-202ENST00000468844 NTSP30990 170 aa16.44■□□□□ 0.22
RPL39-202ENST00000468844 PTGER1P34995 402 aa16.44■□□□□ 0.22
RPL39-202ENST00000468844 NCBP2P52298 156 aaKnown RBP eCLIP16.44■□□□□ 0.22
RPL39-202ENST00000468844 LRRC74AQ0VAA2 488 aa16.44■□□□□ 0.22
RPL39-202ENST00000468844 HSPB3Q12988 150 aa16.44■□□□□ 0.22
RPL39-202ENST00000468844 SLC13A2Q13183 592 aa16.44■□□□□ 0.22
RPL39-202ENST00000468844 MLC1Q15049 377 aa16.44■□□□□ 0.22
RPL39-202ENST00000468844 ZNF517Q6ZMY9 492 aaPredicted RBP16.44■□□□□ 0.22
RPL39-202ENST00000468844 PGAM4Q8N0Y7 254 aa16.44■□□□□ 0.22
RPL39-202ENST00000468844 OR4A15Q8NGL6 344 aa16.44■□□□□ 0.22
RPL39-202ENST00000468844 GOT1L1Q8NHS2 421 aaPredicted RBP16.44■□□□□ 0.22
RPL39-202ENST00000468844 TRIM4Q9C037 500 aa16.44■□□□□ 0.22
RPL39-202ENST00000468844 PRTFDC1Q9NRG1 225 aa16.44■□□□□ 0.22
RPL39-202ENST00000468844 GID8Q9NWU2 228 aa16.44■□□□□ 0.22
RPL39-202ENST00000468844 TAS2R9Q9NYW1 312 aa16.44■□□□□ 0.22
RPL39-202ENST00000468844 ZNF282Q9UDV7 671 aaPredicted RBP16.44■□□□□ 0.22
RPL39-202ENST00000468844 CROTQ9UKG9 612 aa16.44■□□□□ 0.22
RPL39-202ENST00000468844 PCDHGA3Q9Y5H0 932 aa16.44■□□□□ 0.22
RPL39-202ENST00000468844 FRYQ5TBA9 3013 aa16.43■□□□□ 0.22
RPL39-202ENST00000468844 CTNSO60931 367 aa16.43■□□□□ 0.22
RPL39-202ENST00000468844 STK17BO94768 372 aa16.43■□□□□ 0.22
RPL39-202ENST00000468844 ANP32DO95626 131 aa16.43■□□□□ 0.22
RPL39-202ENST00000468844 CPMP14384 443 aa16.43■□□□□ 0.22
RPL39-202ENST00000468844 CSNK2A2P19784 350 aaPredicted RBP16.43■□□□□ 0.22
RPL39-202ENST00000468844 MAOAP21397 527 aa16.43■□□□□ 0.22
RPL39-202ENST00000468844 SLC6A2P23975 617 aa16.43■□□□□ 0.22
RPL39-202ENST00000468844 TRPC1P48995 793 aa16.43■□□□□ 0.22
RPL39-202ENST00000468844 HSD17B7P56937 341 aa16.43■□□□□ 0.22
RPL39-202ENST00000468844 FOXL2P58012 376 aa16.43■□□□□ 0.22
RPL39-202ENST00000468844 GAB1Q13480 694 aa16.43■□□□□ 0.22
RPL39-202ENST00000468844 C16orf89Q6UX73 402 aa16.43■□□□□ 0.22
RPL39-202ENST00000468844 SCUBE1Q8IWY4 988 aa16.43■□□□□ 0.22
RPL39-202ENST00000468844 AURKBQ96GD4 344 aaPredicted RBP16.43■□□□□ 0.22
RPL39-202ENST00000468844 CGREF1Q99674 301 aa16.43■□□□□ 0.22
RPL39-202ENST00000468844 CADM1Q9BY67 442 aaKnown RBP16.43■□□□□ 0.22
RPL39-202ENST00000468844 NEUROD4Q9HD90 331 aa16.43■□□□□ 0.22
RPL39-202ENST00000468844 GIMAP4Q9NUV9 329 aa16.43■□□□□ 0.22
RPL39-202ENST00000468844 NDE1Q9NXR1 346 aa16.43■□□□□ 0.22
RPL39-202ENST00000468844 FOXJ2Q9P0K8 574 aa16.43■□□□□ 0.22
RPL39-202ENST00000468844 NINQ8N4C6 2090 aa16.43■□□□□ 0.22
RPL39-202ENST00000468844 MYOCOSA0A1B0GUC4 107 aa16.43■□□□□ 0.22
RPL39-202ENST00000468844 CLDN4O14493 209 aa16.43■□□□□ 0.22
RPL39-202ENST00000468844 MGRN1O60291 552 aa16.43■□□□□ 0.22
RPL39-202ENST00000468844 C1QCP02747 245 aa16.43■□□□□ 0.22
RPL39-202ENST00000468844 IL10P22301 178 aa16.43■□□□□ 0.22
RPL39-202ENST00000468844 PPP2R1BP30154 601 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms