RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 WDR55Q9H6Y2 383 aaPredicted RBP13.56□□□□□ -0.24
COL27A1-203ENST00000468565 MMP25Q9NPA2 562 aa13.56□□□□□ -0.24
COL27A1-203ENST00000468565 PRDM9Q9NQV7 894 aa13.56□□□□□ -0.24
COL27A1-203ENST00000468565 TEKT2Q9UIF3 430 aa13.56□□□□□ -0.24
COL27A1-203ENST00000468565 IGKV3D-11A0A0A0MRZ8 115 aa13.56□□□□□ -0.24
COL27A1-203ENST00000468565 LOC100653049A0A140TA62 436 aa13.56□□□□□ -0.24
COL27A1-203ENST00000468565 B3GALT2O43825 422 aa13.56□□□□□ -0.24
COL27A1-203ENST00000468565 PRMT3O60678 531 aa13.56□□□□□ -0.24
COL27A1-203ENST00000468565 KRT34O76011 436 aa13.56□□□□□ -0.24
COL27A1-203ENST00000468565 GFAPP14136 432 aa13.56□□□□□ -0.24
COL27A1-203ENST00000468565 PIK3R1P27986 724 aa13.56□□□□□ -0.24
COL27A1-203ENST00000468565 SERPINB1P30740 379 aa13.56□□□□□ -0.24
COL27A1-203ENST00000468565 OR4D2P58180 307 aa13.56□□□□□ -0.24
COL27A1-203ENST00000468565 TGM3Q08188 693 aa13.56□□□□□ -0.24
COL27A1-203ENST00000468565 PCBP2Q15366 365 aaKnown RBP eCLIP13.56□□□□□ -0.24
COL27A1-203ENST00000468565 NXNQ6DKJ4 435 aa13.56□□□□□ -0.24
COL27A1-203ENST00000468565 ADNP2Q6IQ32 1131 aa13.56□□□□□ -0.24
COL27A1-203ENST00000468565 RPUSD3Q6P087 351 aaKnown RBP13.56□□□□□ -0.24
COL27A1-203ENST00000468565 ABHD17CQ6PCB6 329 aa13.56□□□□□ -0.24
COL27A1-203ENST00000468565 AAGABQ6PD74 315 aa13.56□□□□□ -0.24
COL27A1-203ENST00000468565 FRMD7Q6ZUT3 714 aa13.56□□□□□ -0.24
COL27A1-203ENST00000468565 CISD2Q8N5K1 135 aaKnown RBP13.56□□□□□ -0.24
COL27A1-203ENST00000468565 DNAJC9Q8WXX5 260 aa13.56□□□□□ -0.24
COL27A1-203ENST00000468565 PTCHD1Q96NR3 888 aa13.56□□□□□ -0.24
COL27A1-203ENST00000468565 SERINC2Q96SA4 455 aa13.56□□□□□ -0.24
COL27A1-203ENST00000468565 SHCBP1LQ9BZQ2 653 aa13.56□□□□□ -0.24
COL27A1-203ENST00000468565 BATF3Q9NR55 127 aa13.56□□□□□ -0.24
COL27A1-203ENST00000468565 MRGBPQ9NV56 204 aa13.56□□□□□ -0.24
COL27A1-203ENST00000468565 ASF1BQ9NVP2 202 aa13.56□□□□□ -0.24
COL27A1-203ENST00000468565 MAP10Q9P2G4 905 aa13.56□□□□□ -0.24
COL27A1-203ENST00000468565 TMCO1Q9UM00 188 aa13.56□□□□□ -0.24
COL27A1-203ENST00000468565 MMACHCQ9Y4U1 282 aa13.56□□□□□ -0.24
COL27A1-203ENST00000468565 TNPO3Q9Y5L0 923 aaKnown RBP13.56□□□□□ -0.24
COL27A1-203ENST00000468565 COPG1Q9Y678 874 aaKnown RBP13.56□□□□□ -0.24
COL27A1-203ENST00000468565 A8MT66 165 aa13.55□□□□□ -0.24
COL27A1-203ENST00000468565 ACADSP16219 412 aa13.55□□□□□ -0.24
COL27A1-203ENST00000468565 ATP6V1C1P21283 382 aa13.55□□□□□ -0.24
COL27A1-203ENST00000468565 GNLYP22749 145 aa13.55□□□□□ -0.24
COL27A1-203ENST00000468565 EPHA3P29320 983 aa13.55□□□□□ -0.24
COL27A1-203ENST00000468565 UQCRFS1P47985 274 aa13.55□□□□□ -0.24
COL27A1-203ENST00000468565 MTTPP55157 894 aa13.55□□□□□ -0.24
COL27A1-203ENST00000468565 RAB38P57729 211 aa13.55□□□□□ -0.24
COL27A1-203ENST00000468565 BTKQ06187 659 aa13.55□□□□□ -0.24
COL27A1-203ENST00000468565 RUNX2Q13950 521 aa13.55□□□□□ -0.24
COL27A1-203ENST00000468565 PDCD2Q16342 344 aaPredicted RBP13.55□□□□□ -0.24
COL27A1-203ENST00000468565 PFKFB4Q16877 469 aa13.55□□□□□ -0.24
COL27A1-203ENST00000468565 SH2D4BQ5SQS7 431 aa13.55□□□□□ -0.24
COL27A1-203ENST00000468565 ABHD17BQ5VST6 288 aa13.55□□□□□ -0.24
COL27A1-203ENST00000468565 GRHL2Q6ISB3 625 aa13.55□□□□□ -0.24
COL27A1-203ENST00000468565 MED27Q6P2C8 311 aa13.55□□□□□ -0.24
COL27A1-203ENST00000468565 DEFB107AQ8IZN7 70 aa13.55□□□□□ -0.24
COL27A1-203ENST00000468565 SRFBP1Q8NEF9 429 aaKnown RBP13.55□□□□□ -0.24
COL27A1-203ENST00000468565 RP9Q8TA86 221 aaKnown RBP13.55□□□□□ -0.24
COL27A1-203ENST00000468565 JADE3Q92613 823 aa13.55□□□□□ -0.24
COL27A1-203ENST00000468565 C19orf60Q96EN9 201 aa13.55□□□□□ -0.24
COL27A1-203ENST00000468565 MS4A8Q9BY19 250 aa13.55□□□□□ -0.24
COL27A1-203ENST00000468565 ADGRE2Q9UHX3 823 aa13.55□□□□□ -0.24
COL27A1-203ENST00000468565 ANGPTL3Q9Y5C1 460 aa13.55□□□□□ -0.24
COL27A1-203ENST00000468565 HIVEP3Q5T1R4 2406 aa13.55□□□□□ -0.24
COL27A1-203ENST00000468565 ZGRF1Q86YA3 2104 aa13.55□□□□□ -0.24
COL27A1-203ENST00000468565 SVILO95425 2214 aa13.55□□□□□ -0.24
COL27A1-203ENST00000468565 TRAV17A0A0B4J275 112 aa13.54□□□□□ -0.24
COL27A1-203ENST00000468565 A0A0G2JN53 185 aa13.54□□□□□ -0.24
COL27A1-203ENST00000468565 TCRBV16S1A1N1A0A5B0 115 aa13.54□□□□□ -0.24
COL27A1-203ENST00000468565 TNFSF10P50591 281 aa13.54□□□□□ -0.24
COL27A1-203ENST00000468565 PLA2G16P53816 162 aa13.54□□□□□ -0.24
COL27A1-203ENST00000468565 SLC26A5P58743 744 aa13.54□□□□□ -0.24
COL27A1-203ENST00000468565 BTG2P78543 158 aa13.54□□□□□ -0.24
COL27A1-203ENST00000468565 TBL3Q12788 808 aaKnown RBP13.54□□□□□ -0.24
COL27A1-203ENST00000468565 PGM2L1Q6PCE3 622 aa13.54□□□□□ -0.24
COL27A1-203ENST00000468565 C16orf89Q6UX73 402 aa13.54□□□□□ -0.24
COL27A1-203ENST00000468565 FAM26EQ8N5C1 309 aa13.54□□□□□ -0.24
COL27A1-203ENST00000468565 OR7G3Q8NG95 312 aa13.54□□□□□ -0.24
COL27A1-203ENST00000468565 PPP1R36Q96LQ0 422 aa13.54□□□□□ -0.24
COL27A1-203ENST00000468565 ZNF354BQ96LW1 612 aa13.54□□□□□ -0.24
COL27A1-203ENST00000468565 KCNC2Q96PR1 638 aa13.54□□□□□ -0.24
COL27A1-203ENST00000468565 TRMOQ9BU70 441 aa13.54□□□□□ -0.24
COL27A1-203ENST00000468565 ROGDIQ9GZN7 287 aa13.54□□□□□ -0.24
COL27A1-203ENST00000468565 COPS7BQ9H9Q2 264 aaPredicted RBP13.54□□□□□ -0.24
COL27A1-203ENST00000468565 AGPAT4Q9NRZ5 378 aa13.54□□□□□ -0.24
COL27A1-203ENST00000468565 NMRK1Q9NWW6 199 aa13.54□□□□□ -0.24
COL27A1-203ENST00000468565 TSC22D4Q9Y3Q8 395 aa13.54□□□□□ -0.24
COL27A1-203ENST00000468565 PTPN13Q12923 2485 aa13.54□□□□□ -0.24
COL27A1-203ENST00000468565 SYNDIG1LA6NDD5 238 aa13.54□□□□□ -0.24
COL27A1-203ENST00000468565 FAM227AF5H4B4 570 aa13.54□□□□□ -0.24
COL27A1-203ENST00000468565 UGDHO60701 494 aa13.54□□□□□ -0.24
COL27A1-203ENST00000468565 SMIM24O75264 130 aa13.54□□□□□ -0.24
COL27A1-203ENST00000468565 ANPEPP15144 967 aa13.54□□□□□ -0.24
COL27A1-203ENST00000468565 PIK3CGP48736 1102 aa13.54□□□□□ -0.24
COL27A1-203ENST00000468565 HSD17B7P56937 341 aa13.54□□□□□ -0.24
COL27A1-203ENST00000468565 GALNT1Q10472 559 aaPredicted RBP13.54□□□□□ -0.24
COL27A1-203ENST00000468565 CYLC2Q14093 348 aaPredicted RBP13.54□□□□□ -0.24
COL27A1-203ENST00000468565 TMEM35AQ53FP2 167 aa13.54□□□□□ -0.24
COL27A1-203ENST00000468565 LIPJQ5W064 366 aa13.54□□□□□ -0.24
COL27A1-203ENST00000468565 SNX32Q86XE0 403 aa13.54□□□□□ -0.24
COL27A1-203ENST00000468565 LGI4Q8N135 537 aa13.54□□□□□ -0.24
COL27A1-203ENST00000468565 AMER2Q8N7J2 671 aa13.54□□□□□ -0.24
COL27A1-203ENST00000468565 CATSPER1Q8NEC5 780 aa13.54□□□□□ -0.24
COL27A1-203ENST00000468565 F2RL3Q96RI0 385 aa13.54□□□□□ -0.24
COL27A1-203ENST00000468565 TBCDQ9BTW9 1192 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms