RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-205ENST00000467663 CLEC1AQ8NC01 280 aa11.36□□□□□ -0.59
CTNS-205ENST00000467663 VPS37AQ8NEZ2 397 aa11.36□□□□□ -0.59
CTNS-205ENST00000467663 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.36□□□□□ -0.59
CTNS-205ENST00000467663 SLC7A6OSQ96CW6 309 aaPredicted RBP11.36□□□□□ -0.59
CTNS-205ENST00000467663 MS4A6EQ96DS6 147 aa11.36□□□□□ -0.59
CTNS-205ENST00000467663 SPSB2Q99619 263 aa11.36□□□□□ -0.59
CTNS-205ENST00000467663 HOPXQ9BPY8 73 aaPredicted RBP11.36□□□□□ -0.59
CTNS-205ENST00000467663 RMND5AQ9H871 391 aa11.36□□□□□ -0.59
CTNS-205ENST00000467663 P4HTMQ9NXG6 502 aa11.36□□□□□ -0.59
CTNS-205ENST00000467663 GPR83Q9NYM4 423 aa11.36□□□□□ -0.59
CTNS-205ENST00000467663 C5AR2Q9P296 337 aa11.36□□□□□ -0.59
CTNS-205ENST00000467663 GIMAP2Q9UG22 337 aa11.36□□□□□ -0.59
CTNS-205ENST00000467663 NXT1Q9UKK6 140 aaKnown RBP11.36□□□□□ -0.59
CTNS-205ENST00000467663 SLC22A7Q9Y694 548 aa11.36□□□□□ -0.59
CTNS-205ENST00000467663 C15orf38-AP3S2A0A0A6YYH1 394 aa11.35□□□□□ -0.59
CTNS-205ENST00000467663 VSTM2BA6NLU5 285 aa11.35□□□□□ -0.59
CTNS-205ENST00000467663 H0YGG7 62 aa11.35□□□□□ -0.59
CTNS-205ENST00000467663 PLPP1O14494 284 aa11.35□□□□□ -0.59
CTNS-205ENST00000467663 DPM1O60762 260 aa11.35□□□□□ -0.59
CTNS-205ENST00000467663 EEDO75530 441 aaKnown RBP11.35□□□□□ -0.59
CTNS-205ENST00000467663 SORBS2O94875 1100 aaKnown RBP11.35□□□□□ -0.59
CTNS-205ENST00000467663 MED26O95402 600 aa11.35□□□□□ -0.59
CTNS-205ENST00000467663 EIF2S1P05198 315 aaKnown RBP11.35□□□□□ -0.59
CTNS-205ENST00000467663 ATXN8OSP0DMR3 200 aa11.35□□□□□ -0.59
CTNS-205ENST00000467663 DRD2P14416 443 aa11.35□□□□□ -0.59
CTNS-205ENST00000467663 BSGP35613 385 aa11.35□□□□□ -0.59
CTNS-205ENST00000467663 OR1D4P47884 311 aa11.35□□□□□ -0.59
CTNS-205ENST00000467663 MAPK12P53778 367 aa11.35□□□□□ -0.59
CTNS-205ENST00000467663 MLLT10P55197 1068 aa11.35□□□□□ -0.59
CTNS-205ENST00000467663 ARF3P61204 181 aaPredicted RBP11.35□□□□□ -0.59
CTNS-205ENST00000467663 UFM1P61960 85 aa11.35□□□□□ -0.59
CTNS-205ENST00000467663 MYBPC3Q14896 1274 aa11.35□□□□□ -0.59
CTNS-205ENST00000467663 CCNYL2Q5T2Q4 361 aa11.35□□□□□ -0.59
CTNS-205ENST00000467663 ABHD17CQ6PCB6 329 aa11.35□□□□□ -0.59
CTNS-205ENST00000467663 VN1R4Q7Z5H5 301 aa11.35□□□□□ -0.59
CTNS-205ENST00000467663 ARPINQ7Z6K5 226 aa11.35□□□□□ -0.59
CTNS-205ENST00000467663 RIMKLAQ8IXN7 391 aa11.35□□□□□ -0.59
CTNS-205ENST00000467663 TMEM132CQ8N3T6 1108 aa11.35□□□□□ -0.59
CTNS-205ENST00000467663 DPP10Q8N608 796 aa11.35□□□□□ -0.59
CTNS-205ENST00000467663 C7orf57Q8NEG2 295 aa11.35□□□□□ -0.59
CTNS-205ENST00000467663 OR8J2Q8NGG1 315 aa11.35□□□□□ -0.59
CTNS-205ENST00000467663 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.35□□□□□ -0.59
CTNS-205ENST00000467663 MARK4Q96L34 752 aa11.35□□□□□ -0.59
CTNS-205ENST00000467663 C10orf90Q96M02 699 aa11.35□□□□□ -0.59
CTNS-205ENST00000467663 F2RL3Q96RI0 385 aa11.35□□□□□ -0.59
CTNS-205ENST00000467663 FAIM2Q9BWQ8 316 aa11.35□□□□□ -0.59
CTNS-205ENST00000467663 NPLQ9BXD5 320 aaPredicted RBP11.35□□□□□ -0.59
CTNS-205ENST00000467663 COPS7BQ9H9Q2 264 aaPredicted RBP11.35□□□□□ -0.59
CTNS-205ENST00000467663 ZNF304Q9HCX3 659 aa11.35□□□□□ -0.59
CTNS-205ENST00000467663 FAM120CQ9NX05 1096 aaKnown RBP11.35□□□□□ -0.59
CTNS-205ENST00000467663 LYARQ9NX58 379 aaKnown RBP11.35□□□□□ -0.59
CTNS-205ENST00000467663 MS4A12Q9NXJ0 267 aa11.35□□□□□ -0.59
CTNS-205ENST00000467663 TAS2R1Q9NYW7 299 aa11.35□□□□□ -0.59
CTNS-205ENST00000467663 EHD3Q9NZN3 535 aa11.35□□□□□ -0.59
CTNS-205ENST00000467663 ATP6V1HQ9UI12 483 aa11.35□□□□□ -0.59
CTNS-205ENST00000467663 PRPF19Q9UMS4 504 aaKnown RBP11.35□□□□□ -0.59
CTNS-205ENST00000467663 DLGAP4Q9Y2H0 992 aa11.35□□□□□ -0.59
CTNS-205ENST00000467663 AP3M1Q9Y2T2 418 aa11.35□□□□□ -0.59
CTNS-205ENST00000467663 TTLL8A6PVC2 850 aa11.34□□□□□ -0.59
CTNS-205ENST00000467663 NR5A2O00482 541 aa11.34□□□□□ -0.59
CTNS-205ENST00000467663 SOCS6O14544 535 aa11.34□□□□□ -0.59
CTNS-205ENST00000467663 TBX6O95947 436 aaPredicted RBP11.34□□□□□ -0.59
CTNS-205ENST00000467663 SERPIND1P05546 499 aa11.34□□□□□ -0.59
CTNS-205ENST00000467663 PGRP06401 933 aa11.34□□□□□ -0.59
CTNS-205ENST00000467663 KLK1P06870 262 aa11.34□□□□□ -0.59
CTNS-205ENST00000467663 SMIM10L1P0DMW3 83 aa11.34□□□□□ -0.59
CTNS-205ENST00000467663 HIST1H1TP22492 207 aaPredicted RBP11.34□□□□□ -0.59
CTNS-205ENST00000467663 S100A3P33764 101 aa11.34□□□□□ -0.59
CTNS-205ENST00000467663 SSR2P43308 183 aa11.34□□□□□ -0.59
CTNS-205ENST00000467663 MTTPP55157 894 aa11.34□□□□□ -0.59
CTNS-205ENST00000467663 RAE1P78406 368 aaKnown RBP11.34□□□□□ -0.59
CTNS-205ENST00000467663 ACTN3Q08043 901 aaPredicted RBP11.34□□□□□ -0.59
CTNS-205ENST00000467663 HYAL2Q12891 473 aa11.34□□□□□ -0.59
CTNS-205ENST00000467663 PTGR1Q14914 329 aa11.34□□□□□ -0.59
CTNS-205ENST00000467663 MUM1Q2TAK8 710 aa11.34□□□□□ -0.59
CTNS-205ENST00000467663 TOR1AIP1Q5JTV8 583 aa11.34□□□□□ -0.59
CTNS-205ENST00000467663 ANXA8L1Q5VT79 327 aa11.34□□□□□ -0.59
CTNS-205ENST00000467663 ADNP2Q6IQ32 1131 aa11.34□□□□□ -0.59
CTNS-205ENST00000467663 JMJD6Q6NYC1 403 aaPredicted RBP11.34□□□□□ -0.59
CTNS-205ENST00000467663 IGFL3Q6UXB1 125 aa11.34□□□□□ -0.59
CTNS-205ENST00000467663 GPR180Q86V85 440 aa11.34□□□□□ -0.59
CTNS-205ENST00000467663 PGAM4Q8N0Y7 254 aa11.34□□□□□ -0.59
CTNS-205ENST00000467663 GALNT16Q8N428 558 aa11.34□□□□□ -0.59
CTNS-205ENST00000467663 RNF175Q8N4F7 328 aa11.34□□□□□ -0.59
CTNS-205ENST00000467663 DTWD1Q8N5C7 304 aa11.34□□□□□ -0.59
CTNS-205ENST00000467663 RBMXL3Q8N7X1 1067 aaKnown RBP11.34□□□□□ -0.59
CTNS-205ENST00000467663 C16orf78Q8WTQ4 265 aa11.34□□□□□ -0.59
CTNS-205ENST00000467663 COQ8BQ96D53 544 aa11.34□□□□□ -0.59
CTNS-205ENST00000467663 SMIM10Q96HG1 83 aa11.34□□□□□ -0.59
CTNS-205ENST00000467663 TSSK3Q96PN8 268 aa11.34□□□□□ -0.59
CTNS-205ENST00000467663 SERINC2Q96SA4 455 aa11.34□□□□□ -0.59
CTNS-205ENST00000467663 ZNF717Q9BY31 904 aaPredicted RBP11.34□□□□□ -0.59
CTNS-205ENST00000467663 REEP4Q9H6H4 257 aa11.34□□□□□ -0.59
CTNS-205ENST00000467663 ZNF552Q9H707 407 aaPredicted RBP11.34□□□□□ -0.59
CTNS-205ENST00000467663 SYNPO2LQ9H987 977 aa11.34□□□□□ -0.59
CTNS-205ENST00000467663 ATP13A2Q9NQ11 1180 aa11.34□□□□□ -0.59
CTNS-205ENST00000467663 SLC52A3Q9NQ40 469 aa11.34□□□□□ -0.59
CTNS-205ENST00000467663 PRDM7Q9NQW5 492 aa11.34□□□□□ -0.59
CTNS-205ENST00000467663 SEMA3GQ9NS98 782 aa11.34□□□□□ -0.59
CTNS-205ENST00000467663 CTSFQ9UBX1 484 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms