RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 PLBD1Q6P4A8 553 aa1.85□□□□□ -2.11
GTF3C3-209ENST00000466862 C11orf57Q6ZUT1 292 aaPredicted RBP1.85□□□□□ -2.11
GTF3C3-209ENST00000466862 SPATA21Q7Z572 469 aa1.85□□□□□ -2.11
GTF3C3-209ENST00000466862 SPATA19Q7Z5L4 167 aa1.85□□□□□ -2.11
GTF3C3-209ENST00000466862 FBXO16Q8IX29 292 aaPredicted RBP1.85□□□□□ -2.11
GTF3C3-209ENST00000466862 KLHL7Q8IXQ5 586 aa1.85□□□□□ -2.11
GTF3C3-209ENST00000466862 SYCP3Q8IZU3 236 aa1.85□□□□□ -2.11
GTF3C3-209ENST00000466862 TMEM99Q8N816 258 aa1.85□□□□□ -2.11
GTF3C3-209ENST00000466862 NAT8LQ8N9F0 302 aa1.85□□□□□ -2.11
GTF3C3-209ENST00000466862 ATAD1Q8NBU5 361 aa1.85□□□□□ -2.11
GTF3C3-209ENST00000466862 FIBINQ8TAL6 211 aa1.85□□□□□ -2.11
GTF3C3-209ENST00000466862 CORO2AQ92828 525 aa1.85□□□□□ -2.11
GTF3C3-209ENST00000466862 PTP4A1Q93096 173 aa1.85□□□□□ -2.11
GTF3C3-209ENST00000466862 FAM104AQ969W3 186 aa1.85□□□□□ -2.11
GTF3C3-209ENST00000466862 CCDC47Q96A33 483 aaKnown RBP1.85□□□□□ -2.11
GTF3C3-209ENST00000466862 EXOC4Q96A65 974 aa1.85□□□□□ -2.11
GTF3C3-209ENST00000466862 BPIFA2Q96DR5 249 aa1.85□□□□□ -2.11
GTF3C3-209ENST00000466862 CCDC43Q96MW1 224 aaKnown RBP1.85□□□□□ -2.11
GTF3C3-209ENST00000466862 PRMT1Q99873 361 aaKnown RBP1.85□□□□□ -2.11
GTF3C3-209ENST00000466862 MLPHQ9BV36 600 aaPredicted RBP1.85□□□□□ -2.11
GTF3C3-209ENST00000466862 ACAT2Q9BWD1 397 aa1.85□□□□□ -2.11
GTF3C3-209ENST00000466862 TRIM7Q9C029 511 aa1.85□□□□□ -2.11
GTF3C3-209ENST00000466862 ABCB8Q9NUT2 735 aa1.85□□□□□ -2.11
GTF3C3-209ENST00000466862 ARMCX3Q9UH62 379 aaPredicted RBP1.85□□□□□ -2.11
GTF3C3-209ENST00000466862 ISY1Q9ULR0 285 aaKnown RBP1.85□□□□□ -2.11
GTF3C3-209ENST00000466862 LIPT1Q9Y234 373 aa1.85□□□□□ -2.11
GTF3C3-209ENST00000466862 NCKAP1Q9Y2A7 1128 aa1.85□□□□□ -2.11
GTF3C3-209ENST00000466862 SH3GLB1Q9Y371 365 aa1.85□□□□□ -2.11
GTF3C3-209ENST00000466862 KNSTRNQ9Y448 316 aa1.85□□□□□ -2.11
GTF3C3-209ENST00000466862 NACAE9PAV3 2078 aa1.85□□□□□ -2.11
GTF3C3-209ENST00000466862 CFAP65Q6ZU64 1925 aaKnown RBP1.85□□□□□ -2.11
GTF3C3-209ENST00000466862 ZFP92A6NM28 416 aa1.84□□□□□ -2.11
GTF3C3-209ENST00000466862 CCT8L1PA6NM43 557 aa1.84□□□□□ -2.11
GTF3C3-209ENST00000466862 B4GAT1O43505 415 aa1.84□□□□□ -2.11
GTF3C3-209ENST00000466862 HTATSF1O43719 755 aaKnown RBP1.84□□□□□ -2.11
GTF3C3-209ENST00000466862 ACSL4O60488 711 aa1.84□□□□□ -2.11
GTF3C3-209ENST00000466862 PDGFBP01127 241 aaPredicted RBP1.84□□□□□ -2.11
GTF3C3-209ENST00000466862 MT-ND3P03897 115 aa1.84□□□□□ -2.11
GTF3C3-209ENST00000466862 GBAP04062 536 aa1.84□□□□□ -2.11
GTF3C3-209ENST00000466862 ZFYP08048 801 aaPredicted RBP1.84□□□□□ -2.11
GTF3C3-209ENST00000466862 FAM58BPP0C7Q3 252 aa1.84□□□□□ -2.11
GTF3C3-209ENST00000466862 SP9P0CG40 484 aa1.84□□□□□ -2.11
GTF3C3-209ENST00000466862 LBPP18428 481 aa1.84□□□□□ -2.11
GTF3C3-209ENST00000466862 MDKP21741 143 aaPredicted RBP1.84□□□□□ -2.11
GTF3C3-209ENST00000466862 CALRP27797 417 aaKnown RBP1.84□□□□□ -2.11
GTF3C3-209ENST00000466862 HMGCLP35914 325 aa1.84□□□□□ -2.11
GTF3C3-209ENST00000466862 FHITP49789 147 aa1.84□□□□□ -2.11
GTF3C3-209ENST00000466862 ZNF133P52736 654 aaPredicted RBP1.84□□□□□ -2.11
GTF3C3-209ENST00000466862 SLC25A1P53007 311 aa1.84□□□□□ -2.11
GTF3C3-209ENST00000466862 PTENP60484 403 aa1.84□□□□□ -2.11
GTF3C3-209ENST00000466862 CRMP1Q14194 572 aa1.84□□□□□ -2.11
GTF3C3-209ENST00000466862 RCN2Q14257 317 aa1.84□□□□□ -2.11
GTF3C3-209ENST00000466862 C2orf76Q3KRA6 126 aa1.84□□□□□ -2.11
GTF3C3-209ENST00000466862 ANKRD20A4Q4UJ75 823 aa1.84□□□□□ -2.11
GTF3C3-209ENST00000466862 ANKRD20A8PQ5CZ79 823 aa1.84□□□□□ -2.11
GTF3C3-209ENST00000466862 GLRA4Q5JXX5 417 aa1.84□□□□□ -2.11
GTF3C3-209ENST00000466862 ANKRD20A2Q5SQ80 823 aa1.84□□□□□ -2.11
GTF3C3-209ENST00000466862 ANKRD20A1Q5TYW2 823 aa1.84□□□□□ -2.11
GTF3C3-209ENST00000466862 ANKRD20A3Q5VUR7 823 aa1.84□□□□□ -2.11
GTF3C3-209ENST00000466862 FAM91A1Q658Y4 838 aa1.84□□□□□ -2.11
GTF3C3-209ENST00000466862 ALKBH5Q6P6C2 394 aaKnown RBP1.84□□□□□ -2.11
GTF3C3-209ENST00000466862 GCNT7Q6ZNI0 430 aa1.84□□□□□ -2.11
GTF3C3-209ENST00000466862 HOOK3Q86VS8 718 aa1.84□□□□□ -2.11
GTF3C3-209ENST00000466862 CACUL1Q86Y37 369 aa1.84□□□□□ -2.11
GTF3C3-209ENST00000466862 TUSC5Q8IXB3 177 aa1.84□□□□□ -2.11
GTF3C3-209ENST00000466862 TIGD4Q8IY51 512 aa1.84□□□□□ -2.11
GTF3C3-209ENST00000466862 OR8H1Q8NGG4 311 aa1.84□□□□□ -2.11
GTF3C3-209ENST00000466862 OR13C5Q8NGS8 318 aa1.84□□□□□ -2.11
GTF3C3-209ENST00000466862 GPR148Q8TDV2 347 aa1.84□□□□□ -2.11
GTF3C3-209ENST00000466862 KRT35Q92764 455 aa1.84□□□□□ -2.11
GTF3C3-209ENST00000466862 FAF2Q96CS3 445 aa1.84□□□□□ -2.11
GTF3C3-209ENST00000466862 VSIG2Q96IQ7 327 aa1.84□□□□□ -2.11
GTF3C3-209ENST00000466862 CABS1Q96KC9 395 aa1.84□□□□□ -2.11
GTF3C3-209ENST00000466862 CCT8L2Q96SF2 557 aa1.84□□□□□ -2.11
GTF3C3-209ENST00000466862 TTYH2Q9BSA4 534 aa1.84□□□□□ -2.11
GTF3C3-209ENST00000466862 INPP5KQ9BT40 448 aa1.84□□□□□ -2.11
GTF3C3-209ENST00000466862 NT5DC2Q9H857 520 aa1.84□□□□□ -2.11
GTF3C3-209ENST00000466862 S100A14Q9HCY8 104 aa1.84□□□□□ -2.11
GTF3C3-209ENST00000466862 RPS6KB2Q9UBS0 482 aa1.84□□□□□ -2.11
GTF3C3-209ENST00000466862 MLXQ9UH92 298 aa1.84□□□□□ -2.11
GTF3C3-209ENST00000466862 RNF24Q9Y225 148 aa1.84□□□□□ -2.11
GTF3C3-209ENST00000466862 PCDHGA1Q9Y5H4 931 aa1.84□□□□□ -2.11
GTF3C3-209ENST00000466862 ZNFX1Q9P2E3 1918 aaKnown RBP1.83□□□□□ -2.12
GTF3C3-209ENST00000466862 ABCC9O60706 1549 aa1.83□□□□□ -2.12
GTF3C3-209ENST00000466862 GTPBP10A4D1E9 387 aaKnown RBP1.83□□□□□ -2.12
GTF3C3-209ENST00000466862 LRRD1A4D1F6 860 aa1.83□□□□□ -2.12
GTF3C3-209ENST00000466862 OOEPA6NGQ2 149 aa1.83□□□□□ -2.12
GTF3C3-209ENST00000466862 B4DXG7 233 aa1.83□□□□□ -2.12
GTF3C3-209ENST00000466862 FAM86B1E9PN63 330 aa1.83□□□□□ -2.12
GTF3C3-209ENST00000466862 IFIT3O14879 490 aaKnown RBP1.83□□□□□ -2.12
GTF3C3-209ENST00000466862 ZNF263O14978 683 aa1.83□□□□□ -2.12
GTF3C3-209ENST00000466862 CSDE1O75534 798 aaKnown RBP1.83□□□□□ -2.12
GTF3C3-209ENST00000466862 VIMP08670 466 aaKnown RBP1.83□□□□□ -2.12
GTF3C3-209ENST00000466862 FAM86B2P0C5J1 330 aa1.83□□□□□ -2.12
GTF3C3-209ENST00000466862 ODC1P11926 461 aa1.83□□□□□ -2.12
GTF3C3-209ENST00000466862 ZNF17P17021 662 aa1.83□□□□□ -2.12
GTF3C3-209ENST00000466862 ADRA2CP18825 462 aa1.83□□□□□ -2.12
GTF3C3-209ENST00000466862 HLA-DPA1P20036 260 aa1.83□□□□□ -2.12
GTF3C3-209ENST00000466862 ACKR3P25106 362 aa1.83□□□□□ -2.12
GTF3C3-209ENST00000466862 CRKLP46109 303 aaKnown RBP1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms