RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 PLIN5Q00G26 463 aa18.96■□□□□ 0.63
SKA3-205ENST00000465471 NFATC3Q12968 1075 aa18.96■□□□□ 0.63
SKA3-205ENST00000465471 NR6A1Q15406 480 aa18.96■□□□□ 0.63
SKA3-205ENST00000465471 NOXRED1Q6NXP6 359 aa18.96■□□□□ 0.63
SKA3-205ENST00000465471 DDIASQ8IXT1 998 aa18.96■□□□□ 0.63
SKA3-205ENST00000465471 KIRREL3Q8IZU9 778 aa18.96■□□□□ 0.63
SKA3-205ENST00000465471 ARMC10Q8N2F6 343 aa18.96■□□□□ 0.63
SKA3-205ENST00000465471 KIF2BQ8N4N8 673 aa18.96■□□□□ 0.63
SKA3-205ENST00000465471 RBMXL3Q8N7X1 1067 aaKnown RBP18.96■□□□□ 0.63
SKA3-205ENST00000465471 GOLGA6L1Q8N7Z2 621 aa18.96■□□□□ 0.63
SKA3-205ENST00000465471 MORN4Q8NDC4 146 aa18.96■□□□□ 0.63
SKA3-205ENST00000465471 DAZLQ92904 295 aaKnown RBP18.96■□□□□ 0.63
SKA3-205ENST00000465471 C3orf30Q96M34 536 aa18.96■□□□□ 0.63
SKA3-205ENST00000465471 NPAS2Q99743 824 aa18.96■□□□□ 0.63
SKA3-205ENST00000465471 PELOQ9BRX2 385 aaKnown RBP18.96■□□□□ 0.63
SKA3-205ENST00000465471 FAIM2Q9BWQ8 316 aa18.96■□□□□ 0.63
SKA3-205ENST00000465471 ILKAPQ9H0C8 392 aaPredicted RBP18.96■□□□□ 0.63
SKA3-205ENST00000465471 PTGFRNQ9P2B2 879 aa18.96■□□□□ 0.63
SKA3-205ENST00000465471 DLGAP4Q9Y2H0 992 aa18.96■□□□□ 0.63
SKA3-205ENST00000465471 POLR3HQ9Y535 204 aaPredicted RBP18.96■□□□□ 0.63
SKA3-205ENST00000465471 A0A1W2PS29 197 aa18.95■□□□□ 0.62
SKA3-205ENST00000465471 C17orf105B2RV13 164 aa18.95■□□□□ 0.62
SKA3-205ENST00000465471 KLF11O14901 512 aa18.95■□□□□ 0.62
SKA3-205ENST00000465471 DPM1O60762 260 aa18.95■□□□□ 0.62
SKA3-205ENST00000465471 SEC22BO75396 215 aa18.95■□□□□ 0.62
SKA3-205ENST00000465471 JUNP05412 331 aaKnown RBP18.95■□□□□ 0.62
SKA3-205ENST00000465471 SLC35E2P0CK97 266 aa18.95■□□□□ 0.62
SKA3-205ENST00000465471 DRD2P14416 443 aa18.95■□□□□ 0.62
SKA3-205ENST00000465471 SPRED3Q2MJR0 410 aa18.95■□□□□ 0.62
SKA3-205ENST00000465471 B3GNTL1Q67FW5 361 aaPredicted RBP18.95■□□□□ 0.62
SKA3-205ENST00000465471 DGAT2L6Q6ZPD8 337 aa18.95■□□□□ 0.62
SKA3-205ENST00000465471 LGI4Q8N135 537 aa18.95■□□□□ 0.62
SKA3-205ENST00000465471 OR4K14Q8NGD5 310 aa18.95■□□□□ 0.62
SKA3-205ENST00000465471 NCLNQ969V3 563 aa18.95■□□□□ 0.62
SKA3-205ENST00000465471 VMP1Q96GC9 406 aa18.95■□□□□ 0.62
SKA3-205ENST00000465471 DGAT2Q96PD7 388 aa18.95■□□□□ 0.62
SKA3-205ENST00000465471 KCNK13Q9HB14 408 aa18.95■□□□□ 0.62
SKA3-205ENST00000465471 MYNNQ9NPC7 610 aa18.95■□□□□ 0.62
SKA3-205ENST00000465471 WBP11Q9Y2W2 641 aaKnown RBP18.95■□□□□ 0.62
SKA3-205ENST00000465471 TMED5Q9Y3A6 229 aa18.95■□□□□ 0.62
SKA3-205ENST00000465471 CLCA3PQ9Y6N3 262 aa18.95■□□□□ 0.62
SKA3-205ENST00000465471 SKAP2O75563 359 aaPredicted RBP18.94■□□□□ 0.62
SKA3-205ENST00000465471 IGKV3-11P04433 115 aa18.94■□□□□ 0.62
SKA3-205ENST00000465471 COX7A2P14406 83 aa18.94■□□□□ 0.62
SKA3-205ENST00000465471 PIK3R1P27986 724 aa18.94■□□□□ 0.62
SKA3-205ENST00000465471 RPL14P50914 215 aaKnown RBP18.94■□□□□ 0.62
SKA3-205ENST00000465471 KLRB1Q12918 225 aa18.94■□□□□ 0.62
SKA3-205ENST00000465471 RFTN2Q52LD8 501 aaPredicted RBP18.94■□□□□ 0.62
SKA3-205ENST00000465471 FAM71E1Q6IPT2 247 aa18.94■□□□□ 0.62
SKA3-205ENST00000465471 TRIM42Q8IWZ5 723 aa18.94■□□□□ 0.62
SKA3-205ENST00000465471 SLC2A12Q8TD20 617 aa18.94■□□□□ 0.62
SKA3-205ENST00000465471 TM9SF4Q92544 642 aa18.94■□□□□ 0.62
SKA3-205ENST00000465471 ZNF681Q96N22 645 aa18.94■□□□□ 0.62
SKA3-205ENST00000465471 RNF32Q9H0A6 362 aa18.94■□□□□ 0.62
SKA3-205ENST00000465471 THAP1Q9NVV9 213 aa18.94■□□□□ 0.62
SKA3-205ENST00000465471 EHD3Q9NZN3 535 aa18.94■□□□□ 0.62
SKA3-205ENST00000465471 CNTRLQ7Z7A1 2325 aa18.93■□□□□ 0.62
SKA3-205ENST00000465471 EIF4E1BA6NMX2 242 aaKnown RBP18.93■□□□□ 0.62
SKA3-205ENST00000465471 CPMP14384 443 aa18.93■□□□□ 0.62
SKA3-205ENST00000465471 TACR1P25103 407 aa18.93■□□□□ 0.62
SKA3-205ENST00000465471 CLCN2P51788 898 aa18.93■□□□□ 0.62
SKA3-205ENST00000465471 RPL38P63173 70 aaKnown RBP18.93■□□□□ 0.62
SKA3-205ENST00000465471 OCRLQ01968 901 aa18.93■□□□□ 0.62
SKA3-205ENST00000465471 HEPACAMQ14CZ8 416 aa18.93■□□□□ 0.62
SKA3-205ENST00000465471 ATG16L1Q676U5 607 aa18.93■□□□□ 0.62
SKA3-205ENST00000465471 LINC00696Q6ZRV3 163 aa18.93■□□□□ 0.62
SKA3-205ENST00000465471 IKBIPQ70UQ0 350 aa18.93■□□□□ 0.62
SKA3-205ENST00000465471 PTRH1Q86Y79 214 aaKnown RBP18.93■□□□□ 0.62
SKA3-205ENST00000465471 CRLF3Q8IUI8 442 aa18.93■□□□□ 0.62
SKA3-205ENST00000465471 SLC5A8Q8N695 610 aa18.93■□□□□ 0.62
SKA3-205ENST00000465471 OR1N1Q8NGS0 311 aa18.93■□□□□ 0.62
SKA3-205ENST00000465471 ZNF721Q8TF20 911 aa18.93■□□□□ 0.62
SKA3-205ENST00000465471 PPWD1Q96BP3 646 aaKnown RBP18.93■□□□□ 0.62
SKA3-205ENST00000465471 C19orf60Q96EN9 201 aa18.93■□□□□ 0.62
SKA3-205ENST00000465471 RBM18Q96H35 190 aaKnown RBP18.93■□□□□ 0.62
SKA3-205ENST00000465471 FBXL20Q96IG2 436 aa18.93■□□□□ 0.62
SKA3-205ENST00000465471 PPP3R2Q96LZ3 170 aa18.93■□□□□ 0.62
SKA3-205ENST00000465471 EPS8L2Q9H6S3 715 aa18.93■□□□□ 0.62
SKA3-205ENST00000465471 MANSC1Q9H8J5 431 aa18.93■□□□□ 0.62
SKA3-205ENST00000465471 EXO1Q9UQ84 846 aaKnown RBP18.93■□□□□ 0.62
SKA3-205ENST00000465471 TRBV11-1A0A0K0K1C0 115 aa18.92■□□□□ 0.62
SKA3-205ENST00000465471 B8ZZF3 427 aa18.92■□□□□ 0.62
SKA3-205ENST00000465471 MAN1A2O60476 641 aa18.92■□□□□ 0.62
SKA3-205ENST00000465471 SDC1P18827 310 aa18.92■□□□□ 0.62
SKA3-205ENST00000465471 DDCP20711 480 aa18.92■□□□□ 0.62
SKA3-205ENST00000465471 XKP51811 444 aa18.92■□□□□ 0.62
SKA3-205ENST00000465471 HK2P52789 917 aa18.92■□□□□ 0.62
SKA3-205ENST00000465471 PPP2R2AP63151 447 aa18.92■□□□□ 0.62
SKA3-205ENST00000465471 CEBPEQ15744 281 aa18.92■□□□□ 0.62
SKA3-205ENST00000465471 ZNF750Q32MQ0 723 aa18.92■□□□□ 0.62
SKA3-205ENST00000465471 ACER2Q5QJU3 275 aa18.92■□□□□ 0.62
SKA3-205ENST00000465471 Q6ZS92 163 aa18.92■□□□□ 0.62
SKA3-205ENST00000465471 ZADH2Q8N4Q0 377 aa18.92■□□□□ 0.62
SKA3-205ENST00000465471 ZNF321PQ8N8H1 164 aa18.92■□□□□ 0.62
SKA3-205ENST00000465471 KLHL29Q96CT2 875 aa18.92■□□□□ 0.62
SKA3-205ENST00000465471 CNRIP1Q96F85 164 aaPredicted RBP18.92■□□□□ 0.62
SKA3-205ENST00000465471 ZNF354BQ96LW1 612 aa18.92■□□□□ 0.62
SKA3-205ENST00000465471 ACBD3Q9H3P7 528 aa18.92■□□□□ 0.62
SKA3-205ENST00000465471 CXorf21Q9HAI6 301 aa18.92■□□□□ 0.62
SKA3-205ENST00000465471 GIMAP2Q9UG22 337 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms