RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 OR6K2Q8NGY2 324 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 AKAP1Q92667 903 aaKnown RBP eCLIP6.94□□□□□ -1.3
USP48-206ENST00000464577 UFD1Q92890 307 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 CREB3L1Q96BA8 519 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 UPRTQ96BW1 309 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 PPCDCQ96CD2 204 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 MAP6Q96JE9 813 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 GPR137Q96N19 417 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 COQ7Q99807 217 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 ARPC5LQ9BPX5 153 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 FUZQ9BT04 418 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 C2orf49Q9BVC5 232 aaPredicted RBP6.94□□□□□ -1.3
USP48-206ENST00000464577 GPR62Q9BZJ7 368 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.94□□□□□ -1.3
USP48-206ENST00000464577 NT5DC2Q9H857 520 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 C12orf10Q9HB07 376 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 FGF20Q9NP95 211 aaPredicted RBP6.94□□□□□ -1.3
USP48-206ENST00000464577 A4GALTQ9NPC4 353 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 GKN1Q9NS71 199 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 ZSCAN32Q9NX65 697 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 RHCGQ9UBD6 479 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 TEKT2Q9UIF3 430 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 ACSL6Q9UKU0 697 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 PPIL1Q9Y3C6 166 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 HSPB11Q9Y547 144 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 SPIN1Q9Y657 262 aaPredicted RBP6.94□□□□□ -1.3
USP48-206ENST00000464577 TRDV1A0A1B0GX56 115 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 OR5K3A6NET4 321 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 WASHC1A8K0Z3 465 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 ARHGEF33A8MVX0 844 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 FAM227AF5H4B4 570 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 PSIP1O75475 530 aaKnown RBP6.94□□□□□ -1.3
USP48-206ENST00000464577 SLCO2B1O94956 709 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 TP53P04637 393 aaPredicted RBP6.94□□□□□ -1.3
USP48-206ENST00000464577 H1F0P07305 194 aaKnown RBP6.94□□□□□ -1.3
USP48-206ENST00000464577 NR2F6P10588 404 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 IRF1P10914 325 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 UBL4AP11441 157 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 ATP1B2P14415 290 aaPredicted RBP6.94□□□□□ -1.3
USP48-206ENST00000464577 SSTR4P31391 388 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 FEN1P39748 380 aaKnown RBP6.94□□□□□ -1.3
USP48-206ENST00000464577 ETV5P41161 510 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 ETV1P50549 477 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 GAS1P54826 345 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 DSTNP60981 165 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 RPS25P62851 125 aaKnown RBP6.94□□□□□ -1.3
USP48-206ENST00000464577 DSG2Q14126 1118 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 SEC23BQ15437 767 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 NDUFA9Q16795 377 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 SLC5A12Q1EHB4 618 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 CDONQ4KMG0 1287 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 FLYWCH1Q4VC44 716 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 SYT14P1Q58G82 188 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 TOR2AQ5JU69 321 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 ZBTB37Q5TC79 503 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 BICRALQ6AI39 1079 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 FAM71E1Q6IPT2 247 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 AGTRAPQ6RW13 159 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 USP45Q70EL2 814 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 TRILQ7L0X0 811 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 RTN4RL1Q86UN2 441 aaPredicted RBP6.94□□□□□ -1.3
USP48-206ENST00000464577 PDZD3Q86UT5 571 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 SIX5Q8N196 739 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 ZNF557Q8N988 423 aaPredicted RBP6.94□□□□□ -1.3
USP48-206ENST00000464577 GPR156Q8NFN8 814 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 OR56A3Q8NH54 315 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 OR52P1PQ8NH57 321 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 LINC01599Q8WXQ3 324 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 FGF11Q92914 225 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 WBP2Q969T9 261 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 SCRN2Q96FV2 425 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 PDXPQ96GD0 296 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 QRFPRQ96P65 431 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 DCLRE1CQ96SD1 692 aaKnown RBP6.94□□□□□ -1.3
USP48-206ENST00000464577 PTPN18Q99952 460 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 POLR2J3Q9H1A7 115 aaKnown RBP6.94□□□□□ -1.3
USP48-206ENST00000464577 BRD9Q9H8M2 597 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 FOLH1BQ9HBA9 442 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 B3GAT2Q9NPZ5 323 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 MCUBQ9NWR8 336 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 PTTG3PQ9NZH4 202 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 TRPM5Q9NZQ8 1165 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 STOX2Q9P2F5 926 aaPredicted RBP6.94□□□□□ -1.3
USP48-206ENST00000464577 ADAM30Q9UKF2 790 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 ACAD8Q9UKU7 415 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 ELF5Q9UKW6 265 aaPredicted RBP6.94□□□□□ -1.3
USP48-206ENST00000464577 EXOSC1Q9Y3B2 195 aaKnown RBP6.94□□□□□ -1.3
USP48-206ENST00000464577 MAP4K5Q9Y4K4 846 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 KIAA1671Q9BY89 1806 aa6.93□□□□□ -1.3
USP48-206ENST00000464577 PIKFYVEQ9Y2I7 2098 aa6.93□□□□□ -1.3
USP48-206ENST00000464577 PIPSLA2A3N6 862 aa6.93□□□□□ -1.3
USP48-206ENST00000464577 INMT-MINDY4F8WBC2 141 aa6.93□□□□□ -1.3
USP48-206ENST00000464577 H3BN98 237 aa6.93□□□□□ -1.3
USP48-206ENST00000464577 FOXE1O00358 373 aaPredicted RBP6.93□□□□□ -1.3
USP48-206ENST00000464577 QSOX1O00391 747 aa6.93□□□□□ -1.3
USP48-206ENST00000464577 OR10H3O60404 316 aa6.93□□□□□ -1.3
USP48-206ENST00000464577 SLC19A2O60779 497 aa6.93□□□□□ -1.3
USP48-206ENST00000464577 RFPL3O75679 317 aa6.93□□□□□ -1.3
USP48-206ENST00000464577 SOX14O95416 240 aa6.93□□□□□ -1.3
USP48-206ENST00000464577 POLR2CP19387 275 aaPredicted RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms