RNA–Protein interactions for RNA: ENST00000464168.5

USP4-208, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-208ENST00000464168 KHDRBS2Q5VWX1 349 aaKnown RBP20.82■□□□□ 0.92
USP4-208ENST00000464168 OR4C11Q6IEV9 310 aa20.82■□□□□ 0.92
USP4-208ENST00000464168 MED27Q6P2C8 311 aa20.82■□□□□ 0.92
USP4-208ENST00000464168 SEM1Q6ZVN7 128 aa20.82■□□□□ 0.92
USP4-208ENST00000464168 LRRC70Q7Z2Q7 622 aa20.82■□□□□ 0.92
USP4-208ENST00000464168 TGIF2LYQ8IUE0 185 aa20.82■□□□□ 0.92
USP4-208ENST00000464168 ULK2Q8IYT8 1036 aa20.82■□□□□ 0.92
USP4-208ENST00000464168 DOK4Q8TEW6 326 aa20.82■□□□□ 0.92
USP4-208ENST00000464168 EXT2Q93063 718 aa20.82■□□□□ 0.92
USP4-208ENST00000464168 CMTM7Q96FZ5 175 aa20.82■□□□□ 0.92
USP4-208ENST00000464168 FBXL20Q96IG2 436 aa20.82■□□□□ 0.92
USP4-208ENST00000464168 OR51B5Q9H339 312 aa20.82■□□□□ 0.92
USP4-208ENST00000464168 ACKR4Q9NPB9 350 aa20.82■□□□□ 0.92
USP4-208ENST00000464168 B4GALT7Q9UBV7 327 aa20.82■□□□□ 0.92
USP4-208ENST00000464168 BOKQ9UMX3 212 aaPredicted RBP20.82■□□□□ 0.92
USP4-208ENST00000464168 SNX24Q9Y343 169 aa20.82■□□□□ 0.92
USP4-208ENST00000464168 PCDHGB3Q9Y5G1 929 aa20.82■□□□□ 0.92
USP4-208ENST00000464168 CHCHD2Q9Y6H1 151 aaPredicted RBP20.82■□□□□ 0.92
USP4-208ENST00000464168 SYT5O00445 386 aa20.81■□□□□ 0.92
USP4-208ENST00000464168 S100BP04271 92 aaPredicted RBP20.81■□□□□ 0.92
USP4-208ENST00000464168 KIR2DL3P43628 341 aa20.81■□□□□ 0.92
USP4-208ENST00000464168 TBL3Q12788 808 aaKnown RBP20.81■□□□□ 0.92
USP4-208ENST00000464168 BIKQ13323 160 aa20.81■□□□□ 0.92
USP4-208ENST00000464168 C18orf63Q68DL7 685 aa20.81■□□□□ 0.92
USP4-208ENST00000464168 FBXW8Q8N3Y1 598 aa20.81■□□□□ 0.92
USP4-208ENST00000464168 RNF175Q8N4F7 328 aa20.81■□□□□ 0.92
USP4-208ENST00000464168 OR10G3Q8NGC4 313 aa20.81■□□□□ 0.92
USP4-208ENST00000464168 NEIL3Q8TAT5 605 aa20.81■□□□□ 0.92
USP4-208ENST00000464168 PYROXD1Q8WU10 500 aa20.81■□□□□ 0.92
USP4-208ENST00000464168 TANKQ92844 425 aa20.81■□□□□ 0.92
USP4-208ENST00000464168 RBBP8Q99708 897 aa20.81■□□□□ 0.92
USP4-208ENST00000464168 CPNE1Q99829 537 aa20.81■□□□□ 0.92
USP4-208ENST00000464168 GPATCH1Q9BRR8 931 aaKnown RBP20.81■□□□□ 0.92
USP4-208ENST00000464168 SLC6A15Q9H2J7 730 aa20.81■□□□□ 0.92
USP4-208ENST00000464168 PRM3Q9NNZ6 103 aa20.81■□□□□ 0.92
USP4-208ENST00000464168 RASSF1Q9NS23 344 aa20.81■□□□□ 0.92
USP4-208ENST00000464168 MS4A12Q9NXJ0 267 aa20.81■□□□□ 0.92
USP4-208ENST00000464168 CNIH4Q9P003 139 aa20.81■□□□□ 0.92
USP4-208ENST00000464168 ST6GALNAC2Q9UJ37 374 aa20.81■□□□□ 0.92
USP4-208ENST00000464168 DYRK3O43781 588 aa20.8■□□□□ 0.92
USP4-208ENST00000464168 FBXO45P0C2W1 286 aa20.8■□□□□ 0.92
USP4-208ENST00000464168 SERPINB1P30740 379 aa20.8■□□□□ 0.92
USP4-208ENST00000464168 RAB10P61026 200 aa20.8■□□□□ 0.92
USP4-208ENST00000464168 PLIN5Q00G26 463 aa20.8■□□□□ 0.92
USP4-208ENST00000464168 ISCA2Q86U28 154 aa20.8■□□□□ 0.92
USP4-208ENST00000464168 GPR180Q86V85 440 aa20.8■□□□□ 0.92
USP4-208ENST00000464168 FAM13CQ8NE31 585 aa20.8■□□□□ 0.92
USP4-208ENST00000464168 CHDHQ8NE62 594 aaPredicted RBP20.8■□□□□ 0.92
USP4-208ENST00000464168 CDKL2Q92772 493 aa20.8■□□□□ 0.92
USP4-208ENST00000464168 ART5Q96L15 291 aa20.8■□□□□ 0.92
USP4-208ENST00000464168 CLEC4MQ9H2X3 399 aaPredicted RBP20.8■□□□□ 0.92
USP4-208ENST00000464168 ALG9Q9H6U8 611 aa20.8■□□□□ 0.92
USP4-208ENST00000464168 QPCTLQ9NXS2 382 aa20.8■□□□□ 0.92
USP4-208ENST00000464168 CRIM1Q9NZV1 1036 aa20.8■□□□□ 0.92
USP4-208ENST00000464168 TXNDC16Q9P2K2 825 aa20.8■□□□□ 0.92
USP4-208ENST00000464168 CNOT11Q9UKZ1 510 aaKnown RBP20.8■□□□□ 0.92
USP4-208ENST00000464168 WASHC1A8K0Z3 465 aa20.79■□□□□ 0.92
USP4-208ENST00000464168 HSPB2A8KAH6 182 aa20.79■□□□□ 0.92
USP4-208ENST00000464168 PRKRAO75569 313 aaKnown RBP20.79■□□□□ 0.92
USP4-208ENST00000464168 ALOX15P16050 662 aaPredicted RBP20.79■□□□□ 0.92
USP4-208ENST00000464168 SERPINB3P29508 390 aa20.79■□□□□ 0.92
USP4-208ENST00000464168 GP5P40197 560 aa20.79■□□□□ 0.92
USP4-208ENST00000464168 HNRNPH2P55795 449 aaKnown RBP20.79■□□□□ 0.92
USP4-208ENST00000464168 DLG1Q12959 904 aa20.79■□□□□ 0.92
USP4-208ENST00000464168 HSPB2Q16082 182 aa20.79■□□□□ 0.92
USP4-208ENST00000464168 CYS1Q717R9 158 aa20.79■□□□□ 0.92
USP4-208ENST00000464168 DND1Q8IYX4 353 aaKnown RBP20.79■□□□□ 0.92
USP4-208ENST00000464168 ST13P4Q8IZP2 240 aaPredicted RBP20.79■□□□□ 0.92
USP4-208ENST00000464168 RELL2Q8NC24 303 aaPredicted RBP20.79■□□□□ 0.92
USP4-208ENST00000464168 STAG3L4Q8TBR4 150 aa20.79■□□□□ 0.92
USP4-208ENST00000464168 RGMAQ96B86 450 aa20.79■□□□□ 0.92
USP4-208ENST00000464168 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.79■□□□□ 0.92
USP4-208ENST00000464168 NINQ8N4C6 2090 aa20.79■□□□□ 0.92
USP4-208ENST00000464168 IQANK1A0A1B0GTG1 560 aa20.78■□□□□ 0.92
USP4-208ENST00000464168 TCRBV9S1A1TA0A576 114 aa20.78■□□□□ 0.92
USP4-208ENST00000464168 FAM159BA6NKW6 160 aa20.78■□□□□ 0.92
USP4-208ENST00000464168 CCDC188H7C350 402 aa20.78■□□□□ 0.92
USP4-208ENST00000464168 K7EPI3 171 aa20.78■□□□□ 0.92
USP4-208ENST00000464168 PLPP1O14494 284 aa20.78■□□□□ 0.92
USP4-208ENST00000464168 LRATO95237 230 aa20.78■□□□□ 0.92
USP4-208ENST00000464168 C1QAP02745 245 aa20.78■□□□□ 0.92
USP4-208ENST00000464168 KLK2P20151 261 aa20.78■□□□□ 0.92
USP4-208ENST00000464168 TLX1P31314 330 aaPredicted RBP20.78■□□□□ 0.92
USP4-208ENST00000464168 UQCRC1P31930 480 aa20.78■□□□□ 0.92
USP4-208ENST00000464168 TRPC1P48995 793 aa20.78■□□□□ 0.92
USP4-208ENST00000464168 HERVK_113P63132 956 aa20.78■□□□□ 0.92
USP4-208ENST00000464168 ERVK-8P63133 956 aa20.78■□□□□ 0.92
USP4-208ENST00000464168 TNFRSF17Q02223 184 aa20.78■□□□□ 0.92
USP4-208ENST00000464168 ZNF267Q14586 743 aaPredicted RBP20.78■□□□□ 0.92
USP4-208ENST00000464168 ZCCHC7Q8N3Z6 543 aaKnown RBP20.78■□□□□ 0.92
USP4-208ENST00000464168 NAXEQ8NCW5 288 aa20.78■□□□□ 0.92
USP4-208ENST00000464168 HUS1BQ8NHY5 278 aa20.78■□□□□ 0.92
USP4-208ENST00000464168 UBTD2Q8WUN7 234 aa20.78■□□□□ 0.92
USP4-208ENST00000464168 JSRP1Q96MG2 331 aaPredicted RBP20.78■□□□□ 0.92
USP4-208ENST00000464168 GAL3ST4Q96RP7 486 aa20.78■□□□□ 0.92
USP4-208ENST00000464168 ERVK-6Q9BXR3 956 aa20.78■□□□□ 0.92
USP4-208ENST00000464168 WWTR1Q9GZV5 400 aa20.78■□□□□ 0.92
USP4-208ENST00000464168 SAYSD1Q9NPB0 183 aa20.78■□□□□ 0.92
USP4-208ENST00000464168 NUDT4Q9NZJ9 180 aa20.78■□□□□ 0.92
USP4-208ENST00000464168 OPTCQ9UBM4 332 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms