RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 TYK2P29597 1187 aa13.28□□□□□ -0.28
SNRNP40-203ENST00000463988 GALNSP34059 522 aa13.28□□□□□ -0.28
SNRNP40-203ENST00000463988 SERPINB8P50452 374 aa13.28□□□□□ -0.28
SNRNP40-203ENST00000463988 HNRNPH2P55795 449 aaKnown RBP13.28□□□□□ -0.28
SNRNP40-203ENST00000463988 RPS13P62277 151 aaKnown RBP13.28□□□□□ -0.28
SNRNP40-203ENST00000463988 SLC7A5Q01650 507 aa13.28□□□□□ -0.28
SNRNP40-203ENST00000463988 FOLH1Q04609 750 aa13.28□□□□□ -0.28
SNRNP40-203ENST00000463988 FOXO1Q12778 655 aa13.28□□□□□ -0.28
SNRNP40-203ENST00000463988 GTF2H2Q13888 395 aa13.28□□□□□ -0.28
SNRNP40-203ENST00000463988 SPRED3Q2MJR0 410 aa13.28□□□□□ -0.28
SNRNP40-203ENST00000463988 ZNF791Q3KP31 576 aaPredicted RBP13.28□□□□□ -0.28
SNRNP40-203ENST00000463988 EMC4Q5J8M3 183 aa13.28□□□□□ -0.28
SNRNP40-203ENST00000463988 C10orf62Q5T681 223 aaPredicted RBP13.28□□□□□ -0.28
SNRNP40-203ENST00000463988 C18orf63Q68DL7 685 aa13.28□□□□□ -0.28
SNRNP40-203ENST00000463988 C8orf74Q6P047 294 aa13.28□□□□□ -0.28
SNRNP40-203ENST00000463988 GTF2H2CQ6P1K8 395 aa13.28□□□□□ -0.28
SNRNP40-203ENST00000463988 ACAD11Q709F0 780 aa13.28□□□□□ -0.28
SNRNP40-203ENST00000463988 C17orf53Q8N3J3 647 aaPredicted RBP13.28□□□□□ -0.28
SNRNP40-203ENST00000463988 FAM109AQ8N4B1 249 aa13.28□□□□□ -0.28
SNRNP40-203ENST00000463988 RNF175Q8N4F7 328 aa13.28□□□□□ -0.28
SNRNP40-203ENST00000463988 SLC22A8Q8TCC7 542 aa13.28□□□□□ -0.28
SNRNP40-203ENST00000463988 RND1Q92730 232 aa13.28□□□□□ -0.28
SNRNP40-203ENST00000463988 FUT8Q9BYC5 575 aa13.28□□□□□ -0.28
SNRNP40-203ENST00000463988 TSPYL1Q9H0U9 437 aa13.28□□□□□ -0.28
SNRNP40-203ENST00000463988 IPPKQ9H8X2 491 aa13.28□□□□□ -0.28
SNRNP40-203ENST00000463988 SH2D2AQ9NP31 389 aa13.28□□□□□ -0.28
SNRNP40-203ENST00000463988 ASB4Q9Y574 426 aa13.28□□□□□ -0.28
SNRNP40-203ENST00000463988 A0A0A6YYD5 115 aa13.27□□□□□ -0.29
SNRNP40-203ENST00000463988 BCKDKO14874 412 aa13.27□□□□□ -0.29
SNRNP40-203ENST00000463988 SUSD5O60279 629 aa13.27□□□□□ -0.29
SNRNP40-203ENST00000463988 CHRNB4P30926 498 aa13.27□□□□□ -0.29
SNRNP40-203ENST00000463988 BSGP35613 385 aa13.27□□□□□ -0.29
SNRNP40-203ENST00000463988 ASPHQ12797 758 aa13.27□□□□□ -0.29
SNRNP40-203ENST00000463988 CPSF6Q16630 551 aaKnown RBP eCLIP13.27□□□□□ -0.29
SNRNP40-203ENST00000463988 GXYLT1Q4G148 440 aa13.27□□□□□ -0.29
SNRNP40-203ENST00000463988 SLC22A10Q63ZE4 541 aa13.27□□□□□ -0.29
SNRNP40-203ENST00000463988 FAM47EQ6ZV65 393 aa13.27□□□□□ -0.29
SNRNP40-203ENST00000463988 GOLGA7Q7Z5G4 137 aa13.27□□□□□ -0.29
SNRNP40-203ENST00000463988 C9orf40Q8IXQ3 194 aa13.27□□□□□ -0.29
SNRNP40-203ENST00000463988 TMEM251Q8N6I4 163 aa13.27□□□□□ -0.29
SNRNP40-203ENST00000463988 LILRB4Q8NHJ6 448 aa13.27□□□□□ -0.29
SNRNP40-203ENST00000463988 WDR20Q8TBZ3 569 aa13.27□□□□□ -0.29
SNRNP40-203ENST00000463988 ISL2Q96A47 359 aa13.27□□□□□ -0.29
SNRNP40-203ENST00000463988 PPWD1Q96BP3 646 aaKnown RBP13.27□□□□□ -0.29
SNRNP40-203ENST00000463988 MRRFQ96E11 262 aaKnown RBP13.27□□□□□ -0.29
SNRNP40-203ENST00000463988 LRRC1Q9BTT6 524 aa13.27□□□□□ -0.29
SNRNP40-203ENST00000463988 NINJ2Q9NZG7 142 aa13.27□□□□□ -0.29
SNRNP40-203ENST00000463988 TMCO1Q9UM00 188 aa13.27□□□□□ -0.29
SNRNP40-203ENST00000463988 ANKRD17O75179 2603 aaKnown RBP13.26□□□□□ -0.29
SNRNP40-203ENST00000463988 IQANK1A0A1B0GTG1 560 aa13.26□□□□□ -0.29
SNRNP40-203ENST00000463988 A0A1W2PR48 441 aa13.26□□□□□ -0.29
SNRNP40-203ENST00000463988 LRRC14BA6NHZ5 514 aa13.26□□□□□ -0.29
SNRNP40-203ENST00000463988 OR6C76A6NM76 312 aa13.26□□□□□ -0.29
SNRNP40-203ENST00000463988 G3V3Y1 287 aa13.26□□□□□ -0.29
SNRNP40-203ENST00000463988 TMPRSS11DO60235 418 aa13.26□□□□□ -0.29
SNRNP40-203ENST00000463988 EEDO75530 441 aaKnown RBP13.26□□□□□ -0.29
SNRNP40-203ENST00000463988 SEMA3DO95025 777 aa13.26□□□□□ -0.29
SNRNP40-203ENST00000463988 CLDN9O95484 217 aa13.26□□□□□ -0.29
SNRNP40-203ENST00000463988 NADKO95544 446 aaPredicted RBP13.26□□□□□ -0.29
SNRNP40-203ENST00000463988 RBP1P09455 135 aa13.26□□□□□ -0.29
SNRNP40-203ENST00000463988 FAM58BPP0C7Q3 252 aa13.26□□□□□ -0.29
SNRNP40-203ENST00000463988 SLC35E2P0CK97 266 aa13.26□□□□□ -0.29
SNRNP40-203ENST00000463988 CCL3P10147 92 aa13.26□□□□□ -0.29
SNRNP40-203ENST00000463988 NR2F6P10588 404 aa13.26□□□□□ -0.29
SNRNP40-203ENST00000463988 CAPN3P20807 821 aa13.26□□□□□ -0.29
SNRNP40-203ENST00000463988 MAGEA12P43365 314 aa13.26□□□□□ -0.29
SNRNP40-203ENST00000463988 NR0B1P51843 470 aaKnown RBP13.26□□□□□ -0.29
SNRNP40-203ENST00000463988 UAP1Q16222 522 aaPredicted RBP13.26□□□□□ -0.29
SNRNP40-203ENST00000463988 TECRLQ5HYJ1 363 aa13.26□□□□□ -0.29
SNRNP40-203ENST00000463988 CYP20A1Q6UW02 462 aa13.26□□□□□ -0.29
SNRNP40-203ENST00000463988 LYPD8Q6UX82 237 aa13.26□□□□□ -0.29
SNRNP40-203ENST00000463988 DGAT2L6Q6ZPD8 337 aa13.26□□□□□ -0.29
SNRNP40-203ENST00000463988 TRILQ7L0X0 811 aa13.26□□□□□ -0.29
SNRNP40-203ENST00000463988 NUDT13Q86X67 352 aa13.26□□□□□ -0.29
SNRNP40-203ENST00000463988 PAQR8Q8TEZ7 354 aa13.26□□□□□ -0.29
SNRNP40-203ENST00000463988 SLC44A1Q8WWI5 657 aa13.26□□□□□ -0.29
SNRNP40-203ENST00000463988 SREK1Q8WXA9 508 aaKnown RBP13.26□□□□□ -0.29
SNRNP40-203ENST00000463988 SPACA9Q96E40 222 aaPredicted RBP13.26□□□□□ -0.29
SNRNP40-203ENST00000463988 SMC6Q96SB8 1091 aa13.26□□□□□ -0.29
SNRNP40-203ENST00000463988 SERPINI1Q99574 410 aa13.26□□□□□ -0.29
SNRNP40-203ENST00000463988 WDR41Q9HAD4 459 aa13.26□□□□□ -0.29
SNRNP40-203ENST00000463988 CPSF2Q9P2I0 782 aaKnown RBP13.26□□□□□ -0.29
SNRNP40-203ENST00000463988 MTRF1LQ9UGC7 380 aaKnown RBP13.26□□□□□ -0.29
SNRNP40-203ENST00000463988 RNF6Q9Y252 685 aa13.26□□□□□ -0.29
SNRNP40-203ENST00000463988 RNF11Q9Y3C5 154 aa13.26□□□□□ -0.29
SNRNP40-203ENST00000463988 SPG11Q96JI7 2443 aa13.25□□□□□ -0.29
SNRNP40-203ENST00000463988 F8P00451 2351 aa13.25□□□□□ -0.29
SNRNP40-203ENST00000463988 PHF3Q92576 2039 aaKnown RBP13.25□□□□□ -0.29
SNRNP40-203ENST00000463988 FIGNL2A6NMB9 653 aa13.25□□□□□ -0.29
SNRNP40-203ENST00000463988 NPIPA2E9PIF3 369 aa13.25□□□□□ -0.29
SNRNP40-203ENST00000463988 NPIPA3F8WFD2 350 aa13.25□□□□□ -0.29
SNRNP40-203ENST00000463988 STX16-NPEPL1H3BU86 382 aa13.25□□□□□ -0.29
SNRNP40-203ENST00000463988 HRKO00198 91 aa13.25□□□□□ -0.29
SNRNP40-203ENST00000463988 AQP7O14520 342 aa13.25□□□□□ -0.29
SNRNP40-203ENST00000463988 STX16O14662 325 aa13.25□□□□□ -0.29
SNRNP40-203ENST00000463988 OR10H2O60403 315 aa13.25□□□□□ -0.29
SNRNP40-203ENST00000463988 HCN1O60741 890 aa13.25□□□□□ -0.29
SNRNP40-203ENST00000463988 SIX3O95343 332 aaPredicted RBP13.25□□□□□ -0.29
SNRNP40-203ENST00000463988 FBXO45P0C2W1 286 aa13.25□□□□□ -0.29
SNRNP40-203ENST00000463988 COL6A2P12110 1019 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms