RNA–Protein interactions for RNA: ENST00000463741.1

SREBF2-205, Transcript of sterol regulatory element binding transcription factor 2, human

TSL 2

Gene SREBF2, Length 634 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF2-205	ENST00000463741	ZNF597	Q96LX8	424 aa		13.86	□□□□□ -0.19
SREBF2-205	ENST00000463741	KRT12	Q99456	494 aa		13.86	□□□□□ -0.19
SREBF2-205	ENST00000463741	TBCD	Q9BTW9	1192 aa		13.86	□□□□□ -0.19
SREBF2-205	ENST00000463741	MS4A8	Q9BY19	250 aa		13.86	□□□□□ -0.19
SREBF2-205	ENST00000463741	PHACTR1	Q9C0D0	580 aa		13.86	□□□□□ -0.19
SREBF2-205	ENST00000463741	DDX47	Q9H0S4	455 aa	Known RBP	13.86	□□□□□ -0.19
SREBF2-205	ENST00000463741	PROK2	Q9HC23	129 aa		13.86	□□□□□ -0.19
SREBF2-205	ENST00000463741	QPCTL	Q9NXS2	382 aa		13.86	□□□□□ -0.19
SREBF2-205	ENST00000463741	CNIH4	Q9P003	139 aa		13.86	□□□□□ -0.19
SREBF2-205	ENST00000463741	FOXD3	Q9UJU5	478 aa	Predicted RBP	13.86	□□□□□ -0.19
SREBF2-205	ENST00000463741	JRKL	Q9Y4A0	524 aa		13.86	□□□□□ -0.19
SREBF2-205	ENST00000463741	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	13.86	□□□□□ -0.19
SREBF2-205	ENST00000463741	NSD1	Q96L73	2696 aa	Predicted RBP	13.86	□□□□□ -0.19
SREBF2-205	ENST00000463741	SAP18	O00422	153 aa	Known RBP	13.85	□□□□□ -0.19
SREBF2-205	ENST00000463741	EPPIN	O95925	133 aa		13.85	□□□□□ -0.19
SREBF2-205	ENST00000463741	IL2RA	P01589	272 aa		13.85	□□□□□ -0.19
SREBF2-205	ENST00000463741	PCNA	P12004	261 aa		13.85	□□□□□ -0.19
SREBF2-205	ENST00000463741	CEACAM8	P31997	349 aa	Predicted RBP	13.85	□□□□□ -0.19
SREBF2-205	ENST00000463741	ZNF136	P52737	540 aa		13.85	□□□□□ -0.19
SREBF2-205	ENST00000463741	SLC12A2	P55011	1212 aa		13.85	□□□□□ -0.19
SREBF2-205	ENST00000463741	HERVK_113	P63132	956 aa		13.85	□□□□□ -0.19
SREBF2-205	ENST00000463741	ERVK-8	P63133	956 aa		13.85	□□□□□ -0.19
SREBF2-205	ENST00000463741	CRYZ	Q08257	329 aa	Known RBP	13.85	□□□□□ -0.19
SREBF2-205	ENST00000463741	MGAT5	Q09328	741 aa		13.85	□□□□□ -0.19
SREBF2-205	ENST00000463741	DAZAP2	Q15038	168 aa	Predicted RBP	13.85	□□□□□ -0.19
SREBF2-205	ENST00000463741	HIST2H2AC	Q16777	129 aa	Predicted RBP	13.85	□□□□□ -0.19
SREBF2-205	ENST00000463741	AP5B1	Q2VPB7	878 aa		13.85	□□□□□ -0.19
SREBF2-205	ENST00000463741	HIST2H2AA3	Q6FI13	130 aa		13.85	□□□□□ -0.19
SREBF2-205	ENST00000463741	SLC29A4	Q7RTT9	530 aa		13.85	□□□□□ -0.19
SREBF2-205	ENST00000463741	ANKMY2	Q8IV38	441 aa		13.85	□□□□□ -0.19
SREBF2-205	ENST00000463741	DND1	Q8IYX4	353 aa	Known RBP	13.85	□□□□□ -0.19
SREBF2-205	ENST00000463741	SLC15A4	Q8N697	577 aa		13.85	□□□□□ -0.19
SREBF2-205	ENST00000463741	LINC01560	Q8TB33	94 aa		13.85	□□□□□ -0.19
SREBF2-205	ENST00000463741	EXT2	Q93063	718 aa		13.85	□□□□□ -0.19
SREBF2-205	ENST00000463741	RBM18	Q96H35	190 aa	Known RBP	13.85	□□□□□ -0.19
SREBF2-205	ENST00000463741	FBXL20	Q96IG2	436 aa		13.85	□□□□□ -0.19
SREBF2-205	ENST00000463741	ERVK-6	Q9BXR3	956 aa		13.85	□□□□□ -0.19
SREBF2-205	ENST00000463741	DERL2	Q9GZP9	239 aa		13.85	□□□□□ -0.19
SREBF2-205	ENST00000463741	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	13.85	□□□□□ -0.19	4e-7	■■■■■ 44
SREBF2-205	ENST00000463741	ZNF629	Q9UEG4	869 aa	Predicted RBP	13.85	□□□□□ -0.19
SREBF2-205	ENST00000463741	CAMK2A	Q9UQM7	478 aa		13.85	□□□□□ -0.19
SREBF2-205	ENST00000463741	ERVK-19	Q9WJR5	959 aa		13.85	□□□□□ -0.19
SREBF2-205	ENST00000463741	PPP2R2C	Q9Y2T4	447 aa		13.85	□□□□□ -0.19
SREBF2-205	ENST00000463741	TEX264	Q9Y6I9	313 aa		13.85	□□□□□ -0.19
SREBF2-205	ENST00000463741	AHRR	A9YTQ3	701 aa		13.84	□□□□□ -0.19
SREBF2-205	ENST00000463741	CCNT2	O60583	730 aa	Known RBP	13.84	□□□□□ -0.19
SREBF2-205	ENST00000463741	PRKRA	O75569	313 aa	Known RBP	13.84	□□□□□ -0.19
SREBF2-205	ENST00000463741	STK16	O75716	305 aa		13.84	□□□□□ -0.19
SREBF2-205	ENST00000463741	TRAPPC6A	O75865	159 aa		13.84	□□□□□ -0.19
SREBF2-205	ENST00000463741	SCEL	O95171	688 aa		13.84	□□□□□ -0.19
SREBF2-205	ENST00000463741	TGFB1	P01137	390 aa		13.84	□□□□□ -0.19
SREBF2-205	ENST00000463741	INHBB	P09529	407 aa		13.84	□□□□□ -0.19
SREBF2-205	ENST00000463741	FBXO45	P0C2W1	286 aa		13.84	□□□□□ -0.19
SREBF2-205	ENST00000463741	EPX	P11678	715 aa		13.84	□□□□□ -0.19
SREBF2-205	ENST00000463741	SERPINB3	P29508	390 aa		13.84	□□□□□ -0.19
SREBF2-205	ENST00000463741	TIMP3	P35625	211 aa		13.84	□□□□□ -0.19
SREBF2-205	ENST00000463741	GGT5	P36269	586 aa		13.84	□□□□□ -0.19
SREBF2-205	ENST00000463741	AGFG1	P52594	562 aa	Known RBP	13.84	□□□□□ -0.19
SREBF2-205	ENST00000463741	DCAF7	P61962	342 aa		13.84	□□□□□ -0.19
SREBF2-205	ENST00000463741	IGLV3-21	P80748	117 aa	Predicted RBP	13.84	□□□□□ -0.19
SREBF2-205	ENST00000463741	IRF8	Q02556	426 aa		13.84	□□□□□ -0.19
SREBF2-205	ENST00000463741	CHIT1	Q13231	466 aa		13.84	□□□□□ -0.19
SREBF2-205	ENST00000463741	LAPTM5	Q13571	262 aa		13.84	□□□□□ -0.19
SREBF2-205	ENST00000463741	MORF4L2	Q15014	288 aa		13.84	□□□□□ -0.19
SREBF2-205	ENST00000463741	POU4F3	Q15319	338 aa		13.84	□□□□□ -0.19
SREBF2-205	ENST00000463741	PCBP2	Q15366	365 aa	Known RBP eCLIP	13.84	□□□□□ -0.19
SREBF2-205	ENST00000463741	TMEM35A	Q53FP2	167 aa		13.84	□□□□□ -0.19
SREBF2-205	ENST00000463741	POMZP3	Q6PJE2	187 aa		13.84	□□□□□ -0.19
SREBF2-205	ENST00000463741	CLEC9A	Q6UXN8	241 aa		13.84	□□□□□ -0.19
SREBF2-205	ENST00000463741	RNF111	Q6ZNA4	994 aa		13.84	□□□□□ -0.19
SREBF2-205	ENST00000463741	KIF18B	Q86Y91	864 aa		13.84	□□□□□ -0.19
SREBF2-205	ENST00000463741	GPSM1	Q86YR5	675 aa		13.84	□□□□□ -0.19
SREBF2-205	ENST00000463741	BBOF1	Q8ND07	529 aa		13.84	□□□□□ -0.19
SREBF2-205	ENST00000463741	ACTRT1	Q8TDG2	376 aa		13.84	□□□□□ -0.19
SREBF2-205	ENST00000463741	ZNF473	Q8WTR7	871 aa	Known RBP	13.84	□□□□□ -0.19
SREBF2-205	ENST00000463741	DIO2	Q92813	273 aa		13.84	□□□□□ -0.19
SREBF2-205	ENST00000463741	WDR34	Q96EX3	536 aa		13.84	□□□□□ -0.19
SREBF2-205	ENST00000463741	TRIB1	Q96RU8	372 aa		13.84	□□□□□ -0.19
SREBF2-205	ENST00000463741	OSBPL9	Q96SU4	736 aa		13.84	□□□□□ -0.19
SREBF2-205	ENST00000463741	TIMP4	Q99727	224 aa		13.84	□□□□□ -0.19
SREBF2-205	ENST00000463741	YIPF4	Q9BSR8	244 aa		13.84	□□□□□ -0.19
SREBF2-205	ENST00000463741	SORBS1	Q9BX66	1292 aa	Known RBP	13.84	□□□□□ -0.19
SREBF2-205	ENST00000463741	WWTR1	Q9GZV5	400 aa		13.84	□□□□□ -0.19
SREBF2-205	ENST00000463741	RPF2	Q9H7B2	306 aa	Known RBP	13.84	□□□□□ -0.19
SREBF2-205	ENST00000463741	CAB39L	Q9H9S4	337 aa		13.84	□□□□□ -0.19
SREBF2-205	ENST00000463741	POPDC3	Q9HBV1	291 aa		13.84	□□□□□ -0.19
SREBF2-205	ENST00000463741	CD274	Q9NZQ7	290 aa		13.84	□□□□□ -0.19
SREBF2-205	ENST00000463741	CNOT11	Q9UKZ1	510 aa	Known RBP	13.84	□□□□□ -0.19
SREBF2-205	ENST00000463741	KIAA1549	Q9HCM3	1950 aa		13.83	□□□□□ -0.19
SREBF2-205	ENST00000463741	IQANK1	A0A1B0GTG1	560 aa		13.83	□□□□□ -0.2
SREBF2-205	ENST00000463741	CLCA1	A8K7I4	914 aa		13.83	□□□□□ -0.2
SREBF2-205	ENST00000463741	ALOX15	P16050	662 aa	Predicted RBP	13.83	□□□□□ -0.2
SREBF2-205	ENST00000463741	EPOR	P19235	508 aa		13.83	□□□□□ -0.2
SREBF2-205	ENST00000463741	HOXC12	P31275	282 aa		13.83	□□□□□ -0.2
SREBF2-205	ENST00000463741	TNFRSF17	Q02223	184 aa		13.83	□□□□□ -0.2
SREBF2-205	ENST00000463741	EBP	Q15125	230 aa	Known RBP	13.83	□□□□□ -0.2
SREBF2-205	ENST00000463741	TOMM20	Q15388	145 aa		13.83	□□□□□ -0.2
SREBF2-205	ENST00000463741	NTRK2	Q16620	822 aa		13.83	□□□□□ -0.2
SREBF2-205	ENST00000463741	TMEM198	Q66K66	360 aa		13.83	□□□□□ -0.2
SREBF2-205	ENST00000463741	CHSY3	Q70JA7	882 aa		13.83	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms