RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 MLF1P58340 268 aa16.47■□□□□ 0.23
VPS52-214ENST00000463486 MAGOHP61326 146 aaKnown RBP16.47■□□□□ 0.23
VPS52-214ENST00000463486 TLE1Q04724 770 aa16.47■□□□□ 0.23
VPS52-214ENST00000463486 BTKQ06187 659 aa16.47■□□□□ 0.23
VPS52-214ENST00000463486 ACSM2AQ08AH3 577 aa16.47■□□□□ 0.23
VPS52-214ENST00000463486 ZNF750Q32MQ0 723 aa16.47■□□□□ 0.23
VPS52-214ENST00000463486 PRR30Q53SZ7 412 aaPredicted RBP16.47■□□□□ 0.23
VPS52-214ENST00000463486 ZNF468Q5VIY5 522 aaPredicted RBP16.47■□□□□ 0.23
VPS52-214ENST00000463486 ABHD17BQ5VST6 288 aa16.47■□□□□ 0.23
VPS52-214ENST00000463486 ACSM2BQ68CK6 577 aa16.47■□□□□ 0.23
VPS52-214ENST00000463486 CLYBLQ8N0X4 340 aa16.47■□□□□ 0.23
VPS52-214ENST00000463486 BEST3Q8N1M1 668 aa16.47■□□□□ 0.23
VPS52-214ENST00000463486 C7orf57Q8NEG2 295 aa16.47■□□□□ 0.23
VPS52-214ENST00000463486 OR1N1Q8NGS0 311 aa16.47■□□□□ 0.23
VPS52-214ENST00000463486 SLC2A12Q8TD20 617 aa16.47■□□□□ 0.23
VPS52-214ENST00000463486 DAZLQ92904 295 aaKnown RBP16.47■□□□□ 0.23
VPS52-214ENST00000463486 VMP1Q96GC9 406 aa16.47■□□□□ 0.23
VPS52-214ENST00000463486 SENP5Q96HI0 755 aaPredicted RBP16.47■□□□□ 0.23
VPS52-214ENST00000463486 ZNF681Q96N22 645 aa16.47■□□□□ 0.23
VPS52-214ENST00000463486 CDCP1Q9H5V8 836 aa16.47■□□□□ 0.23
VPS52-214ENST00000463486 WDR41Q9HAD4 459 aa16.47■□□□□ 0.23
VPS52-214ENST00000463486 KCNK9Q9NPC2 374 aa16.47■□□□□ 0.23
VPS52-214ENST00000463486 CLCA3PQ9Y6N3 262 aa16.47■□□□□ 0.23
VPS52-214ENST00000463486 TRBV11-1A0A0K0K1C0 115 aa16.46■□□□□ 0.23
VPS52-214ENST00000463486 TMEM120BA0PK00 339 aa16.46■□□□□ 0.23
VPS52-214ENST00000463486 C1orf226A1L170 272 aa16.46■□□□□ 0.23
VPS52-214ENST00000463486 PCDH7O60245 1069 aa16.46■□□□□ 0.23
VPS52-214ENST00000463486 CRCPO75575 148 aa16.46■□□□□ 0.23
VPS52-214ENST00000463486 LYPLA1O75608 230 aaPredicted RBP16.46■□□□□ 0.23
VPS52-214ENST00000463486 F10P00742 488 aa16.46■□□□□ 0.23
VPS52-214ENST00000463486 CLPSP04118 112 aa16.46■□□□□ 0.23
VPS52-214ENST00000463486 GALNSP34059 522 aa16.46■□□□□ 0.23
VPS52-214ENST00000463486 CLCN2P51788 898 aa16.46■□□□□ 0.23
VPS52-214ENST00000463486 TAS2R50P59544 299 aa16.46■□□□□ 0.23
VPS52-214ENST00000463486 DUSP2Q05923 314 aa16.46■□□□□ 0.23
VPS52-214ENST00000463486 CHI3L2Q15782 390 aa16.46■□□□□ 0.23
VPS52-214ENST00000463486 MEP1AQ16819 746 aa16.46■□□□□ 0.23
VPS52-214ENST00000463486 PRSS53Q2L4Q9 553 aa16.46■□□□□ 0.23
VPS52-214ENST00000463486 ZNF227Q86WZ6 799 aa16.46■□□□□ 0.23
VPS52-214ENST00000463486 SLC5A8Q8N695 610 aa16.46■□□□□ 0.23
VPS52-214ENST00000463486 FAM76AQ8TAV0 307 aa16.46■□□□□ 0.23
VPS52-214ENST00000463486 C16orf78Q8WTQ4 265 aa16.46■□□□□ 0.23
VPS52-214ENST00000463486 METTL2AQ96IZ6 378 aaKnown RBP16.46■□□□□ 0.23
VPS52-214ENST00000463486 FCRL1Q96LA6 429 aa16.46■□□□□ 0.23
VPS52-214ENST00000463486 BARD1Q99728 777 aaKnown RBP16.46■□□□□ 0.23
VPS52-214ENST00000463486 DEFB126Q9BYW3 111 aa16.46■□□□□ 0.23
VPS52-214ENST00000463486 TRIM45Q9H8W5 580 aaPredicted RBP16.46■□□□□ 0.23
VPS52-214ENST00000463486 EML4Q9HC35 981 aaKnown RBP16.46■□□□□ 0.23
VPS52-214ENST00000463486 TEKT2Q9UIF3 430 aa16.46■□□□□ 0.23
VPS52-214ENST00000463486 EXO1Q9UQ84 846 aaKnown RBP16.46■□□□□ 0.23
VPS52-214ENST00000463486 DLGAP4Q9Y2H0 992 aa16.46■□□□□ 0.23
VPS52-214ENST00000463486 OR5H15A6NDH6 313 aa16.45■□□□□ 0.22
VPS52-214ENST00000463486 GUCY1B2O75343 617 aa16.45■□□□□ 0.22
VPS52-214ENST00000463486 SERPINE1P05121 402 aa16.45■□□□□ 0.22
VPS52-214ENST00000463486 IL3P08700 152 aa16.45■□□□□ 0.22
VPS52-214ENST00000463486 ANXA4P09525 319 aaPredicted RBP16.45■□□□□ 0.22
VPS52-214ENST00000463486 LINC00032P0C843 101 aa16.45■□□□□ 0.22
VPS52-214ENST00000463486 TNNI3P19429 210 aa16.45■□□□□ 0.22
VPS52-214ENST00000463486 TRHRP34981 398 aaPredicted RBP16.45■□□□□ 0.22
VPS52-214ENST00000463486 CD96P40200 585 aa16.45■□□□□ 0.22
VPS52-214ENST00000463486 XKP51811 444 aa16.45■□□□□ 0.22
VPS52-214ENST00000463486 MGAT2Q10469 447 aa16.45■□□□□ 0.22
VPS52-214ENST00000463486 TUBA3CQ13748 450 aa16.45■□□□□ 0.22
VPS52-214ENST00000463486 ZNF169Q14929 603 aaPredicted RBP16.45■□□□□ 0.22
VPS52-214ENST00000463486 TLR1Q15399 786 aa16.45■□□□□ 0.22
VPS52-214ENST00000463486 SPRED3Q2MJR0 410 aa16.45■□□□□ 0.22
VPS52-214ENST00000463486 XKR7Q5GH72 579 aa16.45■□□□□ 0.22
VPS52-214ENST00000463486 SPDYAQ5MJ70 313 aa16.45■□□□□ 0.22
VPS52-214ENST00000463486 SH2D4BQ5SQS7 431 aa16.45■□□□□ 0.22
VPS52-214ENST00000463486 AGBL2Q5U5Z8 902 aa16.45■□□□□ 0.22
VPS52-214ENST00000463486 NOXRED1Q6NXP6 359 aa16.45■□□□□ 0.22
VPS52-214ENST00000463486 TUBA3EQ6PEY2 450 aa16.45■□□□□ 0.22
VPS52-214ENST00000463486 C16orf47Q6ZP98 133 aaPredicted RBP16.45■□□□□ 0.22
VPS52-214ENST00000463486 OR4K14Q8NGD5 310 aa16.45■□□□□ 0.22
VPS52-214ENST00000463486 DOK4Q8TEW6 326 aa16.45■□□□□ 0.22
VPS52-214ENST00000463486 RBM18Q96H35 190 aaKnown RBP16.45■□□□□ 0.22
VPS52-214ENST00000463486 C3orf30Q96M34 536 aa16.45■□□□□ 0.22
VPS52-214ENST00000463486 DGAT2Q96PD7 388 aa16.45■□□□□ 0.22
VPS52-214ENST00000463486 SORT1Q99523 831 aa16.45■□□□□ 0.22
VPS52-214ENST00000463486 EBPLQ9BY08 206 aa16.45■□□□□ 0.22
VPS52-214ENST00000463486 OR8D2Q9GZM6 311 aa16.45■□□□□ 0.22
VPS52-214ENST00000463486 STMN4Q9H169 189 aaPredicted RBP16.45■□□□□ 0.22
VPS52-214ENST00000463486 NTNG1Q9Y2I2 539 aa16.45■□□□□ 0.22
VPS52-214ENST00000463486 FIS1Q9Y3D6 152 aa16.45■□□□□ 0.22
VPS52-214ENST00000463486 SHANK1Q9Y566 2161 aa16.45■□□□□ 0.22
VPS52-214ENST00000463486 SLC28A1O00337 649 aa16.44■□□□□ 0.22
VPS52-214ENST00000463486 PIP5K1BO14986 540 aa16.44■□□□□ 0.22
VPS52-214ENST00000463486 ZFAND5O76080 213 aa16.44■□□□□ 0.22
VPS52-214ENST00000463486 CT62P0C5K7 136 aa16.44■□□□□ 0.22
VPS52-214ENST00000463486 CPMP14384 443 aa16.44■□□□□ 0.22
VPS52-214ENST00000463486 DRD2P14416 443 aa16.44■□□□□ 0.22
VPS52-214ENST00000463486 S1PR1P21453 382 aa16.44■□□□□ 0.22
VPS52-214ENST00000463486 BGNP21810 368 aa16.44■□□□□ 0.22
VPS52-214ENST00000463486 TACR1P25103 407 aa16.44■□□□□ 0.22
VPS52-214ENST00000463486 ARG2P78540 354 aa16.44■□□□□ 0.22
VPS52-214ENST00000463486 FOXK1P85037 733 aa16.44■□□□□ 0.22
VPS52-214ENST00000463486 PLIN5Q00G26 463 aa16.44■□□□□ 0.22
VPS52-214ENST00000463486 INPP5JQ15735 1006 aaPredicted RBP16.44■□□□□ 0.22
VPS52-214ENST00000463486 RFTN2Q52LD8 501 aaPredicted RBP16.44■□□□□ 0.22
VPS52-214ENST00000463486 FAM71E1Q6IPT2 247 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms