RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 PHF12Q96QT6 1004 aa13.47□□□□□ -0.25
COL6A1-202ENST00000463060 SPSB2Q99619 263 aa13.47□□□□□ -0.25
COL6A1-202ENST00000463060 RBCK1Q9BYM8 510 aa13.47□□□□□ -0.25
COL6A1-202ENST00000463060 GLIPR2Q9H4G4 154 aa13.47□□□□□ -0.25
COL6A1-202ENST00000463060 WDR54Q9H977 334 aa13.47□□□□□ -0.25
COL6A1-202ENST00000463060 PRTFDC1Q9NRG1 225 aa13.47□□□□□ -0.25
COL6A1-202ENST00000463060 C14orf105Q9NVL8 296 aa13.47□□□□□ -0.25
COL6A1-202ENST00000463060 SLAMF8Q9P0V8 285 aa13.47□□□□□ -0.25
COL6A1-202ENST00000463060 IFT80Q9P2H3 777 aaPredicted RBP13.47□□□□□ -0.25
COL6A1-202ENST00000463060 LEF1Q9UJU2 399 aaPredicted RBP13.47□□□□□ -0.25
COL6A1-202ENST00000463060 NEUROG3Q9Y4Z2 214 aa13.47□□□□□ -0.25
COL6A1-202ENST00000463060 CCDC88CQ9P219 2028 aa13.46□□□□□ -0.25
COL6A1-202ENST00000463060 TRBV5-3A0A0A0MS03 114 aa13.46□□□□□ -0.25
COL6A1-202ENST00000463060 A0A1W2PRB8 838 aa13.46□□□□□ -0.25
COL6A1-202ENST00000463060 FXYD1O00168 92 aa13.46□□□□□ -0.25
COL6A1-202ENST00000463060 ERAL1O75616 437 aaKnown RBP13.46□□□□□ -0.25
COL6A1-202ENST00000463060 KLF7O75840 302 aaPredicted RBP13.46□□□□□ -0.25
COL6A1-202ENST00000463060 ZCCHC18P0CG32 403 aa13.46□□□□□ -0.25
COL6A1-202ENST00000463060 C8orf89P0DMQ9 161 aa13.46□□□□□ -0.25
COL6A1-202ENST00000463060 ESRRAP11474 423 aaPredicted RBP13.46□□□□□ -0.25
COL6A1-202ENST00000463060 CPMP14384 443 aa13.46□□□□□ -0.25
COL6A1-202ENST00000463060 CSNK2A2P19784 350 aaPredicted RBP13.46□□□□□ -0.25
COL6A1-202ENST00000463060 EFNA1P20827 205 aaPredicted RBP13.46□□□□□ -0.25
COL6A1-202ENST00000463060 CALB2P22676 271 aa13.46□□□□□ -0.25
COL6A1-202ENST00000463060 PPP2R1BP30154 601 aa13.46□□□□□ -0.25
COL6A1-202ENST00000463060 CPOXP36551 454 aa13.46□□□□□ -0.25
COL6A1-202ENST00000463060 TRPC1P48995 793 aa13.46□□□□□ -0.25
COL6A1-202ENST00000463060 FOXK2Q01167 660 aa13.46□□□□□ -0.25
COL6A1-202ENST00000463060 LRRC74AQ0VAA2 488 aa13.46□□□□□ -0.25
COL6A1-202ENST00000463060 BIKQ13323 160 aa13.46□□□□□ -0.25
COL6A1-202ENST00000463060 LACTB2Q53H82 288 aaPredicted RBP13.46□□□□□ -0.25
COL6A1-202ENST00000463060 LRIF1Q5T3J3 769 aa13.46□□□□□ -0.25
COL6A1-202ENST00000463060 REP15Q6BDI9 236 aa13.46□□□□□ -0.25
COL6A1-202ENST00000463060 HACD2Q6Y1H2 254 aa13.46□□□□□ -0.25
COL6A1-202ENST00000463060 FBXO27Q8NI29 283 aa13.46□□□□□ -0.25
COL6A1-202ENST00000463060 OR5P2Q8WZ92 322 aa13.46□□□□□ -0.25
COL6A1-202ENST00000463060 MR1Q95460 341 aa13.46□□□□□ -0.25
COL6A1-202ENST00000463060 KLHL29Q96CT2 875 aa13.46□□□□□ -0.25
COL6A1-202ENST00000463060 ZBED6CLQ96FA7 236 aaPredicted RBP13.46□□□□□ -0.25
COL6A1-202ENST00000463060 NPAS2Q99743 824 aa13.46□□□□□ -0.25
COL6A1-202ENST00000463060 INPP5KQ9BT40 448 aa13.46□□□□□ -0.25
COL6A1-202ENST00000463060 YIPF2Q9BWQ6 316 aa13.46□□□□□ -0.25
COL6A1-202ENST00000463060 VN1R1Q9GZP7 353 aa13.46□□□□□ -0.25
COL6A1-202ENST00000463060 PAIP1Q9H074 479 aaKnown RBP13.46□□□□□ -0.25
COL6A1-202ENST00000463060 EFCAB1Q9HAE3 211 aa13.46□□□□□ -0.25
COL6A1-202ENST00000463060 SLC6A13Q9NSD5 602 aa13.46□□□□□ -0.25
COL6A1-202ENST00000463060 NUP214P35658 2090 aaPredicted RBP13.46□□□□□ -0.26
COL6A1-202ENST00000463060 A0A096LPI6 279 aa13.45□□□□□ -0.26
COL6A1-202ENST00000463060 MRASO14807 208 aa13.45□□□□□ -0.26
COL6A1-202ENST00000463060 CDC123O75794 336 aaPredicted RBP13.45□□□□□ -0.26
COL6A1-202ENST00000463060 UNC5CO95185 931 aa13.45□□□□□ -0.26
COL6A1-202ENST00000463060 C6orf47O95873 294 aa13.45□□□□□ -0.26
COL6A1-202ENST00000463060 NPPAP01160 153 aa13.45□□□□□ -0.26
COL6A1-202ENST00000463060 ATP1B1P05026 303 aa13.45□□□□□ -0.26
COL6A1-202ENST00000463060 CYC1P08574 325 aa13.45□□□□□ -0.26
COL6A1-202ENST00000463060 RAB40ALP0C0E4 278 aa13.45□□□□□ -0.26
COL6A1-202ENST00000463060 SLC35E2P0CK97 266 aa13.45□□□□□ -0.26
COL6A1-202ENST00000463060 PORP16435 677 aaPredicted RBP13.45□□□□□ -0.26
COL6A1-202ENST00000463060 MAOAP21397 527 aa13.45□□□□□ -0.26
COL6A1-202ENST00000463060 CD82P27701 267 aa13.45□□□□□ -0.26
COL6A1-202ENST00000463060 MPIP34949 423 aa13.45□□□□□ -0.26
COL6A1-202ENST00000463060 FEN1P39748 380 aaKnown RBP13.45□□□□□ -0.26
COL6A1-202ENST00000463060 CDKN2CP42773 168 aa13.45□□□□□ -0.26
COL6A1-202ENST00000463060 CPA2P48052 419 aa13.45□□□□□ -0.26
COL6A1-202ENST00000463060 MNAT1P51948 309 aa13.45□□□□□ -0.26
COL6A1-202ENST00000463060 FOXL2P58012 376 aa13.45□□□□□ -0.26
COL6A1-202ENST00000463060 HBA1P69905 142 aa13.45□□□□□ -0.26
COL6A1-202ENST00000463060 ID2Q02363 134 aa13.45□□□□□ -0.26
COL6A1-202ENST00000463060 OCA2Q04671 838 aa13.45□□□□□ -0.26
COL6A1-202ENST00000463060 MGAT2Q10469 447 aa13.45□□□□□ -0.26
COL6A1-202ENST00000463060 MLIPQ5VWP3 458 aa13.45□□□□□ -0.26
COL6A1-202ENST00000463060 ZNF551Q7Z340 670 aaPredicted RBP13.45□□□□□ -0.26
COL6A1-202ENST00000463060 YTHDF3Q7Z739 585 aaKnown RBP13.45□□□□□ -0.26
COL6A1-202ENST00000463060 ANKRD46Q86W74 232 aa13.45□□□□□ -0.26
COL6A1-202ENST00000463060 MSRB3Q8IXL7 192 aa13.45□□□□□ -0.26
COL6A1-202ENST00000463060 CCDC116Q8IYX3 515 aa13.45□□□□□ -0.26
COL6A1-202ENST00000463060 LRRC25Q8N386 305 aaPredicted RBP13.45□□□□□ -0.26
COL6A1-202ENST00000463060 ESX1Q8N693 406 aa13.45□□□□□ -0.26
COL6A1-202ENST00000463060 VPS37AQ8NEZ2 397 aa13.45□□□□□ -0.26
COL6A1-202ENST00000463060 DNAJB8Q8NHS0 232 aa13.45□□□□□ -0.26
COL6A1-202ENST00000463060 ITCHQ96J02 903 aa13.45□□□□□ -0.26
COL6A1-202ENST00000463060 BBS4Q96RK4 519 aa13.45□□□□□ -0.26
COL6A1-202ENST00000463060 GPATCH1Q9BRR8 931 aaKnown RBP13.45□□□□□ -0.26
COL6A1-202ENST00000463060 ALOXE3Q9BYJ1 711 aa13.45□□□□□ -0.26
COL6A1-202ENST00000463060 FAM117AQ9C073 453 aa13.45□□□□□ -0.26
COL6A1-202ENST00000463060 RMND5AQ9H871 391 aa13.45□□□□□ -0.26
COL6A1-202ENST00000463060 SIRT3Q9NTG7 399 aaPredicted RBP13.45□□□□□ -0.26
COL6A1-202ENST00000463060 TAS2R1Q9NYW7 299 aa13.45□□□□□ -0.26
COL6A1-202ENST00000463060 SLC25A37Q9NYZ2 338 aa13.45□□□□□ -0.26
COL6A1-202ENST00000463060 NXT1Q9UKK6 140 aaKnown RBP13.45□□□□□ -0.26
COL6A1-202ENST00000463060 KLK13Q9UKR3 277 aa13.45□□□□□ -0.26
COL6A1-202ENST00000463060 GMEB1Q9Y692 573 aa13.45□□□□□ -0.26
COL6A1-202ENST00000463060 ZNF780BQ9Y6R6 833 aa13.45□□□□□ -0.26
COL6A1-202ENST00000463060 WDFY3Q8IZQ1 3526 aa13.44□□□□□ -0.26
COL6A1-202ENST00000463060 SPTBN4Q9H254 2564 aa13.44□□□□□ -0.26
COL6A1-202ENST00000463060 TCRBV16S1A1N1A0A5B0 115 aa13.44□□□□□ -0.26
COL6A1-202ENST00000463060 TRABD2BA6NFA1 517 aa13.44□□□□□ -0.26
COL6A1-202ENST00000463060 AIM2O14862 343 aa13.44□□□□□ -0.26
COL6A1-202ENST00000463060 ANGPT2O15123 496 aa13.44□□□□□ -0.26
COL6A1-202ENST00000463060 ERN1O75460 977 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms