RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 GOLGA8OA6NCC3 632 aa7.01□□□□□ -1.29
UBE4B-204ENST00000462658 KRT87PA6NCN2 255 aa7.01□□□□□ -1.29
UBE4B-204ENST00000462658 GOLGA8NF8WBI6 632 aa7.01□□□□□ -1.29
UBE4B-204ENST00000462658 OR7A17O14581 309 aa7.01□□□□□ -1.29
UBE4B-204ENST00000462658 SCAMP1O15126 338 aa7.01□□□□□ -1.29
UBE4B-204ENST00000462658 CCDC22O60826 627 aa7.01□□□□□ -1.29
UBE4B-204ENST00000462658 SKAP2O75563 359 aaPredicted RBP7.01□□□□□ -1.29
UBE4B-204ENST00000462658 KIAA0754O94854 1291 aa7.01□□□□□ -1.29
UBE4B-204ENST00000462658 WDR47O94967 919 aa7.01□□□□□ -1.29
UBE4B-204ENST00000462658 OR4F21O95013 312 aa7.01□□□□□ -1.29
UBE4B-204ENST00000462658 SLC16A8O95907 504 aa7.01□□□□□ -1.29
UBE4B-204ENST00000462658 OTCP00480 354 aa7.01□□□□□ -1.29
UBE4B-204ENST00000462658 TNFP01375 233 aa7.01□□□□□ -1.29
UBE4B-204ENST00000462658 RPN2P04844 631 aa7.01□□□□□ -1.29
UBE4B-204ENST00000462658 SLC35G4P0C7Q5 338 aa7.01□□□□□ -1.29
UBE4B-204ENST00000462658 THEGLP0DJG4 465 aa7.01□□□□□ -1.29
UBE4B-204ENST00000462658 UROSP10746 265 aa7.01□□□□□ -1.29
UBE4B-204ENST00000462658 CD27P26842 260 aa7.01□□□□□ -1.29
UBE4B-204ENST00000462658 IMPA1P29218 277 aa7.01□□□□□ -1.29
UBE4B-204ENST00000462658 PRDX3P30048 256 aaKnown RBP7.01□□□□□ -1.29
UBE4B-204ENST00000462658 ARL1P40616 181 aaPredicted RBP7.01□□□□□ -1.29
UBE4B-204ENST00000462658 SLC6A12P48065 614 aa7.01□□□□□ -1.29
UBE4B-204ENST00000462658 CCNG1P51959 295 aa7.01□□□□□ -1.29
UBE4B-204ENST00000462658 FOXA1P55317 472 aa7.01□□□□□ -1.29
UBE4B-204ENST00000462658 HNRNPH2P55795 449 aaKnown RBP7.01□□□□□ -1.29
UBE4B-204ENST00000462658 EEFSECP57772 596 aaKnown RBP7.01□□□□□ -1.29
UBE4B-204ENST00000462658 ERVPABLB-1P60509 514 aa7.01□□□□□ -1.29
UBE4B-204ENST00000462658 BTKQ06187 659 aa7.01□□□□□ -1.29
UBE4B-204ENST00000462658 NAE1Q13564 534 aa7.01□□□□□ -1.29
UBE4B-204ENST00000462658 FHL3Q13643 280 aa7.01□□□□□ -1.29
UBE4B-204ENST00000462658 PTK2BQ14289 1009 aa7.01□□□□□ -1.29
UBE4B-204ENST00000462658 UGT3A2Q3SY77 523 aa7.01□□□□□ -1.29
UBE4B-204ENST00000462658 CAPRIN2Q6IMN6 1127 aaKnown RBP7.01□□□□□ -1.29
UBE4B-204ENST00000462658 AGTRAPQ6RW13 159 aa7.01□□□□□ -1.29
UBE4B-204ENST00000462658 SLC36A4Q6YBV0 504 aa7.01□□□□□ -1.29
UBE4B-204ENST00000462658 LRRC70Q7Z2Q7 622 aa7.01□□□□□ -1.29
UBE4B-204ENST00000462658 EFL1Q7Z2Z2 1120 aaKnown RBP7.01□□□□□ -1.29
UBE4B-204ENST00000462658 AMIGO2Q86SJ2 522 aa7.01□□□□□ -1.29
UBE4B-204ENST00000462658 GBP7Q8N8V2 638 aaPredicted RBP7.01□□□□□ -1.29
UBE4B-204ENST00000462658 SNX31Q8N9S9 440 aa7.01□□□□□ -1.29
UBE4B-204ENST00000462658 OR4F6Q8NGB9 312 aa7.01□□□□□ -1.29
UBE4B-204ENST00000462658 OR52B6Q8NGF0 335 aa7.01□□□□□ -1.29
UBE4B-204ENST00000462658 OR5AR1Q8NGP9 310 aa7.01□□□□□ -1.29
UBE4B-204ENST00000462658 RAD51AP1Q96B01 352 aa7.01□□□□□ -1.29
UBE4B-204ENST00000462658 SKA1Q96BD8 255 aa7.01□□□□□ -1.29
UBE4B-204ENST00000462658 PYCR2Q96C36 320 aa7.01□□□□□ -1.29
UBE4B-204ENST00000462658 ERP27Q96DN0 273 aa7.01□□□□□ -1.29
UBE4B-204ENST00000462658 PDXPQ96GD0 296 aa7.01□□□□□ -1.29
UBE4B-204ENST00000462658 OR52B2Q96RD2 323 aa7.01□□□□□ -1.29
UBE4B-204ENST00000462658 KCNA7Q96RP8 456 aa7.01□□□□□ -1.29
UBE4B-204ENST00000462658 CCDC28BQ9BUN5 200 aa7.01□□□□□ -1.29
UBE4B-204ENST00000462658 NTMT1Q9BV86 223 aa7.01□□□□□ -1.29
UBE4B-204ENST00000462658 PCDHAC1Q9H158 963 aa7.01□□□□□ -1.29
UBE4B-204ENST00000462658 MYLK2Q9H1R3 596 aa7.01□□□□□ -1.29
UBE4B-204ENST00000462658 WDR55Q9H6Y2 383 aaPredicted RBP7.01□□□□□ -1.29
UBE4B-204ENST00000462658 MEAF6Q9HAF1 191 aa7.01□□□□□ -1.29
UBE4B-204ENST00000462658 TCF7L2Q9NQB0 619 aa7.01□□□□□ -1.29
UBE4B-204ENST00000462658 DNAJC11Q9NVH1 559 aa7.01□□□□□ -1.29
UBE4B-204ENST00000462658 STOX2Q9P2F5 926 aaPredicted RBP7.01□□□□□ -1.29
UBE4B-204ENST00000462658 CIDEBQ9UHD4 219 aa7.01□□□□□ -1.29
UBE4B-204ENST00000462658 SLC22A14Q9Y267 594 aa7.01□□□□□ -1.29
UBE4B-204ENST00000462658 WDR37Q9Y2I8 494 aa7.01□□□□□ -1.29
UBE4B-204ENST00000462658 TDRKHQ9Y2W6 561 aaKnown RBP7.01□□□□□ -1.29
UBE4B-204ENST00000462658 TIMM22Q9Y584 194 aa7.01□□□□□ -1.29
UBE4B-204ENST00000462658 DNAJC15Q9Y5T4 150 aa7.01□□□□□ -1.29
UBE4B-204ENST00000462658 DNAH14Q0VDD8 3507 aa7.01□□□□□ -1.29
UBE4B-204ENST00000462658 GPR179Q6PRD1 2367 aa7.01□□□□□ -1.29
UBE4B-204ENST00000462658 SPTY2D1-AS1A0A0U1RR47 76 aa7□□□□□ -1.29
UBE4B-204ENST00000462658 PDZK1P1A8MUH7 402 aa7□□□□□ -1.29
UBE4B-204ENST00000462658 PSMD9O00233 223 aa7□□□□□ -1.29
UBE4B-204ENST00000462658 SDHDO14521 159 aa7□□□□□ -1.29
UBE4B-204ENST00000462658 FCHO1O14526 889 aa7□□□□□ -1.29
UBE4B-204ENST00000462658 PIP5K1BO14986 540 aa7□□□□□ -1.29
UBE4B-204ENST00000462658 CLDN9O95484 217 aa7□□□□□ -1.29
UBE4B-204ENST00000462658 ENO1P06733 434 aaKnown RBP7□□□□□ -1.29
UBE4B-204ENST00000462658 SERPINA6P08185 405 aa7□□□□□ -1.29
UBE4B-204ENST00000462658 NCF2P19878 526 aaPredicted RBP7□□□□□ -1.29
UBE4B-204ENST00000462658 HTR3AP46098 478 aa7□□□□□ -1.29
UBE4B-204ENST00000462658 DMTNQ08495 405 aa7□□□□□ -1.29
UBE4B-204ENST00000462658 DMWDQ09019 674 aa7□□□□□ -1.29
UBE4B-204ENST00000462658 CDC16Q13042 620 aa7□□□□□ -1.29
UBE4B-204ENST00000462658 TRAF3Q13114 568 aa7□□□□□ -1.29
UBE4B-204ENST00000462658 PRKG2Q13237 762 aa7□□□□□ -1.29
UBE4B-204ENST00000462658 KRT33BQ14525 404 aa7□□□□□ -1.29
UBE4B-204ENST00000462658 CLCA4Q14CN2 919 aa7□□□□□ -1.29
UBE4B-204ENST00000462658 ALG11Q2TAA5 492 aa7□□□□□ -1.29
UBE4B-204ENST00000462658 GALNTL6Q49A17 601 aa7□□□□□ -1.29
UBE4B-204ENST00000462658 METTL21CQ5VZV1 264 aa7□□□□□ -1.29
UBE4B-204ENST00000462658 FAM219BQ5XKK7 198 aa7□□□□□ -1.29
UBE4B-204ENST00000462658 CAPN13Q6MZZ7 669 aaPredicted RBP7□□□□□ -1.29
UBE4B-204ENST00000462658 ANKRD16Q6P6B7 361 aa7□□□□□ -1.29
UBE4B-204ENST00000462658 WDR53Q7Z5U6 358 aaPredicted RBP7□□□□□ -1.29
UBE4B-204ENST00000462658 YTHDF3Q7Z739 585 aaKnown RBP7□□□□□ -1.29
UBE4B-204ENST00000462658 THOC6Q86W42 341 aaKnown RBP7□□□□□ -1.29
UBE4B-204ENST00000462658 DCUN1D3Q8IWE4 304 aa7□□□□□ -1.29
UBE4B-204ENST00000462658 CCDC28AQ8IWP9 274 aa7□□□□□ -1.29
UBE4B-204ENST00000462658 DDIASQ8IXT1 998 aa7□□□□□ -1.29
UBE4B-204ENST00000462658 KLHDC8AQ8IYD2 350 aa7□□□□□ -1.29
UBE4B-204ENST00000462658 SYTL1Q8IYJ3 562 aa7□□□□□ -1.29
UBE4B-204ENST00000462658 TBC1D21Q8IYX1 336 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms