RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 CYP20A1Q6UW02 462 aa17.54■□□□□ 0.4
VARS-220ENST00000461874 ST13P4Q8IZP2 240 aaPredicted RBP17.54■□□□□ 0.4
VARS-220ENST00000461874 GOLM1Q8NBJ4 401 aa17.54■□□□□ 0.4
VARS-220ENST00000461874 OR2M7Q8NG81 312 aa17.54■□□□□ 0.4
VARS-220ENST00000461874 UHMK1Q8TAS1 419 aaKnown RBP17.54■□□□□ 0.4
VARS-220ENST00000461874 PHF10Q8WUB8 498 aaKnown RBP17.54■□□□□ 0.4
VARS-220ENST00000461874 MTFMTQ96DP5 389 aaKnown RBP17.54■□□□□ 0.4
VARS-220ENST00000461874 FBXL20Q96IG2 436 aa17.54■□□□□ 0.4
VARS-220ENST00000461874 ART5Q96L15 291 aa17.54■□□□□ 0.4
VARS-220ENST00000461874 NSUN5Q96P11 429 aaKnown RBP17.54■□□□□ 0.4
VARS-220ENST00000461874 SERPINI1Q99574 410 aa17.54■□□□□ 0.4
VARS-220ENST00000461874 VKORC1Q9BQB6 163 aa17.54■□□□□ 0.4
VARS-220ENST00000461874 MRPL57Q9BQC6 102 aaKnown RBP17.54■□□□□ 0.4
VARS-220ENST00000461874 ZBTB26Q9HCK0 441 aa17.54■□□□□ 0.4
VARS-220ENST00000461874 CHST11Q9NPF2 352 aa17.54■□□□□ 0.4
VARS-220ENST00000461874 LRBAP50851 2863 aa17.53■□□□□ 0.4
VARS-220ENST00000461874 PKDREJQ9NTG1 2253 aa17.53■□□□□ 0.4
VARS-220ENST00000461874 NCOA6Q14686 2063 aaPredicted RBP17.53■□□□□ 0.4
VARS-220ENST00000461874 GLOD5A6NK44 160 aa17.53■□□□□ 0.4
VARS-220ENST00000461874 CDC40O60508 579 aaKnown RBP eCLIP17.53■□□□□ 0.4
VARS-220ENST00000461874 SEMA3DO95025 777 aa17.53■□□□□ 0.4
VARS-220ENST00000461874 NR2F6P10588 404 aa17.53■□□□□ 0.4
VARS-220ENST00000461874 CNR1P21554 472 aa17.53■□□□□ 0.4
VARS-220ENST00000461874 ARL1P40616 181 aaPredicted RBP17.53■□□□□ 0.4
VARS-220ENST00000461874 PPIAP62937 165 aaKnown RBP17.53■□□□□ 0.4
VARS-220ENST00000461874 TRAF3Q13114 568 aa17.53■□□□□ 0.4
VARS-220ENST00000461874 FRG2Q64ET8 278 aa17.53■□□□□ 0.4
VARS-220ENST00000461874 C3P1Q6ZMU1 363 aa17.53■□□□□ 0.4
VARS-220ENST00000461874 NCCRP1Q6ZVX7 275 aaPredicted RBP17.53■□□□□ 0.4
VARS-220ENST00000461874 NUDT13Q86X67 352 aa17.53■□□□□ 0.4
VARS-220ENST00000461874 C9orf40Q8IXQ3 194 aa17.53■□□□□ 0.4
VARS-220ENST00000461874 EID3Q8N140 333 aa17.53■□□□□ 0.4
VARS-220ENST00000461874 FAM57AQ8TBR7 257 aa17.53■□□□□ 0.4
VARS-220ENST00000461874 FRG2BQ96QU4 278 aa17.53■□□□□ 0.4
VARS-220ENST00000461874 DMRTA2Q96SC8 542 aa17.53■□□□□ 0.4
VARS-220ENST00000461874 PELOQ9BRX2 385 aaKnown RBP17.53■□□□□ 0.4
VARS-220ENST00000461874 G3V3Y1 287 aa17.52■□□□□ 0.4
VARS-220ENST00000461874 KIF2AO00139 706 aaPredicted RBP17.52■□□□□ 0.4
VARS-220ENST00000461874 PDE9AO76083 593 aa17.52■□□□□ 0.4
VARS-220ENST00000461874 GLSO94925 669 aaPredicted RBP17.52■□□□□ 0.4
VARS-220ENST00000461874 AIFM1O95831 613 aa17.52■□□□□ 0.4
VARS-220ENST00000461874 SNRPAP09012 282 aaKnown RBP17.52■□□□□ 0.4
VARS-220ENST00000461874 PLGLB1Q02325 96 aa17.52■□□□□ 0.4
VARS-220ENST00000461874 ASPHQ12797 758 aa17.52■□□□□ 0.4
VARS-220ENST00000461874 CDSNQ15517 529 aa17.52■□□□□ 0.4
VARS-220ENST00000461874 SPRED3Q2MJR0 410 aa17.52■□□□□ 0.4
VARS-220ENST00000461874 C10orf62Q5T681 223 aaPredicted RBP17.52■□□□□ 0.4
VARS-220ENST00000461874 ARHGAP11AQ6P4F7 1023 aa17.52■□□□□ 0.4
VARS-220ENST00000461874 RGS9BPQ6ZS82 235 aa17.52■□□□□ 0.4
VARS-220ENST00000461874 TMEM151AQ8N4L1 468 aa17.52■□□□□ 0.4
VARS-220ENST00000461874 DOK4Q8TEW6 326 aa17.52■□□□□ 0.4
VARS-220ENST00000461874 UCN3Q969E3 161 aa17.52■□□□□ 0.4
VARS-220ENST00000461874 FAM173AQ9BQD7 235 aa17.52■□□□□ 0.4
VARS-220ENST00000461874 DEFB127Q9H1M4 99 aa17.52■□□□□ 0.4
VARS-220ENST00000461874 MRPL46Q9H2W6 279 aaKnown RBP17.52■□□□□ 0.4
VARS-220ENST00000461874 RUBCNLQ9H714 662 aa17.52■□□□□ 0.4
VARS-220ENST00000461874 ZDHHC11Q9H8X9 412 aa17.52■□□□□ 0.4
VARS-220ENST00000461874 WDR41Q9HAD4 459 aa17.52■□□□□ 0.4
VARS-220ENST00000461874 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.52■□□□□ 0.4
VARS-220ENST00000461874 HRH3Q9Y5N1 445 aa17.52■□□□□ 0.4
VARS-220ENST00000461874 FAM166BA8MTA8 275 aa17.51■□□□□ 0.39
VARS-220ENST00000461874 OR10H2O60403 315 aa17.51■□□□□ 0.39
VARS-220ENST00000461874 CLDN14O95500 239 aa17.51■□□□□ 0.39
VARS-220ENST00000461874 GBAP04062 536 aa17.51■□□□□ 0.39
VARS-220ENST00000461874 TPOP07202 933 aa17.51■□□□□ 0.39
VARS-220ENST00000461874 RPS17P08708 135 aaKnown RBP17.51■□□□□ 0.39
VARS-220ENST00000461874 ABHD2P08910 425 aa17.51■□□□□ 0.39
VARS-220ENST00000461874 SBK3P0C264 359 aa17.51■□□□□ 0.39
VARS-220ENST00000461874 GALNSP34059 522 aa17.51■□□□□ 0.39
VARS-220ENST00000461874 NR0B1P51843 470 aaKnown RBP17.51■□□□□ 0.39
VARS-220ENST00000461874 HERVK_113P63132 956 aa17.51■□□□□ 0.39
VARS-220ENST00000461874 ERVK-8P63133 956 aa17.51■□□□□ 0.39
VARS-220ENST00000461874 IFT88Q13099 833 aa17.51■□□□□ 0.39
VARS-220ENST00000461874 ZNF267Q14586 743 aaPredicted RBP17.51■□□□□ 0.39
VARS-220ENST00000461874 ZNF791Q3KP31 576 aaPredicted RBP17.51■□□□□ 0.39
VARS-220ENST00000461874 GGTA1PQ4G0N0 100 aa17.51■□□□□ 0.39
VARS-220ENST00000461874 NDUFAF5Q5TEU4 345 aa17.51■□□□□ 0.39
VARS-220ENST00000461874 TTC19Q6DKK2 380 aaPredicted RBP17.51■□□□□ 0.39
VARS-220ENST00000461874 GK5Q6ZS86 529 aa17.51■□□□□ 0.39
VARS-220ENST00000461874 MILR1Q7Z6M3 343 aa17.51■□□□□ 0.39
VARS-220ENST00000461874 CD163Q86VB7 1156 aa17.51■□□□□ 0.39
VARS-220ENST00000461874 SLC22A16Q86VW1 577 aa17.51■□□□□ 0.39
VARS-220ENST00000461874 MCEMP1Q8IX19 187 aa17.51■□□□□ 0.39
VARS-220ENST00000461874 RIT1Q92963 219 aa17.51■□□□□ 0.39
VARS-220ENST00000461874 CNPPD1Q9BV87 410 aa17.51■□□□□ 0.39
VARS-220ENST00000461874 ERVK-6Q9BXR3 956 aa17.51■□□□□ 0.39
VARS-220ENST00000461874 TTTY12Q9BZ98 90 aa17.51■□□□□ 0.39
VARS-220ENST00000461874 SEMA4BQ9NPR2 832 aaPredicted RBP17.51■□□□□ 0.39
VARS-220ENST00000461874 SACM1LQ9NTJ5 587 aa17.51■□□□□ 0.39
VARS-220ENST00000461874 ADAM29Q9UKF5 820 aa17.51■□□□□ 0.39
VARS-220ENST00000461874 NFU1Q9UMS0 254 aa17.51■□□□□ 0.39
VARS-220ENST00000461874 ERVK-19Q9WJR5 959 aa17.51■□□□□ 0.39
VARS-220ENST00000461874 ZNF407Q9C0G0 2248 aa17.5■□□□□ 0.39
VARS-220ENST00000461874 IQANK1A0A1B0GTG1 560 aa17.5■□□□□ 0.39
VARS-220ENST00000461874 EXOC1LA0A1B0GW35 172 aa17.5■□□□□ 0.39
VARS-220ENST00000461874 ACOT7O00154 380 aa17.5■□□□□ 0.39
VARS-220ENST00000461874 PGRMC2O15173 223 aa17.5■□□□□ 0.39
VARS-220ENST00000461874 NADKO95544 446 aaPredicted RBP17.5■□□□□ 0.39
VARS-220ENST00000461874 P04436 131 aa17.5■□□□□ 0.39
VARS-220ENST00000461874 SLC35E2P0CK97 266 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms