RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 RNF4P78317 190 aa15.84■□□□□ 0.13
TOP3A-202ENST00000461127 RCN2Q14257 317 aa15.84■□□□□ 0.13
TOP3A-202ENST00000461127 CRYMQ14894 314 aa15.84■□□□□ 0.13
TOP3A-202ENST00000461127 RBBP5Q15291 538 aaKnown RBP15.84■□□□□ 0.13
TOP3A-202ENST00000461127 STEAP4Q687X5 459 aa15.84■□□□□ 0.13
TOP3A-202ENST00000461127 C3orf62Q6ZUJ4 267 aa15.84■□□□□ 0.13
TOP3A-202ENST00000461127 PM20D2Q8IYS1 436 aa15.84■□□□□ 0.13
TOP3A-202ENST00000461127 ANKRD53Q8N9V6 530 aa15.84■□□□□ 0.13
TOP3A-202ENST00000461127 OR56A3Q8NH54 315 aa15.84■□□□□ 0.13
TOP3A-202ENST00000461127 NEIL2Q969S2 332 aa15.84■□□□□ 0.13
TOP3A-202ENST00000461127 ISL2Q96A47 359 aa15.84■□□□□ 0.13
TOP3A-202ENST00000461127 KIAA1191Q96A73 305 aa15.84■□□□□ 0.13
TOP3A-202ENST00000461127 TRIM54Q9BYV2 358 aa15.84■□□□□ 0.13
TOP3A-202ENST00000461127 SPNS1Q9H2V7 528 aa15.84■□□□□ 0.13
TOP3A-202ENST00000461127 CLDN16Q9Y5I7 305 aa15.84■□□□□ 0.13
TOP3A-202ENST00000461127 B3GALT2O43825 422 aa15.83■□□□□ 0.12
TOP3A-202ENST00000461127 RFPL3SP0C7P2 107 aa15.83■□□□□ 0.12
TOP3A-202ENST00000461127 TNNI3P19429 210 aa15.83■□□□□ 0.12
TOP3A-202ENST00000461127 CTSSP25774 331 aa15.83■□□□□ 0.12
TOP3A-202ENST00000461127 SSTR1P30872 391 aa15.83■□□□□ 0.12
TOP3A-202ENST00000461127 STX2P32856 288 aa15.83■□□□□ 0.12
TOP3A-202ENST00000461127 TRPC1P48995 793 aa15.83■□□□□ 0.12
TOP3A-202ENST00000461127 AP1S2P56377 157 aa15.83■□□□□ 0.12
TOP3A-202ENST00000461127 GPX6P59796 221 aa15.83■□□□□ 0.12
TOP3A-202ENST00000461127 REEP5Q00765 189 aa15.83■□□□□ 0.12
TOP3A-202ENST00000461127 HDXQ7Z353 690 aa15.83■□□□□ 0.12
TOP3A-202ENST00000461127 CLNKQ7Z7G1 428 aa15.83■□□□□ 0.12
TOP3A-202ENST00000461127 LRRC25Q8N386 305 aaPredicted RBP15.83■□□□□ 0.12
TOP3A-202ENST00000461127 FAM47BQ8NA70 645 aa15.83■□□□□ 0.12
TOP3A-202ENST00000461127 UHMK1Q8TAS1 419 aaKnown RBP15.83■□□□□ 0.12
TOP3A-202ENST00000461127 ATL1Q8WXF7 558 aa15.83■□□□□ 0.12
TOP3A-202ENST00000461127 GAL3ST3Q96A11 431 aa15.83■□□□□ 0.12
TOP3A-202ENST00000461127 JSRP1Q96MG2 331 aaPredicted RBP15.83■□□□□ 0.12
TOP3A-202ENST00000461127 TSNARE1Q96NA8 513 aa15.83■□□□□ 0.12
TOP3A-202ENST00000461127 OR4K3Q96R72 315 aa15.83■□□□□ 0.12
TOP3A-202ENST00000461127 PELI2Q9HAT8 420 aa15.83■□□□□ 0.12
TOP3A-202ENST00000461127 PPANQ9NQ55 473 aaKnown RBP15.83■□□□□ 0.12
TOP3A-202ENST00000461127 COPS7AQ9UBW8 275 aa15.83■□□□□ 0.12
TOP3A-202ENST00000461127 DYRK1BQ9Y463 629 aa15.83■□□□□ 0.12
TOP3A-202ENST00000461127 A0A1W2PPR1 153 aa15.82■□□□□ 0.12
TOP3A-202ENST00000461127 SH3D21A4FU49 640 aa15.82■□□□□ 0.12
TOP3A-202ENST00000461127 TRIM64A6NGJ6 449 aa15.82■□□□□ 0.12
TOP3A-202ENST00000461127 TRIM64BA6NI03 449 aa15.82■□□□□ 0.12
TOP3A-202ENST00000461127 CRLF1O75462 422 aa15.82■□□□□ 0.12
TOP3A-202ENST00000461127 IL18BPO95998 194 aa15.82■□□□□ 0.12
TOP3A-202ENST00000461127 F7P08709 466 aaPredicted RBP15.82■□□□□ 0.12
TOP3A-202ENST00000461127 ABHD2P08910 425 aa15.82■□□□□ 0.12
TOP3A-202ENST00000461127 IFFO1Q0D2I5 559 aa15.82■□□□□ 0.12
TOP3A-202ENST00000461127 STX4Q12846 297 aa15.82■□□□□ 0.12
TOP3A-202ENST00000461127 DUSP8Q13202 625 aa15.82■□□□□ 0.12
TOP3A-202ENST00000461127 RUNX2Q13950 521 aa15.82■□□□□ 0.12
TOP3A-202ENST00000461127 SLC29A2Q14542 456 aa15.82■□□□□ 0.12
TOP3A-202ENST00000461127 UAP1Q16222 522 aaPredicted RBP15.82■□□□□ 0.12
TOP3A-202ENST00000461127 MPEG1Q2M385 716 aa15.82■□□□□ 0.12
TOP3A-202ENST00000461127 NSUN5P2Q63ZY6 315 aa15.82■□□□□ 0.12
TOP3A-202ENST00000461127 LMNTD2Q8IXW0 634 aa15.82■□□□□ 0.12
TOP3A-202ENST00000461127 SLC22A8Q8TCC7 542 aa15.82■□□□□ 0.12
TOP3A-202ENST00000461127 CALML6Q8TD86 181 aa15.82■□□□□ 0.12
TOP3A-202ENST00000461127 PTPMT1Q8WUK0 201 aaPredicted RBP15.82■□□□□ 0.12
TOP3A-202ENST00000461127 RBM24Q9BX46 236 aaKnown RBP15.82■□□□□ 0.12
TOP3A-202ENST00000461127 ALOXE3Q9BYJ1 711 aa15.82■□□□□ 0.12
TOP3A-202ENST00000461127 C20orf96Q9NUD7 363 aaPredicted RBP15.82■□□□□ 0.12
TOP3A-202ENST00000461127 VTI1BQ9UEU0 232 aa15.82■□□□□ 0.12
TOP3A-202ENST00000461127 CHD3Q12873 2000 aaKnown RBP15.82■□□□□ 0.12
TOP3A-202ENST00000461127 FREM3P0C091 2139 aa15.82■□□□□ 0.12
TOP3A-202ENST00000461127 TCRBV9S1A1TA0A576 114 aa15.81■□□□□ 0.12
TOP3A-202ENST00000461127 CD8B2A6NJW9 211 aa15.81■□□□□ 0.12
TOP3A-202ENST00000461127 C4orf51C9J302 202 aa15.81■□□□□ 0.12
TOP3A-202ENST00000461127 ZNF354AO60765 605 aaPredicted RBP15.81■□□□□ 0.12
TOP3A-202ENST00000461127 ERN1O75460 977 aaKnown RBP15.81■□□□□ 0.12
TOP3A-202ENST00000461127 FPR1P21462 350 aa15.81■□□□□ 0.12
TOP3A-202ENST00000461127 GDF1P27539 372 aa15.81■□□□□ 0.12
TOP3A-202ENST00000461127 SLC1A2P43004 574 aa15.81■□□□□ 0.12
TOP3A-202ENST00000461127 CPA2P48052 419 aa15.81■□□□□ 0.12
TOP3A-202ENST00000461127 AGFG1P52594 562 aaKnown RBP15.81■□□□□ 0.12
TOP3A-202ENST00000461127 HNRNPFP52597 415 aaKnown RBP15.81■□□□□ 0.12
TOP3A-202ENST00000461127 ASPHQ12797 758 aa15.81■□□□□ 0.12
TOP3A-202ENST00000461127 CASP8Q14790 479 aa15.81■□□□□ 0.12
TOP3A-202ENST00000461127 EFTUD2Q15029 972 aaKnown RBP eCLIP15.81■□□□□ 0.12
TOP3A-202ENST00000461127 PIGGQ5H8A4 983 aa15.81■□□□□ 0.12
TOP3A-202ENST00000461127 UBAP2Q5T6F2 1119 aaKnown RBP15.81■□□□□ 0.12
TOP3A-202ENST00000461127 PRAMEF20Q5VT98 475 aa15.81■□□□□ 0.12
TOP3A-202ENST00000461127 TMPRSS11BQ86T26 416 aa15.81■□□□□ 0.12
TOP3A-202ENST00000461127 TMEM52Q8NDY8 209 aa15.81■□□□□ 0.12
TOP3A-202ENST00000461127 SLC2A12Q8TD20 617 aa15.81■□□□□ 0.12
TOP3A-202ENST00000461127 FBF1Q8TES7 1133 aa15.81■□□□□ 0.12
TOP3A-202ENST00000461127 PAQR8Q8TEZ7 354 aa15.81■□□□□ 0.12
TOP3A-202ENST00000461127 CDKL2Q92772 493 aa15.81■□□□□ 0.12
TOP3A-202ENST00000461127 TIMP4Q99727 224 aa15.81■□□□□ 0.12
TOP3A-202ENST00000461127 TAS2R13Q9NYV9 303 aa15.81■□□□□ 0.12
TOP3A-202ENST00000461127 CNIH4Q9P003 139 aa15.81■□□□□ 0.12
TOP3A-202ENST00000461127 JKAMPQ9P055 326 aa15.81■□□□□ 0.12
TOP3A-202ENST00000461127 NDRG3Q9UGV2 375 aa15.81■□□□□ 0.12
TOP3A-202ENST00000461127 CAMK2AQ9UQM7 478 aa15.81■□□□□ 0.12
TOP3A-202ENST00000461127 NINQ8N4C6 2090 aa15.8■□□□□ 0.12
TOP3A-202ENST00000461127 NCKAP5O14513 1909 aa15.8■□□□□ 0.12
TOP3A-202ENST00000461127 A0A0G2JN53 185 aa15.8■□□□□ 0.12
TOP3A-202ENST00000461127 ZCWPW2A0A1B0GU75 182 aa15.8■□□□□ 0.12
TOP3A-202ENST00000461127 C17orf105B2RV13 164 aa15.8■□□□□ 0.12
TOP3A-202ENST00000461127 KDM4EB2RXH2 506 aaPredicted RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms