RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 ACBD4Q8NC06 268 aa21.06■□□□□ 0.96
PTPN4-207ENST00000460162 ASB5Q8WWX0 329 aa21.06■□□□□ 0.96
PTPN4-207ENST00000460162 GPR78Q96P69 363 aa21.06■□□□□ 0.96
PTPN4-207ENST00000460162 ENKD1Q9H0I2 346 aa21.06■□□□□ 0.96
PTPN4-207ENST00000460162 IPPKQ9H8X2 491 aa21.06■□□□□ 0.96
PTPN4-207ENST00000460162 PSD3Q9NYI0 1048 aa21.06■□□□□ 0.96
PTPN4-207ENST00000460162 NINJ2Q9NZG7 142 aa21.06■□□□□ 0.96
PTPN4-207ENST00000460162 CPSF2Q9P2I0 782 aaKnown RBP21.06■□□□□ 0.96
PTPN4-207ENST00000460162 MTRF1LQ9UGC7 380 aaKnown RBP21.06■□□□□ 0.96
PTPN4-207ENST00000460162 TACC2O95359 2948 aa21.05■□□□□ 0.96
PTPN4-207ENST00000460162 OR14I1A6ND48 311 aa21.05■□□□□ 0.96
PTPN4-207ENST00000460162 LRRC14BA6NHZ5 514 aa21.05■□□□□ 0.96
PTPN4-207ENST00000460162 G3V3Y1 287 aa21.05■□□□□ 0.96
PTPN4-207ENST00000460162 IGHG3P01860 377 aa21.05■□□□□ 0.96
PTPN4-207ENST00000460162 P04436 131 aa21.05■□□□□ 0.96
PTPN4-207ENST00000460162 CCL3P10147 92 aa21.05■□□□□ 0.96
PTPN4-207ENST00000460162 NR2F6P10588 404 aa21.05■□□□□ 0.96
PTPN4-207ENST00000460162 ASPHQ12797 758 aa21.05■□□□□ 0.96
PTPN4-207ENST00000460162 CPSF6Q16630 551 aaKnown RBP eCLIP21.05■□□□□ 0.96
PTPN4-207ENST00000460162 HYAL4Q2M3T9 481 aa21.05■□□□□ 0.96
PTPN4-207ENST00000460162 PIGGQ5H8A4 983 aa21.05■□□□□ 0.96
PTPN4-207ENST00000460162 MRM1Q6IN84 353 aaKnown RBP21.05■□□□□ 0.96
PTPN4-207ENST00000460162 DND1Q8IYX4 353 aaKnown RBP21.05■□□□□ 0.96
PTPN4-207ENST00000460162 ZNF295-AS1Q8N0V1 137 aa21.05■□□□□ 0.96
PTPN4-207ENST00000460162 SLC15A4Q8N697 577 aa21.05■□□□□ 0.96
PTPN4-207ENST00000460162 WDR20Q8TBZ3 569 aa21.05■□□□□ 0.96
PTPN4-207ENST00000460162 ISL2Q96A47 359 aa21.05■□□□□ 0.96
PTPN4-207ENST00000460162 C14orf79Q96F83 325 aa21.05■□□□□ 0.96
PTPN4-207ENST00000460162 FUT8Q9BYC5 575 aa21.05■□□□□ 0.96
PTPN4-207ENST00000460162 DDX31Q9H8H2 851 aaKnown RBP21.05■□□□□ 0.96
PTPN4-207ENST00000460162 HRH3Q9Y5N1 445 aa21.05■□□□□ 0.96
PTPN4-207ENST00000460162 FOXE1O00358 373 aaPredicted RBP21.04■□□□□ 0.96
PTPN4-207ENST00000460162 PROM1O43490 865 aa21.04■□□□□ 0.96
PTPN4-207ENST00000460162 PRKRAO75569 313 aaKnown RBP21.04■□□□□ 0.96
PTPN4-207ENST00000460162 SEMA3DO95025 777 aa21.04■□□□□ 0.96
PTPN4-207ENST00000460162 SIX3O95343 332 aaPredicted RBP21.04■□□□□ 0.96
PTPN4-207ENST00000460162 CHRNB4P30926 498 aa21.04■□□□□ 0.96
PTPN4-207ENST00000460162 BSGP35613 385 aa21.04■□□□□ 0.96
PTPN4-207ENST00000460162 MAGEA12P43365 314 aa21.04■□□□□ 0.96
PTPN4-207ENST00000460162 FOXO1Q12778 655 aa21.04■□□□□ 0.96
PTPN4-207ENST00000460162 TBL3Q12788 808 aaKnown RBP21.04■□□□□ 0.96
PTPN4-207ENST00000460162 EMC4Q5J8M3 183 aa21.04■□□□□ 0.96
PTPN4-207ENST00000460162 CYP20A1Q6UW02 462 aa21.04■□□□□ 0.96
PTPN4-207ENST00000460162 DGAT2L6Q6ZPD8 337 aa21.04■□□□□ 0.96
PTPN4-207ENST00000460162 TMEM251Q8N6I4 163 aa21.04■□□□□ 0.96
PTPN4-207ENST00000460162 PPWD1Q96BP3 646 aaKnown RBP21.04■□□□□ 0.96
PTPN4-207ENST00000460162 SPACA9Q96E40 222 aaPredicted RBP21.04■□□□□ 0.96
PTPN4-207ENST00000460162 SMC6Q96SB8 1091 aa21.04■□□□□ 0.96
PTPN4-207ENST00000460162 VPS11Q9H270 941 aa21.04■□□□□ 0.96
PTPN4-207ENST00000460162 WDR41Q9HAD4 459 aa21.04■□□□□ 0.96
PTPN4-207ENST00000460162 TMCO1Q9UM00 188 aa21.04■□□□□ 0.96
PTPN4-207ENST00000460162 ASB4Q9Y574 426 aa21.04■□□□□ 0.96
PTPN4-207ENST00000460162 FIGNL2A6NMB9 653 aa21.03■□□□□ 0.96
PTPN4-207ENST00000460162 HRKO00198 91 aa21.03■□□□□ 0.96
PTPN4-207ENST00000460162 BCKDKO14874 412 aa21.03■□□□□ 0.96
PTPN4-207ENST00000460162 TMPRSS11DO60235 418 aa21.03■□□□□ 0.96
PTPN4-207ENST00000460162 OR10H2O60403 315 aa21.03■□□□□ 0.96
PTPN4-207ENST00000460162 EEDO75530 441 aaKnown RBP21.03■□□□□ 0.96
PTPN4-207ENST00000460162 CLDN9O95484 217 aa21.03■□□□□ 0.96
PTPN4-207ENST00000460162 NADKO95544 446 aaPredicted RBP21.03■□□□□ 0.96
PTPN4-207ENST00000460162 GPR75O95800 540 aa21.03■□□□□ 0.96
PTPN4-207ENST00000460162 INHBAP08476 426 aa21.03■□□□□ 0.96
PTPN4-207ENST00000460162 GALNSP34059 522 aa21.03■□□□□ 0.96
PTPN4-207ENST00000460162 MAGEA5P43359 124 aa21.03■□□□□ 0.96
PTPN4-207ENST00000460162 DNASE1L1P49184 302 aa21.03■□□□□ 0.96
PTPN4-207ENST00000460162 NR0B1P51843 470 aaKnown RBP21.03■□□□□ 0.96
PTPN4-207ENST00000460162 ZNF791Q3KP31 576 aaPredicted RBP21.03■□□□□ 0.96
PTPN4-207ENST00000460162 C10orf62Q5T681 223 aaPredicted RBP21.03■□□□□ 0.96
PTPN4-207ENST00000460162 TAOK1Q7L7X3 1001 aa21.03■□□□□ 0.96
PTPN4-207ENST00000460162 SLC29A4Q7RTT9 530 aa21.03■□□□□ 0.96
PTPN4-207ENST00000460162 PTGR2Q8N8N7 351 aaPredicted RBP21.03■□□□□ 0.96
PTPN4-207ENST00000460162 SLC44A1Q8WWI5 657 aa21.03■□□□□ 0.96
PTPN4-207ENST00000460162 RND1Q92730 232 aa21.03■□□□□ 0.96
PTPN4-207ENST00000460162 TREX2Q9BQ50 279 aaPredicted RBP21.03■□□□□ 0.96
PTPN4-207ENST00000460162 CNPPD1Q9BV87 410 aa21.03■□□□□ 0.96
PTPN4-207ENST00000460162 TSPYL1Q9H0U9 437 aa21.03■□□□□ 0.96
PTPN4-207ENST00000460162 SH2D2AQ9NP31 389 aa21.03■□□□□ 0.96
PTPN4-207ENST00000460162 TUBA8Q9NY65 449 aaPredicted RBP21.03■□□□□ 0.96
PTPN4-207ENST00000460162 RNF11Q9Y3C5 154 aa21.03■□□□□ 0.96
PTPN4-207ENST00000460162 LIPGQ9Y5X9 500 aa21.03■□□□□ 0.96
PTPN4-207ENST00000460162 A0A1B0GVC2 190 aa21.02■□□□□ 0.96
PTPN4-207ENST00000460162 OR6C76A6NM76 312 aa21.02■□□□□ 0.96
PTPN4-207ENST00000460162 NPIPA2E9PIF3 369 aa21.02■□□□□ 0.96
PTPN4-207ENST00000460162 NPIPA3F8WFD2 350 aa21.02■□□□□ 0.96
PTPN4-207ENST00000460162 AQP7O14520 342 aa21.02■□□□□ 0.96
PTPN4-207ENST00000460162 AIFM1O95831 613 aa21.02■□□□□ 0.96
PTPN4-207ENST00000460162 RBP1P09455 135 aa21.02■□□□□ 0.96
PTPN4-207ENST00000460162 FAM58BPP0C7Q3 252 aa21.02■□□□□ 0.96
PTPN4-207ENST00000460162 HERVK_113P63132 956 aa21.02■□□□□ 0.96
PTPN4-207ENST00000460162 ERVK-8P63133 956 aa21.02■□□□□ 0.96
PTPN4-207ENST00000460162 WHAMMP3Q1A5X7 153 aa21.02■□□□□ 0.96
PTPN4-207ENST00000460162 UBAP2Q5T6F2 1119 aaKnown RBP21.02■□□□□ 0.96
PTPN4-207ENST00000460162 OR52E8Q6IFG1 317 aa21.02■□□□□ 0.96
PTPN4-207ENST00000460162 LYPD8Q6UX82 237 aa21.02■□□□□ 0.96
PTPN4-207ENST00000460162 RNF111Q6ZNA4 994 aa21.02■□□□□ 0.96
PTPN4-207ENST00000460162 ACAD11Q709F0 780 aa21.02■□□□□ 0.96
PTPN4-207ENST00000460162 TRILQ7L0X0 811 aa21.02■□□□□ 0.96
PTPN4-207ENST00000460162 OR5M3Q8NGP4 307 aa21.02■□□□□ 0.96
PTPN4-207ENST00000460162 PAQR8Q8TEZ7 354 aa21.02■□□□□ 0.96
PTPN4-207ENST00000460162 CHTF18Q8WVB6 975 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms