RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 CLDN24A6NM45 220 aa17.21■□□□□ 0.35
HPS3-202ENST00000460120 C1QTNF3-AMACRE9PGA6 284 aa17.21■□□□□ 0.35
HPS3-202ENST00000460120 HMGN4O00479 90 aa17.21■□□□□ 0.35
HPS3-202ENST00000460120 ZW10O43264 779 aa17.21■□□□□ 0.35
HPS3-202ENST00000460120 DPM1O60762 260 aa17.21■□□□□ 0.35
HPS3-202ENST00000460120 CD72P21854 359 aa17.21■□□□□ 0.35
HPS3-202ENST00000460120 INAVAQ3KP66 663 aa17.21■□□□□ 0.35
HPS3-202ENST00000460120 ZNF404Q494X3 552 aa17.21■□□□□ 0.35
HPS3-202ENST00000460120 PIP5KL1Q5T9C9 394 aa17.21■□□□□ 0.35
HPS3-202ENST00000460120 FAM109BQ6ICB4 259 aaPredicted RBP17.21■□□□□ 0.35
HPS3-202ENST00000460120 TEFMQ96QE5 360 aaKnown RBP17.21■□□□□ 0.35
HPS3-202ENST00000460120 HCN2Q9UL51 889 aa17.21■□□□□ 0.35
HPS3-202ENST00000460120 PTNP21246 168 aa17.21■□□□□ 0.35
HPS3-202ENST00000460120 TANGO2Q6ICL3 276 aa17.21■□□□□ 0.35
HPS3-202ENST00000460120 FRMPD2BQ6IN97 320 aa17.21■□□□□ 0.35
HPS3-202ENST00000460120 ZNF765Q7L2R6 523 aa17.21■□□□□ 0.35
HPS3-202ENST00000460120 SLC46A3Q7Z3Q1 461 aa17.21■□□□□ 0.35
HPS3-202ENST00000460120 FAM83FQ8NEG4 500 aaPredicted RBP17.21■□□□□ 0.35
HPS3-202ENST00000460120 MTERF3Q96E29 417 aa17.21■□□□□ 0.35
HPS3-202ENST00000460120 ASB16Q96NS5 453 aa17.21■□□□□ 0.35
HPS3-202ENST00000460120 KCNS3Q9BQ31 491 aa17.21■□□□□ 0.35
HPS3-202ENST00000460120 SLC6A17Q9H1V8 727 aa17.21■□□□□ 0.35
HPS3-202ENST00000460120 IGFLR1Q9H665 355 aa17.21■□□□□ 0.35
HPS3-202ENST00000460120 MVB12BQ9H7P6 319 aa17.21■□□□□ 0.35
HPS3-202ENST00000460120 SIRT3Q9NTG7 399 aaPredicted RBP17.21■□□□□ 0.35
HPS3-202ENST00000460120 E9PQ18 207 aa17.2■□□□□ 0.34
HPS3-202ENST00000460120 ADAM23O75077 832 aa17.2■□□□□ 0.34
HPS3-202ENST00000460120 CNOT3O75175 753 aaKnown RBP17.2■□□□□ 0.34
HPS3-202ENST00000460120 APOL3O95236 402 aa17.2■□□□□ 0.34
HPS3-202ENST00000460120 RPLP0P05388 317 aaKnown RBP17.2■□□□□ 0.34
HPS3-202ENST00000460120 CD40LGP29965 261 aa17.2■□□□□ 0.34
HPS3-202ENST00000460120 SOX3P41225 446 aa17.2■□□□□ 0.34
HPS3-202ENST00000460120 RGS6P49758 472 aa17.2■□□□□ 0.34
HPS3-202ENST00000460120 TARDBPQ13148 414 aaKnown RBP eCLIP17.2■□□□□ 0.34
HPS3-202ENST00000460120 TMEM52BQ4KMG9 183 aa17.2■□□□□ 0.34
HPS3-202ENST00000460120 SAXO2Q658L1 398 aa17.2■□□□□ 0.34
HPS3-202ENST00000460120 TCTN3Q6NUS6 607 aa17.2■□□□□ 0.34
HPS3-202ENST00000460120 PSRC1Q6PGN9 363 aaPredicted RBP17.2■□□□□ 0.34
HPS3-202ENST00000460120 IKBIPQ70UQ0 350 aa17.2■□□□□ 0.34
HPS3-202ENST00000460120 UBE3DQ7Z6J8 389 aa17.2■□□□□ 0.34
HPS3-202ENST00000460120 ZNF784Q8NCA9 323 aaPredicted RBP17.2■□□□□ 0.34
HPS3-202ENST00000460120 OR5P2Q8WZ92 322 aa17.2■□□□□ 0.34
HPS3-202ENST00000460120 SMPDL3AQ92484 453 aa17.2■□□□□ 0.34
HPS3-202ENST00000460120 NEURL3Q96EH8 262 aa17.2■□□□□ 0.34
HPS3-202ENST00000460120 PDXPQ96GD0 296 aa17.2■□□□□ 0.34
HPS3-202ENST00000460120 INSM2Q96T92 566 aaPredicted RBP17.2■□□□□ 0.34
HPS3-202ENST00000460120 DPH7Q9BTV6 452 aa17.2■□□□□ 0.34
HPS3-202ENST00000460120 TRMT61BQ9BVS5 477 aaKnown RBP17.2■□□□□ 0.34
HPS3-202ENST00000460120 OR51I1Q9H343 314 aa17.2■□□□□ 0.34
HPS3-202ENST00000460120 EQTNQ9NQ60 294 aa17.2■□□□□ 0.34
HPS3-202ENST00000460120 CLEC2DQ9UHP7 191 aa17.2■□□□□ 0.34
HPS3-202ENST00000460120 FBXW2Q9UKT8 454 aa17.2■□□□□ 0.34
HPS3-202ENST00000460120 IFT52Q9Y366 437 aa17.2■□□□□ 0.34
HPS3-202ENST00000460120 PNMA8CA0A1B0GUJ8 204 aa17.2■□□□□ 0.34
HPS3-202ENST00000460120 A0A1W2PPV9 198 aa17.2■□□□□ 0.34
HPS3-202ENST00000460120 RFXAPO00287 272 aa17.2■□□□□ 0.34
HPS3-202ENST00000460120 DSCR3O14972 297 aa17.2■□□□□ 0.34
HPS3-202ENST00000460120 MFN2O95140 757 aa17.2■□□□□ 0.34
HPS3-202ENST00000460120 NTN1O95631 604 aa17.2■□□□□ 0.34
HPS3-202ENST00000460120 NR2F1P10589 423 aa17.2■□□□□ 0.34
HPS3-202ENST00000460120 DRD3P35462 400 aa17.2■□□□□ 0.34
HPS3-202ENST00000460120 GRK3P35626 688 aa17.2■□□□□ 0.34
HPS3-202ENST00000460120 LIMS1P48059 325 aa17.2■□□□□ 0.34
HPS3-202ENST00000460120 GPR19Q15760 415 aa17.2■□□□□ 0.34
HPS3-202ENST00000460120 DGLUCYQ7Z3D6 616 aa17.2■□□□□ 0.34
HPS3-202ENST00000460120 NUDT13Q86X67 352 aa17.2■□□□□ 0.34
HPS3-202ENST00000460120 OR8K5Q8NH50 307 aa17.2■□□□□ 0.34
HPS3-202ENST00000460120 MROQ9BYG7 248 aa17.2■□□□□ 0.34
HPS3-202ENST00000460120 FBXO8Q9NRD0 319 aa17.2■□□□□ 0.34
HPS3-202ENST00000460120 ZCCHC3Q9NUD5 404 aaKnown RBP17.2■□□□□ 0.34
HPS3-202ENST00000460120 SPTBN5Q9NRC6 3674 aaKnown RBP17.2■□□□□ 0.34
HPS3-202ENST00000460120 PRAMEF27A3QJZ7 478 aa17.2■□□□□ 0.34
HPS3-202ENST00000460120 PDZK1P1A8MUH7 402 aa17.2■□□□□ 0.34
HPS3-202ENST00000460120 CD97P48960 835 aa17.2■□□□□ 0.34
HPS3-202ENST00000460120 NCBP2P52298 156 aaKnown RBP eCLIP17.2■□□□□ 0.347e-8■■■■■ 26.9
HPS3-202ENST00000460120 TAS2R38P59533 333 aa17.2■□□□□ 0.34
HPS3-202ENST00000460120 CSNK2BP67870 215 aa17.2■□□□□ 0.34
HPS3-202ENST00000460120 KCNC4Q03721 635 aa17.2■□□□□ 0.34
HPS3-202ENST00000460120 CBX3Q13185 183 aa17.2■□□□□ 0.34
HPS3-202ENST00000460120 DCST1Q5T197 706 aa17.2■□□□□ 0.34
HPS3-202ENST00000460120 NDUFAF5Q5TEU4 345 aa17.2■□□□□ 0.34
HPS3-202ENST00000460120 METRNLQ641Q3 311 aa17.2■□□□□ 0.34
HPS3-202ENST00000460120 FCGR1BQ92637 280 aa17.2■□□□□ 0.34
HPS3-202ENST00000460120 COX14Q96I36 57 aa17.2■□□□□ 0.34
HPS3-202ENST00000460120 RMI1Q9H9A7 625 aa17.2■□□□□ 0.34
HPS3-202ENST00000460120 CLN6Q9NWW5 311 aa17.2■□□□□ 0.34
HPS3-202ENST00000460120 FTSJ1Q9UET6 329 aa17.2■□□□□ 0.34
HPS3-202ENST00000460120 TLR4O00206 839 aa17.19■□□□□ 0.34
HPS3-202ENST00000460120 PORP16435 677 aaPredicted RBP17.19■□□□□ 0.34
HPS3-202ENST00000460120 MLF2Q15773 248 aaPredicted RBP17.19■□□□□ 0.34
HPS3-202ENST00000460120 ZNF793Q6ZN11 406 aa17.19■□□□□ 0.34
HPS3-202ENST00000460120 UTS2BQ765I0 119 aa17.19■□□□□ 0.34
HPS3-202ENST00000460120 SLC34A3Q8N130 599 aa17.19■□□□□ 0.34
HPS3-202ENST00000460120 HDDC3Q8N4P3 179 aa17.19■□□□□ 0.34
HPS3-202ENST00000460120 DENND6BQ8NEG7 585 aa17.19■□□□□ 0.34
HPS3-202ENST00000460120 SMARCD2Q92925 531 aa17.19■□□□□ 0.34
HPS3-202ENST00000460120 TREX2Q9BQ50 279 aaPredicted RBP17.19■□□□□ 0.34
HPS3-202ENST00000460120 BCL7BQ9BQE9 202 aa17.19■□□□□ 0.34
HPS3-202ENST00000460120 WDR26Q9H7D7 661 aa17.19■□□□□ 0.34
HPS3-202ENST00000460120 PLCXD1Q9NUJ7 323 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms