RNA–Protein interactions for RNA: ENST00000456563.1

FAM239A-203, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 3

Gene FAM239A, Length 793 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-203ENST00000456563 TERF2Q15554 542 aa16.72■□□□□ 0.27
FAM239A-203ENST00000456563 ELAVL1Q15717 326 aaKnown RBP16.72■□□□□ 0.27
FAM239A-203ENST00000456563 CEBPEQ15744 281 aa16.72■□□□□ 0.27
FAM239A-203ENST00000456563 GSTA3Q16772 222 aa16.72■□□□□ 0.27
FAM239A-203ENST00000456563 TMEM198Q66K66 360 aa16.72■□□□□ 0.27
FAM239A-203ENST00000456563 CPZQ66K79 652 aa16.72■□□□□ 0.27
FAM239A-203ENST00000456563 PAPD4Q6PIY7 484 aaKnown RBP16.72■□□□□ 0.27
FAM239A-203ENST00000456563 RIMKLAQ8IXN7 391 aa16.72■□□□□ 0.27
FAM239A-203ENST00000456563 ST13P4Q8IZP2 240 aaPredicted RBP16.72■□□□□ 0.27
FAM239A-203ENST00000456563 TMEM102Q8N9M5 508 aaPredicted RBP16.72■□□□□ 0.27
FAM239A-203ENST00000456563 GFM2Q969S9 779 aaKnown RBP16.72■□□□□ 0.27
FAM239A-203ENST00000456563 CNRIP1Q96F85 164 aaPredicted RBP16.72■□□□□ 0.27
FAM239A-203ENST00000456563 IMMP1LQ96LU5 166 aa16.72■□□□□ 0.27
FAM239A-203ENST00000456563 ZNF681Q96N22 645 aa16.72■□□□□ 0.27
FAM239A-203ENST00000456563 DGAT2Q96PD7 388 aa16.72■□□□□ 0.27
FAM239A-203ENST00000456563 LPAR4Q99677 370 aa16.72■□□□□ 0.27
FAM239A-203ENST00000456563 TUBB6Q9BUF5 446 aa16.72■□□□□ 0.27
FAM239A-203ENST00000456563 BRINP2Q9C0B6 783 aa16.72■□□□□ 0.27
FAM239A-203ENST00000456563 SLC35C2Q9NQQ7 365 aa16.72■□□□□ 0.27
FAM239A-203ENST00000456563 MAN2B2Q9Y2E5 1009 aa16.72■□□□□ 0.27
FAM239A-203ENST00000456563 GPR45Q9Y5Y3 372 aa16.72■□□□□ 0.27
FAM239A-203ENST00000456563 ZNF780BQ9Y6R6 833 aa16.72■□□□□ 0.27
FAM239A-203ENST00000456563 SCN2AQ99250 2005 aa16.71■□□□□ 0.27
FAM239A-203ENST00000456563 NSG1A0A0A6YYJ2 146 aa16.71■□□□□ 0.27
FAM239A-203ENST00000456563 A0A0G2JND7 137 aa16.71■□□□□ 0.27
FAM239A-203ENST00000456563 MYOCOSA0A1B0GUC4 107 aa16.71■□□□□ 0.27
FAM239A-203ENST00000456563 A0A1W2PS29 197 aa16.71■□□□□ 0.27
FAM239A-203ENST00000456563 GMNCA6NCL1 334 aa16.71■□□□□ 0.27
FAM239A-203ENST00000456563 GABRR3A8MPY1 467 aa16.71■□□□□ 0.27
FAM239A-203ENST00000456563 SCAMP2O15127 329 aaKnown RBP16.71■□□□□ 0.27
FAM239A-203ENST00000456563 CPMP14384 443 aa16.71■□□□□ 0.27
FAM239A-203ENST00000456563 IDO1P14902 403 aa16.71■□□□□ 0.27
FAM239A-203ENST00000456563 PORP16435 677 aaPredicted RBP16.71■□□□□ 0.27
FAM239A-203ENST00000456563 DDX5P17844 614 aaKnown RBP16.71■□□□□ 0.27
FAM239A-203ENST00000456563 CSNK2A2P19784 350 aaPredicted RBP16.71■□□□□ 0.27
FAM239A-203ENST00000456563 HPCAL1P37235 193 aa16.71■□□□□ 0.27
FAM239A-203ENST00000456563 SEC24CP53992 1094 aa16.71■□□□□ 0.27
FAM239A-203ENST00000456563 RRADP55042 308 aa16.71■□□□□ 0.27
FAM239A-203ENST00000456563 PLIN5Q00G26 463 aa16.71■□□□□ 0.27
FAM239A-203ENST00000456563 ST3GAL2Q16842 350 aa16.71■□□□□ 0.27
FAM239A-203ENST00000456563 PRSS53Q2L4Q9 553 aa16.71■□□□□ 0.27
FAM239A-203ENST00000456563 DEFB109BQ30KR1 87 aa16.71■□□□□ 0.27
FAM239A-203ENST00000456563 DCAF10Q5QP82 559 aa16.71■□□□□ 0.27
FAM239A-203ENST00000456563 EXOSC8Q96B26 276 aaKnown RBP16.71■□□□□ 0.27
FAM239A-203ENST00000456563 PPCDCQ96CD2 204 aa16.71■□□□□ 0.27
FAM239A-203ENST00000456563 RBM18Q96H35 190 aaKnown RBP16.71■□□□□ 0.27
FAM239A-203ENST00000456563 TMEM120AQ9BXJ8 343 aa16.71■□□□□ 0.27
FAM239A-203ENST00000456563 DPY30Q9C005 99 aa16.71■□□□□ 0.27
FAM239A-203ENST00000456563 PNO1Q9NRX1 252 aaKnown RBP16.71■□□□□ 0.27
FAM239A-203ENST00000456563 GIMAP4Q9NUV9 329 aa16.71■□□□□ 0.27
FAM239A-203ENST00000456563 KLHL14Q9P2G3 628 aa16.71■□□□□ 0.27
FAM239A-203ENST00000456563 PCSK5Q92824 1860 aa16.71■□□□□ 0.27
FAM239A-203ENST00000456563 CELSR3Q9NYQ7 3312 aa16.7■□□□□ 0.26
FAM239A-203ENST00000456563 SAGE2PA6NJ88 616 aa16.7■□□□□ 0.26
FAM239A-203ENST00000456563 A8MUA0 341 aa16.7■□□□□ 0.26
FAM239A-203ENST00000456563 E9PBE3 544 aa16.7■□□□□ 0.26
FAM239A-203ENST00000456563 OR10H2O60403 315 aa16.7■□□□□ 0.26
FAM239A-203ENST00000456563 KLHL41O60662 606 aa16.7■□□□□ 0.26
FAM239A-203ENST00000456563 SEC24DO94855 1032 aaPredicted RBP16.7■□□□□ 0.26
FAM239A-203ENST00000456563 COX7A2P14406 83 aa16.7■□□□□ 0.26
FAM239A-203ENST00000456563 FEN1P39748 380 aaKnown RBP16.7■□□□□ 0.26
FAM239A-203ENST00000456563 MRPL19P49406 292 aaKnown RBP16.7■□□□□ 0.26
FAM239A-203ENST00000456563 IRX1P78414 480 aaPredicted RBP16.7■□□□□ 0.26
FAM239A-203ENST00000456563 ZNF750Q32MQ0 723 aa16.7■□□□□ 0.26
FAM239A-203ENST00000456563 PDCD4Q53EL6 469 aaKnown RBP16.7■□□□□ 0.26
FAM239A-203ENST00000456563 APLFQ8IW19 511 aaPredicted RBP16.7■□□□□ 0.26
FAM239A-203ENST00000456563 KRTCAP2Q8N6L1 136 aa16.7■□□□□ 0.26
FAM239A-203ENST00000456563 NFAM1Q8NET5 270 aaPredicted RBP16.7■□□□□ 0.26
FAM239A-203ENST00000456563 PTPMT1Q8WUK0 201 aaPredicted RBP16.7■□□□□ 0.26
FAM239A-203ENST00000456563 DAZLQ92904 295 aaKnown RBP16.7■□□□□ 0.26
FAM239A-203ENST00000456563 COQ8BQ96D53 544 aa16.7■□□□□ 0.26
FAM239A-203ENST00000456563 PRPF18Q99633 342 aaKnown RBP16.7■□□□□ 0.26
FAM239A-203ENST00000456563 PRORYQ9H606 182 aa16.7■□□□□ 0.26
FAM239A-203ENST00000456563 ZNF160Q9HCG1 818 aa16.7■□□□□ 0.26
FAM239A-203ENST00000456563 SDR39U1Q9NRG7 319 aaPredicted RBP16.7■□□□□ 0.26
FAM239A-203ENST00000456563 PPIEQ9UNP9 301 aaKnown RBP16.7■□□□□ 0.26
FAM239A-203ENST00000456563 ENTPD4Q9Y227 616 aa16.7■□□□□ 0.26
FAM239A-203ENST00000456563 KCNMB2Q9Y691 235 aa16.7■□□□□ 0.26
FAM239A-203ENST00000456563 ACACBO00763 2458 aa16.7■□□□□ 0.26
FAM239A-203ENST00000456563 DMXL2Q8TDJ6 3036 aa16.7■□□□□ 0.26
FAM239A-203ENST00000456563 ARGFXA6NJG6 315 aa16.69■□□□□ 0.26
FAM239A-203ENST00000456563 MYO1GB0I1T2 1018 aa16.69■□□□□ 0.26
FAM239A-203ENST00000456563 ATP1B1P05026 303 aa16.69■□□□□ 0.26
FAM239A-203ENST00000456563 ICAM2P13598 275 aa16.69■□□□□ 0.26
FAM239A-203ENST00000456563 TNNI3P19429 210 aa16.69■□□□□ 0.26
FAM239A-203ENST00000456563 ARFIP2P53365 341 aa16.69■□□□□ 0.26
FAM239A-203ENST00000456563 SLC26A5P58743 744 aa16.69■□□□□ 0.26
FAM239A-203ENST00000456563 DUSP2Q05923 314 aa16.69■□□□□ 0.26
FAM239A-203ENST00000456563 AIMP2Q13155 320 aaKnown RBP16.69■□□□□ 0.26
FAM239A-203ENST00000456563 RPS6KA2Q15349 733 aa16.69■□□□□ 0.26
FAM239A-203ENST00000456563 EXT1Q16394 746 aa16.69■□□□□ 0.26
FAM239A-203ENST00000456563 SPRED3Q2MJR0 410 aa16.69■□□□□ 0.26
FAM239A-203ENST00000456563 ZNF385BQ569K4 471 aa16.69■□□□□ 0.26
FAM239A-203ENST00000456563 METTL21CQ5VZV1 264 aa16.69■□□□□ 0.26
FAM239A-203ENST00000456563 PLAG1Q6DJT9 500 aa16.69■□□□□ 0.26
FAM239A-203ENST00000456563 ANKRD26P1Q6NSI1 321 aa16.69■□□□□ 0.26
FAM239A-203ENST00000456563 FAM180BQ6P0A1 224 aa16.69■□□□□ 0.26
FAM239A-203ENST00000456563 CAMKMTQ7Z624 323 aa16.69■□□□□ 0.26
FAM239A-203ENST00000456563 LRRC25Q8N386 305 aaPredicted RBP16.69■□□□□ 0.26
FAM239A-203ENST00000456563 NATD1Q8N6N6 113 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms