RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 DSPPQ9NZW4 1301 aa14.27□□□□□ -0.12
LDLR-202ENST00000455727 MAN2B1O00754 1011 aa14.27□□□□□ -0.13
LDLR-202ENST00000455727 LATO43561 262 aa14.27□□□□□ -0.13
LDLR-202ENST00000455727 KDM1AO60341 852 aa14.27□□□□□ -0.13
LDLR-202ENST00000455727 RNGTTO60942 597 aaKnown RBP14.27□□□□□ -0.13
LDLR-202ENST00000455727 SERPIND1P05546 499 aa14.27□□□□□ -0.13
LDLR-202ENST00000455727 C21orf33P30042 268 aaPredicted RBP14.27□□□□□ -0.13
LDLR-202ENST00000455727 TIE1P35590 1138 aa14.27□□□□□ -0.13
LDLR-202ENST00000455727 OPRL1P41146 370 aa14.27□□□□□ -0.13
LDLR-202ENST00000455727 BCL6P41182 706 aa14.27□□□□□ -0.13
LDLR-202ENST00000455727 GSSP48637 474 aa14.27□□□□□ -0.13
LDLR-202ENST00000455727 CRISP1P54107 249 aa14.27□□□□□ -0.13
LDLR-202ENST00000455727 VBP1P61758 197 aa14.27□□□□□ -0.13
LDLR-202ENST00000455727 HYAL2Q12891 473 aa14.27□□□□□ -0.13
LDLR-202ENST00000455727 PARM1Q6UWI2 310 aa14.27□□□□□ -0.13
LDLR-202ENST00000455727 OR14C36Q8NHC7 312 aa14.27□□□□□ -0.13
LDLR-202ENST00000455727 NDNFQ8TB73 568 aa14.27□□□□□ -0.13
LDLR-202ENST00000455727 GANCQ8TET4 914 aa14.27□□□□□ -0.13
LDLR-202ENST00000455727 FGF14Q92915 247 aa14.27□□□□□ -0.13
LDLR-202ENST00000455727 GTPBP3Q969Y2 492 aaKnown RBP14.27□□□□□ -0.13
LDLR-202ENST00000455727 MS4A6EQ96DS6 147 aa14.27□□□□□ -0.13
LDLR-202ENST00000455727 TREX2Q9BQ50 279 aaPredicted RBP14.27□□□□□ -0.13
LDLR-202ENST00000455727 MKRN2Q9H000 416 aaKnown RBP14.27□□□□□ -0.13
LDLR-202ENST00000455727 ACAD8Q9UKU7 415 aa14.27□□□□□ -0.13
LDLR-202ENST00000455727 PLEKHM1Q9Y4G2 1056 aa14.27□□□□□ -0.13
LDLR-202ENST00000455727 SNX11Q9Y5W9 270 aa14.27□□□□□ -0.13
LDLR-202ENST00000455727 HEBP2Q9Y5Z4 205 aa14.27□□□□□ -0.13
LDLR-202ENST00000455727 GPC6Q9Y625 555 aaPredicted RBP14.27□□□□□ -0.13
LDLR-202ENST00000455727 CDH23Q9H251 3354 aa14.27□□□□□ -0.13
LDLR-202ENST00000455727 ANHXE9PGG2 379 aa14.26□□□□□ -0.13
LDLR-202ENST00000455727 LAMP2P13473 410 aa14.26□□□□□ -0.13
LDLR-202ENST00000455727 POU2F1P14859 743 aa14.26□□□□□ -0.13
LDLR-202ENST00000455727 FUT4P22083 530 aa14.26□□□□□ -0.13
LDLR-202ENST00000455727 CTSKP43235 329 aa14.26□□□□□ -0.13
LDLR-202ENST00000455727 TSFMP43897 325 aaKnown RBP14.26□□□□□ -0.13
LDLR-202ENST00000455727 LBX1P52954 281 aa14.26□□□□□ -0.13
LDLR-202ENST00000455727 SMIM11AP58511 58 aa14.26□□□□□ -0.13
LDLR-202ENST00000455727 TP53BP2Q13625 1128 aa14.26□□□□□ -0.13
LDLR-202ENST00000455727 MDC1Q14676 2089 aaKnown RBP14.26□□□□□ -0.13
LDLR-202ENST00000455727 RPE65Q16518 533 aa14.26□□□□□ -0.13
LDLR-202ENST00000455727 FBXO43Q4G163 708 aa14.26□□□□□ -0.13
LDLR-202ENST00000455727 MRM1Q6IN84 353 aaKnown RBP14.26□□□□□ -0.13
LDLR-202ENST00000455727 KIAA1211LQ6NV74 962 aa14.26□□□□□ -0.13
LDLR-202ENST00000455727 ANKRD54Q6NXT1 300 aa14.26□□□□□ -0.13
LDLR-202ENST00000455727 SLC44A2Q8IWA5 706 aaPredicted RBP14.26□□□□□ -0.13
LDLR-202ENST00000455727 OR2L3Q8NG85 312 aa14.26□□□□□ -0.13
LDLR-202ENST00000455727 UCN3Q969E3 161 aa14.26□□□□□ -0.13
LDLR-202ENST00000455727 SLC35G5Q96KT7 338 aa14.26□□□□□ -0.13
LDLR-202ENST00000455727 COL21A1Q96P44 957 aa14.26□□□□□ -0.13
LDLR-202ENST00000455727 WDR12Q9GZL7 423 aaKnown RBP14.26□□□□□ -0.13
LDLR-202ENST00000455727 KLHL31Q9H511 634 aa14.26□□□□□ -0.13
LDLR-202ENST00000455727 SLC6A20Q9NP91 592 aa14.26□□□□□ -0.13
LDLR-202ENST00000455727 PRDM7Q9NQW5 492 aa14.26□□□□□ -0.13
LDLR-202ENST00000455727 FBXO8Q9NRD0 319 aa14.26□□□□□ -0.13
LDLR-202ENST00000455727 RHCGQ9UBD6 479 aa14.26□□□□□ -0.13
LDLR-202ENST00000455727 PNMA8BQ9ULN7 279 aaPredicted RBP14.26□□□□□ -0.13
LDLR-202ENST00000455727 DUSP12Q9UNI6 340 aa14.26□□□□□ -0.13
LDLR-202ENST00000455727 MGAT4BQ9UQ53 548 aa14.26□□□□□ -0.13
LDLR-202ENST00000455727 GPSM3Q9Y4H4 160 aa14.26□□□□□ -0.13
LDLR-202ENST00000455727 ASB4Q9Y574 426 aa14.26□□□□□ -0.13
LDLR-202ENST00000455727 SNRNP200O75643 2136 aaKnown RBP14.26□□□□□ -0.13
LDLR-202ENST00000455727 ATG2BQ96BY7 2078 aa14.26□□□□□ -0.13
LDLR-202ENST00000455727 PDZK1P1A8MUH7 402 aa14.26□□□□□ -0.13
LDLR-202ENST00000455727 PPM1DO15297 605 aa14.26□□□□□ -0.13
LDLR-202ENST00000455727 SLC28A2O43868 658 aa14.26□□□□□ -0.13
LDLR-202ENST00000455727 HOXC4P09017 264 aaPredicted RBP14.26□□□□□ -0.13
LDLR-202ENST00000455727 HIST1H1TP22492 207 aaPredicted RBP14.26□□□□□ -0.13
LDLR-202ENST00000455727 CHMP24386 653 aa14.26□□□□□ -0.13
LDLR-202ENST00000455727 NTSR1P30989 418 aa14.26□□□□□ -0.13
LDLR-202ENST00000455727 NTSP30990 170 aa14.26□□□□□ -0.13
LDLR-202ENST00000455727 ANXA11P50995 505 aaKnown RBP14.26□□□□□ -0.13
LDLR-202ENST00000455727 SLAMF1Q13291 335 aa14.26□□□□□ -0.13
LDLR-202ENST00000455727 NR1D2Q14995 579 aa14.26□□□□□ -0.13
LDLR-202ENST00000455727 ABHD17CQ6PCB6 329 aa14.26□□□□□ -0.13
LDLR-202ENST00000455727 BHLHB9Q6PI77 547 aa14.26□□□□□ -0.13
LDLR-202ENST00000455727 ZBTB46Q86UZ6 589 aa14.26□□□□□ -0.13
LDLR-202ENST00000455727 KRT73Q86Y46 540 aa14.26□□□□□ -0.13
LDLR-202ENST00000455727 SRFBP1Q8NEF9 429 aaKnown RBP14.26□□□□□ -0.13
LDLR-202ENST00000455727 OR2L5Q8NG80 312 aa14.26□□□□□ -0.13
LDLR-202ENST00000455727 SFXN5Q8TD22 340 aa14.26□□□□□ -0.13
LDLR-202ENST00000455727 ASB12Q8WXK4 309 aa14.26□□□□□ -0.13
LDLR-202ENST00000455727 CRELD1Q96HD1 420 aa14.26□□□□□ -0.13
LDLR-202ENST00000455727 GABRG3Q99928 467 aa14.26□□□□□ -0.13
LDLR-202ENST00000455727 OR51I1Q9H343 314 aa14.26□□□□□ -0.13
LDLR-202ENST00000455727 KIR3DX1Q9H7L2 352 aa14.26□□□□□ -0.13
LDLR-202ENST00000455727 BCL2L10Q9HD36 194 aa14.26□□□□□ -0.13
LDLR-202ENST00000455727 AKIP1Q9NQ31 210 aa14.26□□□□□ -0.13
LDLR-202ENST00000455727 CNOT2Q9NZN8 540 aaKnown RBP14.26□□□□□ -0.13
LDLR-202ENST00000455727 SEC14L3Q9UDX4 400 aa14.26□□□□□ -0.13
LDLR-202ENST00000455727 ERGIC3Q9Y282 383 aa14.26□□□□□ -0.13
LDLR-202ENST00000455727 A0A0G2JN53 185 aa14.25□□□□□ -0.13
LDLR-202ENST00000455727 TRBV4-1A0A0J9YWV2 114 aa14.25□□□□□ -0.13
LDLR-202ENST00000455727 PRAMEF27A3QJZ7 478 aa14.25□□□□□ -0.13
LDLR-202ENST00000455727 OR52A4PA6NMU1 304 aa14.25□□□□□ -0.13
LDLR-202ENST00000455727 J3QRK9 145 aa14.25□□□□□ -0.13
LDLR-202ENST00000455727 M0R082 166 aa14.25□□□□□ -0.13
LDLR-202ENST00000455727 FAAHO00519 579 aa14.25□□□□□ -0.13
LDLR-202ENST00000455727 CBFA2T3O75081 653 aa14.25□□□□□ -0.13
LDLR-202ENST00000455727 SEMA7AO75326 666 aa14.25□□□□□ -0.13
LDLR-202ENST00000455727 DNTTP04053 509 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms