RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 GPR85P60893 370 aa19.68■□□□□ 0.74
HMGB3-205ENST00000455596 SGO1Q5FBB7 561 aa19.68■□□□□ 0.74
HMGB3-205ENST00000455596 RNFT1Q5M7Z0 435 aa19.68■□□□□ 0.74
HMGB3-205ENST00000455596 ZNF678Q5SXM1 525 aa19.68■□□□□ 0.74
HMGB3-205ENST00000455596 OR52E8Q6IFG1 317 aa19.68■□□□□ 0.74
HMGB3-205ENST00000455596 DGAT2L6Q6ZPD8 337 aa19.68■□□□□ 0.74
HMGB3-205ENST00000455596 SPPL2CQ8IUH8 684 aa19.68■□□□□ 0.74
HMGB3-205ENST00000455596 NUBPLQ8TB37 319 aa19.68■□□□□ 0.74
HMGB3-205ENST00000455596 TRPC4APQ8TEL6 797 aa19.68■□□□□ 0.74
HMGB3-205ENST00000455596 SELENOMQ8WWX9 145 aa19.68■□□□□ 0.74
HMGB3-205ENST00000455596 FBXL20Q96IG2 436 aa19.68■□□□□ 0.74
HMGB3-205ENST00000455596 MRPL1Q9BYD6 325 aaKnown RBP19.68■□□□□ 0.74
HMGB3-205ENST00000455596 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.68■□□□□ 0.74
HMGB3-205ENST00000455596 SLC12A4Q9UP95 1085 aa19.68■□□□□ 0.74
HMGB3-205ENST00000455596 ZNF835Q9Y2P0 537 aa19.68■□□□□ 0.74
HMGB3-205ENST00000455596 UTP20O75691 2785 aaKnown RBP19.68■□□□□ 0.74
HMGB3-205ENST00000455596 DOPEY1Q5JWR5 2465 aa19.67■□□□□ 0.74
HMGB3-205ENST00000455596 WASHC1A8K0Z3 465 aa19.67■□□□□ 0.74
HMGB3-205ENST00000455596 TFECO14948 347 aaPredicted RBP19.67■□□□□ 0.74
HMGB3-205ENST00000455596 DLX3O60479 287 aa19.67■□□□□ 0.74
HMGB3-205ENST00000455596 OR4F21O95013 312 aa19.67■□□□□ 0.74
HMGB3-205ENST00000455596 PDYNP01213 254 aa19.67■□□□□ 0.74
HMGB3-205ENST00000455596 IGKV3-11P04433 115 aa19.67■□□□□ 0.74
HMGB3-205ENST00000455596 KLK1P06870 262 aa19.67■□□□□ 0.74
HMGB3-205ENST00000455596 PYGBP11216 843 aa19.67■□□□□ 0.74
HMGB3-205ENST00000455596 ATP5F1P24539 256 aaPredicted RBP19.67■□□□□ 0.74
HMGB3-205ENST00000455596 COL8A1P27658 744 aa19.67■□□□□ 0.74
HMGB3-205ENST00000455596 SPRED3Q2MJR0 410 aa19.67■□□□□ 0.74
HMGB3-205ENST00000455596 UNC50Q53HI1 259 aa19.67■□□□□ 0.74
HMGB3-205ENST00000455596 CCNYL2Q5T2Q4 361 aa19.67■□□□□ 0.74
HMGB3-205ENST00000455596 MTFR2Q6P444 385 aa19.67■□□□□ 0.74
HMGB3-205ENST00000455596 OPN5Q6U736 354 aa19.67■□□□□ 0.74
HMGB3-205ENST00000455596 Q6ZPB1 254 aaPredicted RBP19.67■□□□□ 0.74
HMGB3-205ENST00000455596 SLC22A9Q8IVM8 553 aa19.67■□□□□ 0.74
HMGB3-205ENST00000455596 METTL4Q8N3J2 472 aa19.67■□□□□ 0.74
HMGB3-205ENST00000455596 C16orf52Q8NHV5 167 aa19.67■□□□□ 0.74
HMGB3-205ENST00000455596 MZB1Q8WU39 189 aa19.67■□□□□ 0.74
HMGB3-205ENST00000455596 CNPPD1Q9BV87 410 aa19.67■□□□□ 0.74
HMGB3-205ENST00000455596 BRF2Q9HAW0 419 aa19.67■□□□□ 0.74
HMGB3-205ENST00000455596 FARSBQ9NSD9 589 aaKnown RBP19.67■□□□□ 0.74
HMGB3-205ENST00000455596 DCDC2Q9UHG0 476 aa19.67■□□□□ 0.74
HMGB3-205ENST00000455596 ABOP16442 354 aa19.66■□□□□ 0.74
HMGB3-205ENST00000455596 IMPDH1P20839 514 aa19.66■□□□□ 0.74
HMGB3-205ENST00000455596 PIK3R1P27986 724 aa19.66■□□□□ 0.74
HMGB3-205ENST00000455596 GALNSP34059 522 aa19.66■□□□□ 0.74
HMGB3-205ENST00000455596 RFC3P40938 356 aa19.66■□□□□ 0.74
HMGB3-205ENST00000455596 ERVK-8P63133 956 aa19.66■□□□□ 0.74
HMGB3-205ENST00000455596 RASA2Q15283 850 aa19.66■□□□□ 0.74
HMGB3-205ENST00000455596 C3AR1Q16581 482 aa19.66■□□□□ 0.74
HMGB3-205ENST00000455596 MPEG1Q2M385 716 aa19.66■□□□□ 0.74
HMGB3-205ENST00000455596 BNC2Q6ZN30 1099 aaPredicted RBP19.66■□□□□ 0.74
HMGB3-205ENST00000455596 RTL4Q6ZR62 310 aa19.66■□□□□ 0.74
HMGB3-205ENST00000455596 C9orf40Q8IXQ3 194 aa19.66■□□□□ 0.74
HMGB3-205ENST00000455596 ZFP62Q8NB50 900 aaPredicted RBP19.66■□□□□ 0.74
HMGB3-205ENST00000455596 UBLCP1Q8WVY7 318 aaPredicted RBP19.66■□□□□ 0.74
HMGB3-205ENST00000455596 RIT1Q92963 219 aa19.66■□□□□ 0.74
HMGB3-205ENST00000455596 UCN3Q969E3 161 aa19.66■□□□□ 0.74
HMGB3-205ENST00000455596 CCDC120Q96HB5 630 aa19.66■□□□□ 0.74
HMGB3-205ENST00000455596 TMEM237Q96Q45 408 aa19.66■□□□□ 0.74
HMGB3-205ENST00000455596 L2HGDHQ9H9P8 463 aa19.66■□□□□ 0.74
HMGB3-205ENST00000455596 NMRK1Q9NWW6 199 aa19.66■□□□□ 0.74
HMGB3-205ENST00000455596 TEX10Q9NXF1 929 aaPredicted RBP19.66■□□□□ 0.74
HMGB3-205ENST00000455596 TINAGQ9UJW2 476 aa19.66■□□□□ 0.74
HMGB3-205ENST00000455596 ZNF225Q9UK10 706 aa19.66■□□□□ 0.74
HMGB3-205ENST00000455596 ERVK-19Q9WJR5 959 aa19.66■□□□□ 0.74
HMGB3-205ENST00000455596 NCOA6Q14686 2063 aaPredicted RBP19.66■□□□□ 0.74
HMGB3-205ENST00000455596 HRKO00198 91 aa19.65■□□□□ 0.74
HMGB3-205ENST00000455596 PGRMC2O15173 223 aa19.65■□□□□ 0.74
HMGB3-205ENST00000455596 GUCY1B2O75343 617 aa19.65■□□□□ 0.74
HMGB3-205ENST00000455596 SLC35E2P0CK97 266 aa19.65■□□□□ 0.74
HMGB3-205ENST00000455596 ESRRAP11474 423 aaPredicted RBP19.65■□□□□ 0.74
HMGB3-205ENST00000455596 MAPK12P53778 367 aa19.65■□□□□ 0.74
HMGB3-205ENST00000455596 HSF1Q00613 529 aa19.65■□□□□ 0.74
HMGB3-205ENST00000455596 ASPHQ12797 758 aa19.65■□□□□ 0.74
HMGB3-205ENST00000455596 ZNF267Q14586 743 aaPredicted RBP19.65■□□□□ 0.74
HMGB3-205ENST00000455596 ZNF750Q32MQ0 723 aa19.65■□□□□ 0.74
HMGB3-205ENST00000455596 PIGGQ5H8A4 983 aa19.65■□□□□ 0.74
HMGB3-205ENST00000455596 NDUFAF5Q5TEU4 345 aa19.65■□□□□ 0.74
HMGB3-205ENST00000455596 GOLM1Q8NBJ4 401 aa19.65■□□□□ 0.74
HMGB3-205ENST00000455596 SLC22A8Q8TCC7 542 aa19.65■□□□□ 0.74
HMGB3-205ENST00000455596 DOK4Q8TEW6 326 aa19.65■□□□□ 0.74
HMGB3-205ENST00000455596 ZNF382Q96SR6 550 aa19.65■□□□□ 0.74
HMGB3-205ENST00000455596 STK38LQ9Y2H1 464 aa19.65■□□□□ 0.74
HMGB3-205ENST00000455596 EXPH5Q8NEV8 1989 aa19.64■□□□□ 0.74
HMGB3-205ENST00000455596 HS6ST1O60243 411 aa19.64■□□□□ 0.73
HMGB3-205ENST00000455596 GLRA3O75311 464 aa19.64■□□□□ 0.73
HMGB3-205ENST00000455596 KRT6AP02538 564 aa19.64■□□□□ 0.73
HMGB3-205ENST00000455596 KRT6BP04259 564 aa19.64■□□□□ 0.73
HMGB3-205ENST00000455596 TNFRSF8P28908 595 aa19.64■□□□□ 0.73
HMGB3-205ENST00000455596 KRT6CP48668 564 aa19.64■□□□□ 0.73
HMGB3-205ENST00000455596 PRKAA2P54646 552 aa19.64■□□□□ 0.73
HMGB3-205ENST00000455596 RNF111Q6ZNA4 994 aa19.64■□□□□ 0.73
HMGB3-205ENST00000455596 GPRIN3Q6ZVF9 776 aa19.64■□□□□ 0.73
HMGB3-205ENST00000455596 SLC29A4Q7RTT9 530 aa19.64■□□□□ 0.73
HMGB3-205ENST00000455596 COMMD6Q7Z4G1 85 aa19.64■□□□□ 0.73
HMGB3-205ENST00000455596 CDYL2Q8N8U2 506 aa19.64■□□□□ 0.73
HMGB3-205ENST00000455596 OR2M7Q8NG81 312 aa19.64■□□□□ 0.73
HMGB3-205ENST00000455596 OR4K14Q8NGD5 310 aa19.64■□□□□ 0.73
HMGB3-205ENST00000455596 L3HYPDHQ96EM0 354 aa19.64■□□□□ 0.73
HMGB3-205ENST00000455596 SGCZQ96LD1 299 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms