RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 LRMDAQ9H2I8 198 aa10.32□□□□□ -0.76
SCN9A-205ENST00000454569 GLIPR2Q9H4G4 154 aa10.32□□□□□ -0.76
SCN9A-205ENST00000454569 IKZF5Q9H5V7 419 aa10.32□□□□□ -0.76
SCN9A-205ENST00000454569 ANKRA2Q9H9E1 313 aa10.32□□□□□ -0.76
SCN9A-205ENST00000454569 SLC35C2Q9NQQ7 365 aa10.32□□□□□ -0.76
SCN9A-205ENST00000454569 NECTIN3Q9NQS3 549 aa10.32□□□□□ -0.76
SCN9A-205ENST00000454569 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.32□□□□□ -0.761e-7■■■□□ 18.8
SCN9A-205ENST00000454569 TMEM45AQ9NWC5 275 aa10.32□□□□□ -0.76
SCN9A-205ENST00000454569 TAS2R7Q9NYW3 318 aa10.32□□□□□ -0.76
SCN9A-205ENST00000454569 VAPAQ9P0L0 249 aa10.32□□□□□ -0.76
SCN9A-205ENST00000454569 TRPC4Q9UBN4 977 aa10.32□□□□□ -0.76
SCN9A-205ENST00000454569 PHF11Q9UIL8 331 aa10.32□□□□□ -0.76
SCN9A-205ENST00000454569 WBP11Q9Y2W2 641 aaKnown RBP10.32□□□□□ -0.76
SCN9A-205ENST00000454569 PCSK5Q92824 1860 aa10.32□□□□□ -0.76
SCN9A-205ENST00000454569 TRBV5-3A0A0A0MS03 114 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 CFAP73A6NFT4 308 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 MYO1GB0I1T2 1018 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 H0YHG0 523 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 MEN1O00255 615 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 ANGPT2O15123 496 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 CFLARO15519 480 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 NME6O75414 186 aaPredicted RBP10.31□□□□□ -0.76
SCN9A-205ENST00000454569 BMP10O95393 424 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 ABCB1P08183 1280 aaPredicted RBP10.31□□□□□ -0.76
SCN9A-205ENST00000454569 RNH1P13489 461 aaKnown RBP10.31□□□□□ -0.76
SCN9A-205ENST00000454569 FBLP22087 321 aaKnown RBP10.31□□□□□ -0.76
SCN9A-205ENST00000454569 PTPN4P29074 926 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 CDK9P50750 372 aaKnown RBP10.31□□□□□ -0.76
SCN9A-205ENST00000454569 HBA1P69905 142 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 MXRA7P84157 204 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 STX5Q13190 355 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 MAPKAPK3Q16644 382 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 MMEL1Q495T6 779 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 ARHGAP40Q5TG30 622 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 ASRGL1Q7L266 308 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 R3HCC1LQ7Z5L2 792 aaKnown RBP10.31□□□□□ -0.76
SCN9A-205ENST00000454569 FAM9CQ8IZT9 166 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 DPP10Q8N608 796 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 GALNT6Q8NCL4 622 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 ADCY4Q8NFM4 1077 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 TSPEARQ8WU66 669 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 ADAMTS14Q8WXS8 1223 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 PPWD1Q96BP3 646 aaKnown RBP10.31□□□□□ -0.76
SCN9A-205ENST00000454569 MVB12AQ96EY5 273 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 CLPTM1LQ96KA5 538 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 FAIM2Q9BWQ8 316 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 ULBP3Q9BZM4 244 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 BHLHE41Q9C0J9 482 aaPredicted RBP10.31□□□□□ -0.76
SCN9A-205ENST00000454569 SLC7A5P2Q9GIP4 190 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 EHD3Q9NZN3 535 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 LEF1Q9UJU2 399 aaPredicted RBP10.31□□□□□ -0.76
SCN9A-205ENST00000454569 PRDM4Q9UKN5 801 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 CDV3Q9UKY7 258 aaKnown RBP10.31□□□□□ -0.76
SCN9A-205ENST00000454569 SRPK3Q9UPE1 567 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 USP22Q9UPT9 525 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 MAN2B2Q9Y2E5 1009 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 MAP4K5Q9Y4K4 846 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 PCDHB14Q9Y5E9 798 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 PCDHGA7Q9Y5G6 932 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 PRSS51A0A1B0GVH4 220 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 A0A1W2PRB8 838 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 GUCY1B2O75343 617 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 ONECUT2O95948 504 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 RECKO95980 971 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 FHP07954 510 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 JMJD7P0C870 316 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 BUD31P41223 144 aaPredicted RBP10.31□□□□□ -0.76
SCN9A-205ENST00000454569 GSTM5P46439 218 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 XKP51811 444 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 MNAT1P51948 309 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 CASP9P55211 416 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 ABHD18Q0P651 414 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 GAB1Q13480 694 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 NFYCQ13952 458 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 MAPRE2Q15555 327 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 CEBPEQ15744 281 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 DPY19L1Q2PZI1 675 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 NKAIN1Q4KMZ8 207 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 C6orf10Q5SRN2 563 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 YOD1Q5VVQ6 348 aaPredicted RBP10.31□□□□□ -0.76
SCN9A-205ENST00000454569 PRMT9Q6P2P2 845 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 CEACAM20Q6UY09 585 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 WDR36Q8NI36 951 aaKnown RBP10.31□□□□□ -0.76
SCN9A-205ENST00000454569 TSLPQ969D9 159 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 UTP4Q969X6 686 aaKnown RBP10.31□□□□□ -0.76
SCN9A-205ENST00000454569 TBC1D20Q96BZ9 403 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 LRRC58Q96CX6 371 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 CCDC115Q96NT0 180 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 AMDHD1Q96NU7 426 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 RAB3IPQ96QF0 476 aaPredicted RBP10.31□□□□□ -0.76
SCN9A-205ENST00000454569 TAAR9Q96RI9 348 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 GPATCH1Q9BRR8 931 aaKnown RBP10.31□□□□□ -0.76
SCN9A-205ENST00000454569 CADM1Q9BY67 442 aaKnown RBP10.31□□□□□ -0.76
SCN9A-205ENST00000454569 CHST8Q9H2A9 424 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 CXorf36Q9H7Y0 433 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 EFCAB1Q9HAE3 211 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 SIRT3Q9NTG7 399 aaPredicted RBP10.31□□□□□ -0.76
SCN9A-205ENST00000454569 FAM120CQ9NX05 1096 aaKnown RBP10.31□□□□□ -0.76
SCN9A-205ENST00000454569 MS4A12Q9NXJ0 267 aa10.31□□□□□ -0.76
SCN9A-205ENST00000454569 ACSL6Q9UKU0 697 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms