RNA–Protein interactions for RNA: ENST00000454555.2

LINC00343-203, long intergenic non-protein coding RNA 343, humanhuman

TSL 2 BASIC

Gene LINC00343, Length 1,765 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-203ENST00000454555 TBC1D3IA0A087WXS9 549 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 TBC1D3EA0A087X179 549 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 TBC1D3KA0A087X1G2 549 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 FAM172BPA6NC97 362 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 TBC1D3FA6NER0 549 aaPredicted RBP12.64□□□□□ -0.39
LINC00343-203ENST00000454555 A8MX80 341 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 TMEM229AB2RXF0 380 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 TBC1D3LB9A6J9 549 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 TNFRSF21O75509 655 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 PCDH8O95206 1070 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 SEMA4FO95754 770 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 VIPP01282 170 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 CATP04040 527 aaKnown RBP12.64□□□□□ -0.39
LINC00343-203ENST00000454555 TBC1D3HP0C7X1 549 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 ALOX12P18054 663 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 RHCEP18577 417 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 ENDOUP21128 410 aaKnown RBP12.64□□□□□ -0.39
LINC00343-203ENST00000454555 ITPKAP23677 461 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 LIMS1P48059 325 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 IDH2P48735 452 aaKnown RBP12.64□□□□□ -0.39
LINC00343-203ENST00000454555 FNTBP49356 437 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 PRIM2P49643 509 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 RPS21P63220 83 aaKnown RBP12.64□□□□□ -0.39
LINC00343-203ENST00000454555 DOC2AQ14183 400 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 C1QTNF12Q5T7M4 302 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 RNLSQ5VYX0 342 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 TBC1D3GQ6DHY5 549 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 DESI1Q6ICB0 168 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 TBC1D3CQ6IPX1 549 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 CCBE1Q6UXH8 406 aaPredicted RBP12.64□□□□□ -0.39
LINC00343-203ENST00000454555 SLC36A4Q6YBV0 504 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 TBC1D3Q8IZP1 549 aaPredicted RBP12.64□□□□□ -0.39
LINC00343-203ENST00000454555 OR4A15Q8NGL6 344 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 CXorf40AQ8TE69 158 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 ASB12Q8WXK4 309 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 ZNF486Q96H40 463 aaPredicted RBP12.64□□□□□ -0.39
LINC00343-203ENST00000454555 SPACA7Q96KW9 195 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 CEP19Q96LK0 163 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 MYOCQ99972 504 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 PCED1AQ9H1Q7 454 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 REEP4Q9H6H4 257 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 CCDC177Q9NQR7 707 aaPredicted RBP12.64□□□□□ -0.39
LINC00343-203ENST00000454555 ANGPT4Q9Y264 503 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 FOXE1O00358 373 aaPredicted RBP12.63□□□□□ -0.39
LINC00343-203ENST00000454555 ZW10O43264 779 aa12.63□□□□□ -0.39
LINC00343-203ENST00000454555 MMP20O60882 483 aa12.63□□□□□ -0.39
LINC00343-203ENST00000454555 RNGTTO60942 597 aaKnown RBP12.63□□□□□ -0.39
LINC00343-203ENST00000454555 UGT2B17O75795 530 aa12.63□□□□□ -0.39
LINC00343-203ENST00000454555 CCNB2O95067 398 aa12.63□□□□□ -0.39
LINC00343-203ENST00000454555 KRT75O95678 551 aa12.63□□□□□ -0.39
LINC00343-203ENST00000454555 STSP08842 583 aa12.63□□□□□ -0.39
LINC00343-203ENST00000454555 ELFN1P0C7U0 828 aa12.63□□□□□ -0.39
LINC00343-203ENST00000454555 SLC15A1P46059 708 aa12.63□□□□□ -0.39
LINC00343-203ENST00000454555 ZNF763Q0D2J5 394 aa12.63□□□□□ -0.39
LINC00343-203ENST00000454555 SCARB2Q14108 478 aa12.63□□□□□ -0.39
LINC00343-203ENST00000454555 AGERQ15109 404 aa12.63□□□□□ -0.39
LINC00343-203ENST00000454555 TSEN54Q7Z6J9 526 aaKnown RBP12.63□□□□□ -0.39
LINC00343-203ENST00000454555 TECPR1Q7Z6L1 1165 aa12.63□□□□□ -0.39
LINC00343-203ENST00000454555 HEATR4Q86WZ0 1026 aa12.63□□□□□ -0.39
LINC00343-203ENST00000454555 RNF130Q86XS8 419 aa12.63□□□□□ -0.39
LINC00343-203ENST00000454555 SYTL1Q8IYJ3 562 aa12.63□□□□□ -0.39
LINC00343-203ENST00000454555 NATD1Q8N6N6 113 aa12.63□□□□□ -0.39
LINC00343-203ENST00000454555 FRMD1Q8N878 549 aa12.63□□□□□ -0.39
LINC00343-203ENST00000454555 CADM4Q8NFZ8 388 aa12.63□□□□□ -0.39
LINC00343-203ENST00000454555 OR56A3Q8NH54 315 aa12.63□□□□□ -0.39
LINC00343-203ENST00000454555 COQ10AQ96MF6 247 aa12.63□□□□□ -0.39
LINC00343-203ENST00000454555 WDFY2Q96P53 400 aa12.63□□□□□ -0.39
LINC00343-203ENST00000454555 SNX18Q96RF0 628 aa12.63□□□□□ -0.39
LINC00343-203ENST00000454555 SLC30A2Q9BRI3 323 aa12.63□□□□□ -0.39
LINC00343-203ENST00000454555 CCM2Q9BSQ5 444 aa12.63□□□□□ -0.39
LINC00343-203ENST00000454555 WRAP53Q9BUR4 548 aaKnown RBP12.63□□□□□ -0.39
LINC00343-203ENST00000454555 C1QTNF2Q9BXJ5 285 aa12.63□□□□□ -0.39
LINC00343-203ENST00000454555 EHD3Q9NZN3 535 aa12.63□□□□□ -0.39
LINC00343-203ENST00000454555 ZNF232Q9UNY5 417 aa12.63□□□□□ -0.39
LINC00343-203ENST00000454555 LOC100506127A0A0U1RQW1 187 aa12.62□□□□□ -0.39
LINC00343-203ENST00000454555 A0A1W2PQU0 124 aa12.62□□□□□ -0.39
LINC00343-203ENST00000454555 ZAR1LA6NP61 321 aa12.62□□□□□ -0.39
LINC00343-203ENST00000454555 KMOO15229 486 aa12.62□□□□□ -0.39
LINC00343-203ENST00000454555 GALR2O43603 387 aaPredicted RBP12.62□□□□□ -0.39
LINC00343-203ENST00000454555 SGTAO43765 313 aa12.62□□□□□ -0.39
LINC00343-203ENST00000454555 SLITRK5O94991 958 aa12.62□□□□□ -0.39
LINC00343-203ENST00000454555 PTHP01270 115 aa12.62□□□□□ -0.39
LINC00343-203ENST00000454555 C1SP09871 688 aa12.62□□□□□ -0.39
LINC00343-203ENST00000454555 C6P13671 934 aa12.62□□□□□ -0.39
LINC00343-203ENST00000454555 DDX5P17844 614 aaKnown RBP12.62□□□□□ -0.39
LINC00343-203ENST00000454555 CD22P20273 847 aa12.62□□□□□ -0.39
LINC00343-203ENST00000454555 CBLP22681 906 aa12.62□□□□□ -0.39
LINC00343-203ENST00000454555 CHMP24386 653 aa12.62□□□□□ -0.39
LINC00343-203ENST00000454555 CNR2P34972 360 aa12.62□□□□□ -0.39
LINC00343-203ENST00000454555 TGFBR1P36897 503 aa12.62□□□□□ -0.39
LINC00343-203ENST00000454555 XCR1P46094 333 aa12.62□□□□□ -0.39
LINC00343-203ENST00000454555 SEPHS1P49903 392 aa12.62□□□□□ -0.39
LINC00343-203ENST00000454555 CCR5P51681 352 aa12.62□□□□□ -0.39
LINC00343-203ENST00000454555 RAE1P78406 368 aaKnown RBP12.62□□□□□ -0.39
LINC00343-203ENST00000454555 PDE7AQ13946 482 aa12.62□□□□□ -0.39
LINC00343-203ENST00000454555 ANGPT1Q15389 498 aa12.62□□□□□ -0.39
LINC00343-203ENST00000454555 PLAG1Q6DJT9 500 aa12.62□□□□□ -0.39
LINC00343-203ENST00000454555 HSD11B1LQ7Z5J1 315 aa12.62□□□□□ -0.39
LINC00343-203ENST00000454555 GALNT10Q86SR1 603 aa12.62□□□□□ -0.39
LINC00343-203ENST00000454555 C11orf74Q86VG3 221 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms