RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 CCDC159P0C7I6 412 aa11.37□□□□□ -0.59
SMPD4-213ENST00000454468 UQCRC2P22695 453 aa11.37□□□□□ -0.59
SMPD4-213ENST00000454468 PCGF2P35227 344 aa11.37□□□□□ -0.59
SMPD4-213ENST00000454468 ITPRIPL2Q3MIP1 535 aa11.37□□□□□ -0.59
SMPD4-213ENST00000454468 KDM4DQ6B0I6 523 aa11.37□□□□□ -0.59
SMPD4-213ENST00000454468 SMARCD3Q6STE5 483 aa11.37□□□□□ -0.59
SMPD4-213ENST00000454468 IQCHQ86VS3 1027 aa11.37□□□□□ -0.59
SMPD4-213ENST00000454468 TSPYL5Q86VY4 417 aaPredicted RBP11.37□□□□□ -0.59
SMPD4-213ENST00000454468 CROCCP3Q8IVE0 287 aa11.37□□□□□ -0.59
SMPD4-213ENST00000454468 DEPDC4Q8N2C3 294 aa11.37□□□□□ -0.59
SMPD4-213ENST00000454468 CENPSQ8N2Z9 138 aa11.37□□□□□ -0.59
SMPD4-213ENST00000454468 SYNPOQ8N3V7 929 aa11.37□□□□□ -0.59
SMPD4-213ENST00000454468 POC5Q8NA72 575 aa11.37□□□□□ -0.59
SMPD4-213ENST00000454468 C7orf57Q8NEG2 295 aa11.37□□□□□ -0.59
SMPD4-213ENST00000454468 OR52E1Q8NGJ3 308 aa11.37□□□□□ -0.59
SMPD4-213ENST00000454468 PIP5K1AQ99755 562 aa11.37□□□□□ -0.59
SMPD4-213ENST00000454468 OR51E2Q9H255 320 aa11.37□□□□□ -0.59
SMPD4-213ENST00000454468 GIN1Q9NXP7 522 aa11.37□□□□□ -0.59
SMPD4-213ENST00000454468 SPHK1Q9NYA1 384 aa11.37□□□□□ -0.59
SMPD4-213ENST00000454468 ZNF780BQ9Y6R6 833 aa11.37□□□□□ -0.59
SMPD4-213ENST00000454468 GMFGO60234 142 aa11.37□□□□□ -0.59
SMPD4-213ENST00000454468 PVRP15151 417 aa11.37□□□□□ -0.59
SMPD4-213ENST00000454468 RYKP34925 604 aa11.37□□□□□ -0.59
SMPD4-213ENST00000454468 RPS7P62081 194 aaKnown RBP11.37□□□□□ -0.59
SMPD4-213ENST00000454468 PTGES3Q15185 160 aaKnown RBP11.37□□□□□ -0.59
SMPD4-213ENST00000454468 SHHQ15465 462 aa11.37□□□□□ -0.59
SMPD4-213ENST00000454468 GPR68Q15743 365 aa11.37□□□□□ -0.59
SMPD4-213ENST00000454468 PRSS53Q2L4Q9 553 aa11.37□□□□□ -0.59
SMPD4-213ENST00000454468 ZNF829Q3KNS6 432 aaPredicted RBP11.37□□□□□ -0.59
SMPD4-213ENST00000454468 GHDCQ8N2G8 530 aa11.37□□□□□ -0.59
SMPD4-213ENST00000454468 ADAMTS15Q8TE58 950 aa11.37□□□□□ -0.59
SMPD4-213ENST00000454468 ZNF347Q96SE7 839 aa11.37□□□□□ -0.59
SMPD4-213ENST00000454468 CCDC3Q9BQI4 270 aa11.37□□□□□ -0.59
SMPD4-213ENST00000454468 SLAMF7Q9NQ25 335 aa11.37□□□□□ -0.59
SMPD4-213ENST00000454468 STARD5Q9NSY2 213 aa11.37□□□□□ -0.59
SMPD4-213ENST00000454468 ZNF639Q9UID6 485 aa11.37□□□□□ -0.59
SMPD4-213ENST00000454468 EXO1Q9UQ84 846 aaKnown RBP11.37□□□□□ -0.59
SMPD4-213ENST00000454468 FRMPD3Q5JV73 1810 aa11.37□□□□□ -0.59
SMPD4-213ENST00000454468 CDC123O75794 336 aaPredicted RBP11.37□□□□□ -0.59
SMPD4-213ENST00000454468 H1F0P07305 194 aaKnown RBP11.37□□□□□ -0.59
SMPD4-213ENST00000454468 GZMMP51124 257 aa11.37□□□□□ -0.59
SMPD4-213ENST00000454468 MPEG1Q2M385 716 aa11.37□□□□□ -0.59
SMPD4-213ENST00000454468 CRB2Q5IJ48 1285 aa11.37□□□□□ -0.59
SMPD4-213ENST00000454468 ATAD3BQ5T9A4 648 aa11.37□□□□□ -0.59
SMPD4-213ENST00000454468 FAM71E1Q6IPT2 247 aa11.37□□□□□ -0.59
SMPD4-213ENST00000454468 OR52A5Q9H2C5 316 aa11.37□□□□□ -0.59
SMPD4-213ENST00000454468 SFXN1Q9H9B4 322 aa11.37□□□□□ -0.59
SMPD4-213ENST00000454468 CCNB1IP1Q9NPC3 277 aa11.37□□□□□ -0.59
SMPD4-213ENST00000454468 GPATCH2Q9NW75 528 aa11.37□□□□□ -0.59
SMPD4-213ENST00000454468 NCKAP1Q9Y2A7 1128 aa11.37□□□□□ -0.59
SMPD4-213ENST00000454468 SLC9A8Q9Y2E8 581 aa11.37□□□□□ -0.59
SMPD4-213ENST00000454468 RWDD3Q9Y3V2 267 aa11.37□□□□□ -0.59
SMPD4-213ENST00000454468 SZT2Q5T011 3432 aa11.37□□□□□ -0.59
SMPD4-213ENST00000454468 HOXC11O43248 304 aaPredicted RBP11.36□□□□□ -0.59
SMPD4-213ENST00000454468 HMGN2P05204 90 aaKnown RBP11.36□□□□□ -0.59
SMPD4-213ENST00000454468 EIF2B2P49770 351 aaKnown RBP11.36□□□□□ -0.59
SMPD4-213ENST00000454468 XKP51811 444 aa11.36□□□□□ -0.59
SMPD4-213ENST00000454468 MOGQ16653 247 aa11.36□□□□□ -0.59
SMPD4-213ENST00000454468 ADPRMQ3LIE5 342 aa11.36□□□□□ -0.59
SMPD4-213ENST00000454468 ZNF776Q68DI1 518 aaPredicted RBP11.36□□□□□ -0.59
SMPD4-213ENST00000454468 LAIR1Q6GTX8 287 aa11.36□□□□□ -0.59
SMPD4-213ENST00000454468 OR4C11Q6IEV9 310 aa11.36□□□□□ -0.59
SMPD4-213ENST00000454468 GATAD2AQ86YP4 633 aa11.36□□□□□ -0.59
SMPD4-213ENST00000454468 OR9Q1Q8NGQ5 310 aa11.36□□□□□ -0.59
SMPD4-213ENST00000454468 OR5K2Q8NHB8 316 aa11.36□□□□□ -0.59
SMPD4-213ENST00000454468 FNDC8Q8TC99 324 aa11.36□□□□□ -0.59
SMPD4-213ENST00000454468 PATE1Q8WXA2 126 aa11.36□□□□□ -0.59
SMPD4-213ENST00000454468 TM4SF18Q96CE8 201 aa11.36□□□□□ -0.59
SMPD4-213ENST00000454468 POFUT2Q9Y2G5 429 aa11.36□□□□□ -0.59
SMPD4-213ENST00000454468 GMEB1Q9Y692 573 aa11.36□□□□□ -0.59
SMPD4-213ENST00000454468 MYL12BO14950 172 aa11.36□□□□□ -0.59
SMPD4-213ENST00000454468 DDCP20711 480 aa11.36□□□□□ -0.59
SMPD4-213ENST00000454468 GTF2E2P29084 291 aaKnown RBP11.36□□□□□ -0.59
SMPD4-213ENST00000454468 OPRD1P41143 372 aa11.36□□□□□ -0.59
SMPD4-213ENST00000454468 RAB28P51157 221 aa11.36□□□□□ -0.59
SMPD4-213ENST00000454468 EPHA5P54756 1037 aa11.36□□□□□ -0.59
SMPD4-213ENST00000454468 SLC13A2Q13183 592 aa11.36□□□□□ -0.59
SMPD4-213ENST00000454468 LTB4RQ15722 352 aa11.36□□□□□ -0.59
SMPD4-213ENST00000454468 MICAQ29983 383 aa11.36□□□□□ -0.59
SMPD4-213ENST00000454468 IQCCQ4KMZ1 466 aa11.36□□□□□ -0.59
SMPD4-213ENST00000454468 ZC3H14Q6PJT7 736 aaKnown RBP11.36□□□□□ -0.59
SMPD4-213ENST00000454468 ZNF730Q6ZMV8 503 aa11.36□□□□□ -0.59
SMPD4-213ENST00000454468 ZNF675Q8TD23 568 aa11.36□□□□□ -0.59
SMPD4-213ENST00000454468 ACOT13Q9NPJ3 140 aa11.36□□□□□ -0.59
SMPD4-213ENST00000454468 MARK1Q9P0L2 795 aa11.36□□□□□ -0.59
SMPD4-213ENST00000454468 ERGIC3Q9Y282 383 aa11.36□□□□□ -0.59
SMPD4-213ENST00000454468 SLC35F4A4IF30 521 aa11.36□□□□□ -0.59
SMPD4-213ENST00000454468 SPINT1O43278 529 aa11.36□□□□□ -0.59
SMPD4-213ENST00000454468 JRKO75564 520 aa11.36□□□□□ -0.59
SMPD4-213ENST00000454468 SEC14L2O76054 403 aa11.36□□□□□ -0.59
SMPD4-213ENST00000454468 CCNYL3P0C7X3 344 aa11.36□□□□□ -0.59
SMPD4-213ENST00000454468 MRPL19P49406 292 aaKnown RBP11.36□□□□□ -0.59
SMPD4-213ENST00000454468 HYAL2Q12891 473 aa11.36□□□□□ -0.59
SMPD4-213ENST00000454468 GBX1Q14549 363 aa11.36□□□□□ -0.59
SMPD4-213ENST00000454468 IGFN1Q86VF2 1251 aa11.36□□□□□ -0.59
SMPD4-213ENST00000454468 CCDC103Q8IW40 242 aa11.36□□□□□ -0.59
SMPD4-213ENST00000454468 CAMKK1Q8N5S9 505 aa11.36□□□□□ -0.59
SMPD4-213ENST00000454468 ZFP41Q8N8Y5 198 aa11.36□□□□□ -0.59
SMPD4-213ENST00000454468 MYNNQ9NPC7 610 aa11.36□□□□□ -0.59
SMPD4-213ENST00000454468 CD93Q9NPY3 652 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms