RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 CACNA2D2Q9NY47 1150 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 BFARQ9NZS9 450 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 RAPGEFL1Q9UHV5 662 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 DAPK2Q9UIK4 370 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 ATXN7L1Q9ULK2 861 aaPredicted RBP7.41□□□□□ -1.22
BRCC3-208ENST00000453705 PLAGL1Q9UM63 463 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 MN1Q10571 1320 aaPredicted RBP7.4□□□□□ -1.22
BRCC3-208ENST00000453705 HMX2A2RU54 273 aa7.4□□□□□ -1.22
BRCC3-208ENST00000453705 ARHGAP42A6NI28 874 aa7.4□□□□□ -1.22
BRCC3-208ENST00000453705 CD8B2A6NJW9 211 aa7.4□□□□□ -1.22
BRCC3-208ENST00000453705 BANF1O75531 89 aa7.4□□□□□ -1.22
BRCC3-208ENST00000453705 SIX3O95343 332 aaPredicted RBP7.4□□□□□ -1.22
BRCC3-208ENST00000453705 LYL1P12980 280 aa7.4□□□□□ -1.22
BRCC3-208ENST00000453705 ACP5P13686 325 aa7.4□□□□□ -1.22
BRCC3-208ENST00000453705 IFNA8P32881 189 aa7.4□□□□□ -1.22
BRCC3-208ENST00000453705 ID1P41134 155 aa7.4□□□□□ -1.22
BRCC3-208ENST00000453705 ACADVLP49748 655 aa7.4□□□□□ -1.22
BRCC3-208ENST00000453705 GPLD1P80108 840 aa7.4□□□□□ -1.22
BRCC3-208ENST00000453705 ZNF766Q5HY98 468 aa7.4□□□□□ -1.22
BRCC3-208ENST00000453705 NCR3LG1Q68D85 454 aa7.4□□□□□ -1.22
BRCC3-208ENST00000453705 DGAT2L7PQ6IED9 249 aa7.4□□□□□ -1.22
BRCC3-208ENST00000453705 KIAA1841Q6NSI8 718 aa7.4□□□□□ -1.22
BRCC3-208ENST00000453705 CGB2Q6NT52 195 aa7.4□□□□□ -1.22
BRCC3-208ENST00000453705 DEFB128Q7Z7B8 93 aa7.4□□□□□ -1.22
BRCC3-208ENST00000453705 CLEC14AQ86T13 490 aa7.4□□□□□ -1.22
BRCC3-208ENST00000453705 ATPAF2Q8N5M1 289 aa7.4□□□□□ -1.22
BRCC3-208ENST00000453705 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.4□□□□□ -1.22
BRCC3-208ENST00000453705 RHBDD1Q8TEB9 315 aa7.4□□□□□ -1.22
BRCC3-208ENST00000453705 MARVELD3Q96A59 401 aa7.4□□□□□ -1.22
BRCC3-208ENST00000453705 IMP4Q96G21 291 aaKnown RBP7.4□□□□□ -1.22
BRCC3-208ENST00000453705 OPALINQ96PE5 141 aa7.4□□□□□ -1.22
BRCC3-208ENST00000453705 DIRC2Q96SL1 478 aa7.4□□□□□ -1.22
BRCC3-208ENST00000453705 VN1R3Q9BXE9 311 aa7.4□□□□□ -1.22
BRCC3-208ENST00000453705 TINAGL1Q9GZM7 467 aaPredicted RBP7.4□□□□□ -1.22
BRCC3-208ENST00000453705 HDHD2Q9H0R4 259 aa7.4□□□□□ -1.22
BRCC3-208ENST00000453705 PDFQ9HBH1 243 aa7.4□□□□□ -1.22
BRCC3-208ENST00000453705 BEX4Q9NWD9 120 aaPredicted RBP7.4□□□□□ -1.22
BRCC3-208ENST00000453705 CLDND1Q9NY35 253 aa7.4□□□□□ -1.22
BRCC3-208ENST00000453705 KLHL8Q9P2G9 620 aaPredicted RBP7.4□□□□□ -1.22
BRCC3-208ENST00000453705 C3orf18Q9UK00 162 aa7.4□□□□□ -1.22
BRCC3-208ENST00000453705 CDYLQ9Y232 598 aa7.4□□□□□ -1.22
BRCC3-208ENST00000453705 PLLPQ9Y342 182 aa7.4□□□□□ -1.22
BRCC3-208ENST00000453705 MAD1L1Q9Y6D9 718 aa7.4□□□□□ -1.22
BRCC3-208ENST00000453705 VCANP13611 3396 aa7.4□□□□□ -1.22
BRCC3-208ENST00000453705 A0A0J9YVX5 310 aa7.4□□□□□ -1.23
BRCC3-208ENST00000453705 POC1B-GALNT4F8VUJ3 575 aa7.4□□□□□ -1.23
BRCC3-208ENST00000453705 DYRK3O43781 588 aa7.4□□□□□ -1.23
BRCC3-208ENST00000453705 TRIM3O75382 744 aaPredicted RBP7.4□□□□□ -1.23
BRCC3-208ENST00000453705 JRKO75564 520 aa7.4□□□□□ -1.23
BRCC3-208ENST00000453705 ZFPL1O95159 310 aa7.4□□□□□ -1.23
BRCC3-208ENST00000453705 APOA1P02647 267 aa7.4□□□□□ -1.23
BRCC3-208ENST00000453705 MMP9P14780 707 aa7.4□□□□□ -1.23
BRCC3-208ENST00000453705 CRABP2P29373 138 aa7.4□□□□□ -1.23
BRCC3-208ENST00000453705 HOXA9P31269 272 aa7.4□□□□□ -1.23
BRCC3-208ENST00000453705 RORAP35398 523 aa7.4□□□□□ -1.23
BRCC3-208ENST00000453705 CDKN2CP42773 168 aa7.4□□□□□ -1.23
BRCC3-208ENST00000453705 MAGEB1P43366 347 aa7.4□□□□□ -1.23
BRCC3-208ENST00000453705 LIMK2P53671 638 aa7.4□□□□□ -1.23
BRCC3-208ENST00000453705 CDH13P55290 713 aa7.4□□□□□ -1.23
BRCC3-208ENST00000453705 RHAGQ02094 409 aa7.4□□□□□ -1.23
BRCC3-208ENST00000453705 PDE7AQ13946 482 aa7.4□□□□□ -1.23
BRCC3-208ENST00000453705 SPCS2Q15005 226 aa7.4□□□□□ -1.23
BRCC3-208ENST00000453705 SLC44A4Q53GD3 710 aa7.4□□□□□ -1.23
BRCC3-208ENST00000453705 KLHL26Q53HC5 615 aa7.4□□□□□ -1.23
BRCC3-208ENST00000453705 CARD17Q5XLA6 110 aa7.4□□□□□ -1.23
BRCC3-208ENST00000453705 SLC22A10Q63ZE4 541 aa7.4□□□□□ -1.23
BRCC3-208ENST00000453705 MCATQ8IVS2 390 aaKnown RBP7.4□□□□□ -1.23
BRCC3-208ENST00000453705 PM20D2Q8IYS1 436 aa7.4□□□□□ -1.23
BRCC3-208ENST00000453705 BEND2Q8NDZ0 799 aa7.4□□□□□ -1.23
BRCC3-208ENST00000453705 ATL1Q8WXF7 558 aa7.4□□□□□ -1.23
BRCC3-208ENST00000453705 OSTF1Q92882 214 aa7.4□□□□□ -1.23
BRCC3-208ENST00000453705 CERS2Q96G23 380 aa7.4□□□□□ -1.23
BRCC3-208ENST00000453705 PRRC1Q96M27 445 aa7.4□□□□□ -1.23
BRCC3-208ENST00000453705 BTBD9Q96Q07 612 aa7.4□□□□□ -1.23
BRCC3-208ENST00000453705 TGS1Q96RS0 853 aaKnown RBP7.4□□□□□ -1.23
BRCC3-208ENST00000453705 FAM110AQ9BQ89 295 aa7.4□□□□□ -1.23
BRCC3-208ENST00000453705 SLC39A8Q9C0K1 460 aa7.4□□□□□ -1.23
BRCC3-208ENST00000453705 PLK3Q9H4B4 646 aa7.4□□□□□ -1.23
BRCC3-208ENST00000453705 EPB41L1Q9H4G0 881 aa7.4□□□□□ -1.23
BRCC3-208ENST00000453705 TREX1Q9NSU2 369 aa7.4□□□□□ -1.23
BRCC3-208ENST00000453705 SEMA5BQ9P283 1151 aa7.4□□□□□ -1.23
BRCC3-208ENST00000453705 NKX1-2Q9UD57 310 aaPredicted RBP7.4□□□□□ -1.23
BRCC3-208ENST00000453705 PRSS50Q9UI38 385 aa7.4□□□□□ -1.23
BRCC3-208ENST00000453705 CA14Q9ULX7 337 aa7.4□□□□□ -1.23
BRCC3-208ENST00000453705 CFAP20Q9Y6A4 193 aaKnown RBP7.4□□□□□ -1.23
BRCC3-208ENST00000453705 LAMA2P24043 3122 aaKnown RBP7.39□□□□□ -1.23
BRCC3-208ENST00000453705 AGAP5A6NIR3 686 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 FAM90A8PA6NJQ4 464 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 SH2D7A6NKC9 451 aaPredicted RBP7.39□□□□□ -1.23
BRCC3-208ENST00000453705 CGB1A6NKQ9 187 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 IDH3BO43837 385 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 GLRA3O75311 464 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 KRT8P05787 483 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 FAM90A13PP0C7W8 464 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 FAM90A24PP0C7X0 464 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 HMGA1P17096 107 aaKnown RBP7.39□□□□□ -1.23
BRCC3-208ENST00000453705 PIK3R1P27986 724 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 RPA3P35244 121 aaPredicted RBP7.39□□□□□ -1.23
BRCC3-208ENST00000453705 SPAM1P38567 509 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 HPCAP84074 193 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms