RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 GCM2O75603 506 aaPredicted RBP17.77■□□□□ 0.44
PTPA-223ENST00000452489 CD9P21926 228 aa17.77■□□□□ 0.44
PTPA-223ENST00000452489 PTBP1P26599 531 aaKnown RBP eCLIP17.77■□□□□ 0.444e-7■■■□□ 15.4
PTPA-223ENST00000452489 ERVK-25P63136 954 aa17.77■□□□□ 0.44
PTPA-223ENST00000452489 SERTAD2Q14140 314 aa17.77■□□□□ 0.44
PTPA-223ENST00000452489 INSL4Q14641 139 aa17.77■□□□□ 0.44
PTPA-223ENST00000452489 PRAMEF19Q5SWL8 479 aa17.77■□□□□ 0.44
PTPA-223ENST00000452489 FAM182BQ5T319 152 aa17.77■□□□□ 0.44
PTPA-223ENST00000452489 SLC27A4Q6P1M0 643 aa17.77■□□□□ 0.44
PTPA-223ENST00000452489 CLECL1Q8IZS7 167 aa17.77■□□□□ 0.44
PTPA-223ENST00000452489 STK40Q8N2I9 435 aa17.77■□□□□ 0.44
PTPA-223ENST00000452489 ZNF454Q8N9F8 522 aa17.77■□□□□ 0.44
PTPA-223ENST00000452489 ZNF527Q8NB42 609 aa17.77■□□□□ 0.44
PTPA-223ENST00000452489 PLA2G15Q8NCC3 412 aa17.77■□□□□ 0.44
PTPA-223ENST00000452489 OR4A15Q8NGL6 344 aa17.77■□□□□ 0.44
PTPA-223ENST00000452489 CNOT9Q92600 299 aaKnown RBP17.77■□□□□ 0.44
PTPA-223ENST00000452489 NELL1Q92832 810 aa17.77■□□□□ 0.44
PTPA-223ENST00000452489 CDKN2AIPNLQ96HQ2 116 aa17.77■□□□□ 0.44
PTPA-223ENST00000452489 DPAGT1Q9H3H5 408 aa17.77■□□□□ 0.44
PTPA-223ENST00000452489 GOLGA2P5Q9HBQ8 144 aa17.77■□□□□ 0.44
PTPA-223ENST00000452489 ENAMQ9NRM1 1142 aa17.77■□□□□ 0.44
PTPA-223ENST00000452489 OR6C2Q9NZP2 312 aa17.77■□□□□ 0.44
PTPA-223ENST00000452489 RHCGQ9UBD6 479 aa17.77■□□□□ 0.44
PTPA-223ENST00000452489 COL16A1Q07092 1604 aaPredicted RBP17.77■□□□□ 0.44
PTPA-223ENST00000452489 RAB19A4D1S5 217 aa17.77■□□□□ 0.44
PTPA-223ENST00000452489 UPK3BL1B0FP48 263 aa17.77■□□□□ 0.44
PTPA-223ENST00000452489 UPK3BL2E5RIL1 263 aa17.77■□□□□ 0.44
PTPA-223ENST00000452489 SGCEO43556 437 aa17.77■□□□□ 0.44
PTPA-223ENST00000452489 ATP5A1P25705 553 aaKnown RBP17.77■□□□□ 0.44
PTPA-223ENST00000452489 GIFP27352 417 aa17.77■□□□□ 0.44
PTPA-223ENST00000452489 ZSWIM7Q19AV6 140 aa17.77■□□□□ 0.44
PTPA-223ENST00000452489 GSG1Q2KHT4 349 aa17.77■□□□□ 0.44
PTPA-223ENST00000452489 MFSD14CQ5VZR4 134 aa17.77■□□□□ 0.44
PTPA-223ENST00000452489 C12orf66Q96MD2 445 aa17.77■□□□□ 0.44
PTPA-223ENST00000452489 ELOVL2Q9NXB9 296 aa17.77■□□□□ 0.44
PTPA-223ENST00000452489 NUDT4Q9NZJ9 180 aa17.77■□□□□ 0.44
PTPA-223ENST00000452489 FNDC3AQ9Y2H6 1198 aaKnown RBP17.77■□□□□ 0.44
PTPA-223ENST00000452489 RRN3P2A6NIE6 340 aa17.76■□□□□ 0.43
PTPA-223ENST00000452489 NBNO60934 754 aa17.76■□□□□ 0.43
PTPA-223ENST00000452489 ATG12O94817 140 aa17.76■□□□□ 0.43
PTPA-223ENST00000452489 VIPR1P32241 457 aa17.76■□□□□ 0.43
PTPA-223ENST00000452489 CCR6P51684 374 aa17.76■□□□□ 0.43
PTPA-223ENST00000452489 CASP9P55211 416 aa17.76■□□□□ 0.43
PTPA-223ENST00000452489 FGL2Q14314 439 aa17.76■□□□□ 0.43
PTPA-223ENST00000452489 HFEQ30201 348 aa17.76■□□□□ 0.43
PTPA-223ENST00000452489 FAM26DQ5JW98 314 aa17.76■□□□□ 0.43
PTPA-223ENST00000452489 TRIM46Q7Z4K8 759 aa17.76■□□□□ 0.43
PTPA-223ENST00000452489 GATAD2BQ8WXI9 593 aa17.76■□□□□ 0.43
PTPA-223ENST00000452489 COPS8Q99627 209 aa17.76■□□□□ 0.43
PTPA-223ENST00000452489 ACPTQ9BZG2 426 aa17.76■□□□□ 0.43
PTPA-223ENST00000452489 ASIC5Q9NY37 505 aa17.76■□□□□ 0.43
PTPA-223ENST00000452489 CLCA2Q9UQC9 943 aa17.76■□□□□ 0.43
PTPA-223ENST00000452489 TRBV23-1A0A0A0MS06 115 aa17.76■□□□□ 0.43
PTPA-223ENST00000452489 MAGEB17A8MXT2 336 aa17.76■□□□□ 0.43
PTPA-223ENST00000452489 MANBAO00462 879 aa17.76■□□□□ 0.43
PTPA-223ENST00000452489 HPXP02790 462 aa17.76■□□□□ 0.43
PTPA-223ENST00000452489 C1SP09871 688 aa17.76■□□□□ 0.43
PTPA-223ENST00000452489 BTF3P20290 206 aaKnown RBP17.76■□□□□ 0.43
PTPA-223ENST00000452489 DUOXA1Q1HG43 343 aa17.76■□□□□ 0.43
PTPA-223ENST00000452489 CEACAM20Q6UY09 585 aa17.76■□□□□ 0.43
PTPA-223ENST00000452489 HSD17B13Q7Z5P4 300 aaPredicted RBP17.76■□□□□ 0.43
PTPA-223ENST00000452489 FAM9CQ8IZT9 166 aa17.76■□□□□ 0.43
PTPA-223ENST00000452489 IMP3Q9NV31 184 aaKnown RBP17.76■□□□□ 0.43
PTPA-223ENST00000452489 PCDHB7Q9Y5E2 793 aa17.76■□□□□ 0.43
PTPA-223ENST00000452489 ALPK3Q96L96 1907 aa17.76■□□□□ 0.43
PTPA-223ENST00000452489 COL11A1P12107 1806 aaPredicted RBP17.76■□□□□ 0.43
PTPA-223ENST00000452489 MMP12P39900 470 aa17.75■□□□□ 0.43
PTPA-223ENST00000452489 RNASE12Q5GAN4 147 aaKnown RBP17.75■□□□□ 0.43
PTPA-223ENST00000452489 CTSL3PQ5NE16 218 aa17.75■□□□□ 0.43
PTPA-223ENST00000452489 VASNQ6EMK4 673 aa17.75■□□□□ 0.43
PTPA-223ENST00000452489 LYPD4Q6UWN0 246 aa17.75■□□□□ 0.43
PTPA-223ENST00000452489 IL20RBQ6UXL0 311 aa17.75■□□□□ 0.43
PTPA-223ENST00000452489 BHLHA9Q7RTU4 235 aa17.75■□□□□ 0.43
PTPA-223ENST00000452489 SLC16A13Q7RTY0 426 aa17.75■□□□□ 0.43
PTPA-223ENST00000452489 OR1S1Q8NH92 325 aa17.75■□□□□ 0.43
PTPA-223ENST00000452489 NKX6-2Q9C056 277 aaPredicted RBP17.75■□□□□ 0.43
PTPA-223ENST00000452489 NDRG3Q9UGV2 375 aa17.75■□□□□ 0.43
PTPA-223ENST00000452489 AKT3Q9Y243 479 aa17.75■□□□□ 0.43
PTPA-223ENST00000452489 TMEM5Q9Y2B1 443 aa17.75■□□□□ 0.43
PTPA-223ENST00000452489 GSTK1Q9Y2Q3 226 aa17.75■□□□□ 0.43
PTPA-223ENST00000452489 KCNK7Q9Y2U2 307 aa17.75■□□□□ 0.43
PTPA-223ENST00000452489 NUBP2Q9Y5Y2 271 aa17.75■□□□□ 0.43
PTPA-223ENST00000452489 CHURC1-FNTBB4DL54 471 aa17.75■□□□□ 0.43
PTPA-223ENST00000452489 L7N2F9 121 aa17.75■□□□□ 0.43
PTPA-223ENST00000452489 TAPBPO15533 448 aa17.75■□□□□ 0.43
PTPA-223ENST00000452489 PAGE1O75459 146 aa17.75■□□□□ 0.43
PTPA-223ENST00000452489 EIF3GO75821 320 aaKnown RBP eCLIP17.75■□□□□ 0.43
PTPA-223ENST00000452489 ALPIP09923 528 aa17.75■□□□□ 0.43
PTPA-223ENST00000452489 HIST1H2AGP0C0S8 130 aaPredicted RBP17.75■□□□□ 0.43
PTPA-223ENST00000452489 SDC1P18827 310 aa17.75■□□□□ 0.43
PTPA-223ENST00000452489 RAB3BP20337 219 aa17.75■□□□□ 0.43
PTPA-223ENST00000452489 HIST1H2ADP20671 130 aa17.75■□□□□ 0.43
PTPA-223ENST00000452489 AHCYP23526 432 aa17.75■□□□□ 0.43
PTPA-223ENST00000452489 VEZF1Q14119 521 aa17.75■□□□□ 0.43
PTPA-223ENST00000452489 ZBTB6Q15916 424 aa17.75■□□□□ 0.43
PTPA-223ENST00000452489 HIST2H2AA3Q6FI13 130 aa17.75■□□□□ 0.43
PTPA-223ENST00000452489 TMEM88Q6PEY1 159 aa17.75■□□□□ 0.43
PTPA-223ENST00000452489 ZER1Q7Z7L7 766 aa17.75■□□□□ 0.43
PTPA-223ENST00000452489 HIST1H2AHQ96KK5 128 aa17.75■□□□□ 0.43
PTPA-223ENST00000452489 UROC1Q96N76 676 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms