RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-209ENST00000451859 TTC19Q6DKK2 380 aaPredicted RBP8.05□□□□□ -1.12
RFX3-209ENST00000451859 CYP20A1Q6UW02 462 aa8.05□□□□□ -1.12
RFX3-209ENST00000451859 DGAT2L6Q6ZPD8 337 aa8.05□□□□□ -1.12
RFX3-209ENST00000451859 GPR180Q86V85 440 aa8.05□□□□□ -1.12
RFX3-209ENST00000451859 SPPL2CQ8IUH8 684 aa8.05□□□□□ -1.12
RFX3-209ENST00000451859 SIAH3Q8IW03 269 aa8.05□□□□□ -1.12
RFX3-209ENST00000451859 GHDCQ8N2G8 530 aa8.05□□□□□ -1.12
RFX3-209ENST00000451859 MORN4Q8NDC4 146 aa8.05□□□□□ -1.12
RFX3-209ENST00000451859 PSD4Q8NDX1 1056 aa8.05□□□□□ -1.12
RFX3-209ENST00000451859 OR52B6Q8NGF0 335 aa8.05□□□□□ -1.12
RFX3-209ENST00000451859 PTPMT1Q8WUK0 201 aaPredicted RBP8.05□□□□□ -1.12
RFX3-209ENST00000451859 UCN3Q969E3 161 aa8.05□□□□□ -1.12
RFX3-209ENST00000451859 ANKRD9Q96BM1 317 aaPredicted RBP8.05□□□□□ -1.12
RFX3-209ENST00000451859 REPS1Q96D71 796 aa8.05□□□□□ -1.12
RFX3-209ENST00000451859 NSUN5Q96P11 429 aaKnown RBP8.05□□□□□ -1.12
RFX3-209ENST00000451859 GAL3ST4Q96RP7 486 aa8.05□□□□□ -1.12
RFX3-209ENST00000451859 RASL10BQ96S79 203 aa8.05□□□□□ -1.12
RFX3-209ENST00000451859 CNPPD1Q9BV87 410 aa8.05□□□□□ -1.12
RFX3-209ENST00000451859 RPF2Q9H7B2 306 aaKnown RBP8.05□□□□□ -1.12
RFX3-209ENST00000451859 TIMMDC1Q9NPL8 285 aa8.05□□□□□ -1.12
RFX3-209ENST00000451859 SEMA4BQ9NPR2 832 aaPredicted RBP8.05□□□□□ -1.12
RFX3-209ENST00000451859 MYOTQ9UBF9 498 aa8.05□□□□□ -1.12
RFX3-209ENST00000451859 VTI1BQ9UEU0 232 aa8.05□□□□□ -1.12
RFX3-209ENST00000451859 ADGRE2Q9UHX3 823 aa8.05□□□□□ -1.12
RFX3-209ENST00000451859 PHF11Q9UIL8 331 aa8.05□□□□□ -1.12
RFX3-209ENST00000451859 NFU1Q9UMS0 254 aa8.05□□□□□ -1.12
RFX3-209ENST00000451859 YARS2Q9Y2Z4 477 aaKnown RBP8.05□□□□□ -1.12
RFX3-209ENST00000451859 ATG4BQ9Y4P1 393 aa8.05□□□□□ -1.12
RFX3-209ENST00000451859 PCDHGA11Q9Y5H2 935 aa8.05□□□□□ -1.12
RFX3-209ENST00000451859 TNPO3Q9Y5L0 923 aaKnown RBP8.05□□□□□ -1.12
RFX3-209ENST00000451859 A0A087WUV0 522 aaPredicted RBP8.04□□□□□ -1.12
RFX3-209ENST00000451859 PINLYPA6NC86 204 aa8.04□□□□□ -1.12
RFX3-209ENST00000451859 WASHC1A8K0Z3 465 aa8.04□□□□□ -1.12
RFX3-209ENST00000451859 KLRC4-KLRK1H3BQV0 150 aa8.04□□□□□ -1.12
RFX3-209ENST00000451859 TMPRSS11DO60235 418 aa8.04□□□□□ -1.12
RFX3-209ENST00000451859 KLK8O60259 260 aa8.04□□□□□ -1.12
RFX3-209ENST00000451859 ZNF354AO60765 605 aaPredicted RBP8.04□□□□□ -1.12
RFX3-209ENST00000451859 PDE9AO76083 593 aa8.04□□□□□ -1.12
RFX3-209ENST00000451859 SCELO95171 688 aa8.04□□□□□ -1.12
RFX3-209ENST00000451859 CLDN9O95484 217 aa8.04□□□□□ -1.12
RFX3-209ENST00000451859 AIFM1O95831 613 aa8.04□□□□□ -1.12
RFX3-209ENST00000451859 TUBB4AP04350 444 aa8.04□□□□□ -1.12
RFX3-209ENST00000451859 TPOP07202 933 aa8.04□□□□□ -1.12
RFX3-209ENST00000451859 RBP1P09455 135 aa8.04□□□□□ -1.12
RFX3-209ENST00000451859 RHOXF2BP0C7M4 288 aa8.04□□□□□ -1.12
RFX3-209ENST00000451859 NR2F6P10588 404 aa8.04□□□□□ -1.12
RFX3-209ENST00000451859 PTX3P26022 381 aaPredicted RBP8.04□□□□□ -1.12
RFX3-209ENST00000451859 TLX1P31314 330 aaPredicted RBP8.04□□□□□ -1.12
RFX3-209ENST00000451859 BSGP35613 385 aa8.04□□□□□ -1.12
RFX3-209ENST00000451859 BUD31P41223 144 aaPredicted RBP8.04□□□□□ -1.12
RFX3-209ENST00000451859 MAGEA12P43365 314 aa8.04□□□□□ -1.12
RFX3-209ENST00000451859 STT3AP46977 705 aa8.04□□□□□ -1.12
RFX3-209ENST00000451859 NR0B1P51843 470 aaKnown RBP8.04□□□□□ -1.12
RFX3-209ENST00000451859 HERVK_113P63132 956 aa8.04□□□□□ -1.12
RFX3-209ENST00000451859 ERVK-8P63133 956 aa8.04□□□□□ -1.12
RFX3-209ENST00000451859 RNF4P78317 190 aa8.04□□□□□ -1.12
RFX3-209ENST00000451859 ADORA2A-AS1P86434 159 aa8.04□□□□□ -1.12
RFX3-209ENST00000451859 PLIN5Q00G26 463 aa8.04□□□□□ -1.12
RFX3-209ENST00000451859 ASPHQ12797 758 aa8.04□□□□□ -1.12
RFX3-209ENST00000451859 PCBP2Q15366 365 aaKnown RBP eCLIP8.04□□□□□ -1.122e-6■■■□□ 16
RFX3-209ENST00000451859 TSNAXIP1Q2TAA8 658 aa8.04□□□□□ -1.12
RFX3-209ENST00000451859 SP5Q6BEB4 398 aaPredicted RBP8.04□□□□□ -1.12
RFX3-209ENST00000451859 MTFR2Q6P444 385 aa8.04□□□□□ -1.12
RFX3-209ENST00000451859 CD163Q86VB7 1156 aa8.04□□□□□ -1.12
RFX3-209ENST00000451859 NUDT13Q86X67 352 aa8.04□□□□□ -1.12
RFX3-209ENST00000451859 RELL1Q8IUW5 271 aa8.04□□□□□ -1.12
RFX3-209ENST00000451859 GSPT2Q8IYD1 628 aaKnown RBP8.04□□□□□ -1.12
RFX3-209ENST00000451859 ARMC10Q8N2F6 343 aa8.04□□□□□ -1.12
RFX3-209ENST00000451859 ZNF808Q8N4W9 903 aaPredicted RBP8.04□□□□□ -1.12
RFX3-209ENST00000451859 POGLUT1Q8NBL1 392 aa8.04□□□□□ -1.12
RFX3-209ENST00000451859 AGAP11Q8TF27 550 aa8.04□□□□□ -1.12
RFX3-209ENST00000451859 DCAKDQ8WVC6 231 aa8.04□□□□□ -1.12
RFX3-209ENST00000451859 RHOXF2Q9BQY4 288 aa8.04□□□□□ -1.12
RFX3-209ENST00000451859 ERVK-6Q9BXR3 956 aa8.04□□□□□ -1.12
RFX3-209ENST00000451859 TSPYL1Q9H0U9 437 aa8.04□□□□□ -1.12
RFX3-209ENST00000451859 DEFB127Q9H1M4 99 aa8.04□□□□□ -1.12
RFX3-209ENST00000451859 TRIM45Q9H8W5 580 aaPredicted RBP8.04□□□□□ -1.12
RFX3-209ENST00000451859 DEPPQ9NTK1 212 aa8.04□□□□□ -1.12
RFX3-209ENST00000451859 LYARQ9NX58 379 aaKnown RBP8.04□□□□□ -1.12
RFX3-209ENST00000451859 PCTPQ9UKL6 214 aa8.04□□□□□ -1.12
RFX3-209ENST00000451859 PPIEQ9UNP9 301 aaKnown RBP8.04□□□□□ -1.12
RFX3-209ENST00000451859 ERVK-19Q9WJR5 959 aa8.04□□□□□ -1.12
RFX3-209ENST00000451859 APCP25054 2843 aa8.04□□□□□ -1.12
RFX3-209ENST00000451859 MED12Q93074 2177 aa8.04□□□□□ -1.12
RFX3-209ENST00000451859 ADGRG4Q8IZF6 3080 aa8.03□□□□□ -1.12
RFX3-209ENST00000451859 A0A0A6YYD5 115 aa8.03□□□□□ -1.12
RFX3-209ENST00000451859 A0A1B0GTH9 108 aa8.03□□□□□ -1.12
RFX3-209ENST00000451859 A0A1W2PR48 441 aa8.03□□□□□ -1.12
RFX3-209ENST00000451859 A0A1W2PS29 197 aa8.03□□□□□ -1.12
RFX3-209ENST00000451859 H0YIV9 168 aa8.03□□□□□ -1.12
RFX3-209ENST00000451859 GOLGA8RI6L899 631 aa8.03□□□□□ -1.12
RFX3-209ENST00000451859 PRRG2O14669 202 aa8.03□□□□□ -1.12
RFX3-209ENST00000451859 DYRK3O43781 588 aa8.03□□□□□ -1.12
RFX3-209ENST00000451859 UGDHO60701 494 aa8.03□□□□□ -1.12
RFX3-209ENST00000451859 LRATO95237 230 aa8.03□□□□□ -1.12
RFX3-209ENST00000451859 KLK1P06870 262 aa8.03□□□□□ -1.12
RFX3-209ENST00000451859 FAM58BPP0C7Q3 252 aa8.03□□□□□ -1.12
RFX3-209ENST00000451859 CCL3P10147 92 aa8.03□□□□□ -1.12
RFX3-209ENST00000451859 ALOX15P16050 662 aaPredicted RBP8.03□□□□□ -1.12
RFX3-209ENST00000451859 PTGS2P35354 604 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms