RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 B3GNTL1Q67FW5 361 aaPredicted RBP18.29■□□□□ 0.52
HMGA1-205ENST00000447654 C22orf42Q6IC83 251 aa18.29■□□□□ 0.52
HMGA1-205ENST00000447654 ZNF551Q7Z340 670 aaPredicted RBP18.29■□□□□ 0.52
HMGA1-205ENST00000447654 FAM217AQ8IXS0 508 aa18.29■□□□□ 0.52
HMGA1-205ENST00000447654 PCSK9Q8NBP7 692 aaKnown RBP18.29■□□□□ 0.52
HMGA1-205ENST00000447654 FATE1Q969F0 183 aa18.29■□□□□ 0.52
HMGA1-205ENST00000447654 ARL5BQ96KC2 179 aa18.29■□□□□ 0.52
HMGA1-205ENST00000447654 C10orf90Q96M02 699 aa18.29■□□□□ 0.52
HMGA1-205ENST00000447654 FAM193BQ96PV7 902 aaPredicted RBP18.29■□□□□ 0.52
HMGA1-205ENST00000447654 DPH7Q9BTV6 452 aa18.29■□□□□ 0.52
HMGA1-205ENST00000447654 FN3KQ9H479 309 aa18.29■□□□□ 0.52
HMGA1-205ENST00000447654 ZCCHC4Q9H5U6 513 aa18.29■□□□□ 0.52
HMGA1-205ENST00000447654 COMMD3Q9UBI1 195 aa18.29■□□□□ 0.52
HMGA1-205ENST00000447654 CTSFQ9UBX1 484 aa18.29■□□□□ 0.52
HMGA1-205ENST00000447654 GPN3Q9UHW5 284 aaPredicted RBP18.29■□□□□ 0.52
HMGA1-205ENST00000447654 DTX4Q9Y2E6 619 aa18.29■□□□□ 0.52
HMGA1-205ENST00000447654 RPL36Q9Y3U8 105 aaKnown RBP18.29■□□□□ 0.52
HMGA1-205ENST00000447654 ARRDC5A6NEK1 342 aa18.28■□□□□ 0.52
HMGA1-205ENST00000447654 FGF10O15520 208 aaPredicted RBP18.28■□□□□ 0.52
HMGA1-205ENST00000447654 IRAK2O43187 625 aa18.28■□□□□ 0.52
HMGA1-205ENST00000447654 SUV39H1O43463 412 aa18.28■□□□□ 0.52
HMGA1-205ENST00000447654 LDB2O43679 373 aa18.28■□□□□ 0.52
HMGA1-205ENST00000447654 BTF3P20290 206 aaKnown RBP18.28■□□□□ 0.52
HMGA1-205ENST00000447654 CD96P40200 585 aa18.28■□□□□ 0.52
HMGA1-205ENST00000447654 SP3Q02447 781 aa18.28■□□□□ 0.52
HMGA1-205ENST00000447654 DSC1Q08554 894 aa18.28■□□□□ 0.52
HMGA1-205ENST00000447654 KRTCAP2Q8N6L1 136 aa18.28■□□□□ 0.52
HMGA1-205ENST00000447654 CDC26Q8NHZ8 85 aa18.28■□□□□ 0.52
HMGA1-205ENST00000447654 GPRC5BQ9NZH0 403 aa18.28■□□□□ 0.52
HMGA1-205ENST00000447654 MLXQ9UH92 298 aa18.28■□□□□ 0.52
HMGA1-205ENST00000447654 ING1Q9UK53 422 aaPredicted RBP18.28■□□□□ 0.52
HMGA1-205ENST00000447654 PRG3Q9Y2Y8 225 aaPredicted RBP18.28■□□□□ 0.52
HMGA1-205ENST00000447654 GTPBP1O00178 669 aaKnown RBP18.28■□□□□ 0.52
HMGA1-205ENST00000447654 RPP40O75818 363 aaKnown RBP18.28■□□□□ 0.52
HMGA1-205ENST00000447654 UGT2B7P16662 529 aa18.28■□□□□ 0.52
HMGA1-205ENST00000447654 NNMTP40261 264 aa18.28■□□□□ 0.52
HMGA1-205ENST00000447654 PTGES3Q15185 160 aaKnown RBP18.28■□□□□ 0.52
HMGA1-205ENST00000447654 MPEG1Q2M385 716 aa18.28■□□□□ 0.52
HMGA1-205ENST00000447654 FBXO48Q5FWF7 155 aa18.28■□□□□ 0.52
HMGA1-205ENST00000447654 LIPKQ5VXJ0 399 aa18.28■□□□□ 0.52
HMGA1-205ENST00000447654 PDE12Q6L8Q7 609 aaKnown RBP18.28■□□□□ 0.52
HMGA1-205ENST00000447654 TTC9BQ8N6N2 239 aa18.28■□□□□ 0.52
HMGA1-205ENST00000447654 ASB12Q8WXK4 309 aa18.28■□□□□ 0.52
HMGA1-205ENST00000447654 ACOT12Q8WYK0 555 aa18.28■□□□□ 0.52
HMGA1-205ENST00000447654 NSMAFQ92636 917 aa18.28■□□□□ 0.52
HMGA1-205ENST00000447654 OTULINQ96BN8 352 aa18.28■□□□□ 0.52
HMGA1-205ENST00000447654 MYO19Q96H55 970 aa18.28■□□□□ 0.52
HMGA1-205ENST00000447654 CDK15Q96Q40 435 aa18.28■□□□□ 0.52
HMGA1-205ENST00000447654 ABCG4Q9H172 646 aa18.28■□□□□ 0.52
HMGA1-205ENST00000447654 LRTM1Q9HBL6 345 aa18.28■□□□□ 0.52
HMGA1-205ENST00000447654 HCSTQ9UBK5 93 aa18.28■□□□□ 0.52
HMGA1-205ENST00000447654 FTSJ1Q9UET6 329 aa18.28■□□□□ 0.52
HMGA1-205ENST00000447654 NDOR1Q9UHB4 597 aa18.28■□□□□ 0.52
HMGA1-205ENST00000447654 CYB5R1Q9UHQ9 305 aa18.28■□□□□ 0.52
HMGA1-205ENST00000447654 PLCL2Q9UPR0 1127 aa18.28■□□□□ 0.52
HMGA1-205ENST00000447654 WWP2O00308 870 aa18.27■□□□□ 0.52
HMGA1-205ENST00000447654 HPGDSO60760 199 aa18.27■□□□□ 0.52
HMGA1-205ENST00000447654 PAGE1O75459 146 aa18.27■□□□□ 0.52
HMGA1-205ENST00000447654 RPLP2P05387 115 aaKnown RBP18.27■□□□□ 0.52
HMGA1-205ENST00000447654 PRPS2P11908 318 aa18.27■□□□□ 0.52
HMGA1-205ENST00000447654 CXCL3P19876 107 aa18.27■□□□□ 0.52
HMGA1-205ENST00000447654 GRK4P32298 578 aa18.27■□□□□ 0.52
HMGA1-205ENST00000447654 GSTM5P46439 218 aa18.27■□□□□ 0.52
HMGA1-205ENST00000447654 CENPAP49450 140 aa18.27■□□□□ 0.52
HMGA1-205ENST00000447654 SP140Q13342 867 aa18.27■□□□□ 0.52
HMGA1-205ENST00000447654 TEAD4Q15561 434 aa18.27■□□□□ 0.52
HMGA1-205ENST00000447654 FRMPD2BQ6IN97 320 aa18.27■□□□□ 0.52
HMGA1-205ENST00000447654 WASH2PQ6VEQ5 465 aa18.27■□□□□ 0.52
HMGA1-205ENST00000447654 QSOX2Q6ZRP7 698 aa18.27■□□□□ 0.52
HMGA1-205ENST00000447654 SPATA2LQ8IUW3 424 aaPredicted RBP18.27■□□□□ 0.52
HMGA1-205ENST00000447654 DENND1CQ8IV53 801 aa18.27■□□□□ 0.52
HMGA1-205ENST00000447654 SCN4BQ8IWT1 228 aa18.27■□□□□ 0.52
HMGA1-205ENST00000447654 LAS2Q8IYD9 372 aa18.27■□□□□ 0.52
HMGA1-205ENST00000447654 LGI4Q8N135 537 aa18.27■□□□□ 0.52
HMGA1-205ENST00000447654 PIAS4Q8N2W9 510 aaPredicted RBP18.27■□□□□ 0.52
HMGA1-205ENST00000447654 SCARB1Q8WTV0 552 aa18.27■□□□□ 0.52
HMGA1-205ENST00000447654 ADAMTS14Q8WXS8 1223 aa18.27■□□□□ 0.52
HMGA1-205ENST00000447654 DOHHQ9BU89 302 aa18.27■□□□□ 0.52
HMGA1-205ENST00000447654 VWA8A3KMH1 1905 aa18.27■□□□□ 0.52
HMGA1-205ENST00000447654 A0A1W2PQH9 124 aa18.27■□□□□ 0.51
HMGA1-205ENST00000447654 OR51F1A6NGY5 319 aa18.27■□□□□ 0.51
HMGA1-205ENST00000447654 NCF1BA6NI72 391 aaPredicted RBP18.27■□□□□ 0.51
HMGA1-205ENST00000447654 NCF1CA8MVU1 366 aaPredicted RBP18.27■□□□□ 0.51
HMGA1-205ENST00000447654 LINC00587B1AMM8 73 aa18.27■□□□□ 0.51
HMGA1-205ENST00000447654 OR7A17O14581 309 aa18.27■□□□□ 0.51
HMGA1-205ENST00000447654 RFXANKO14593 260 aa18.27■□□□□ 0.51
HMGA1-205ENST00000447654 PRKYO43930 277 aa18.27■□□□□ 0.51
HMGA1-205ENST00000447654 OR1I1O60431 355 aa18.27■□□□□ 0.51
HMGA1-205ENST00000447654 HOXC13P31276 330 aa18.27■□□□□ 0.51
HMGA1-205ENST00000447654 MSANTD2Q6P1R3 559 aa18.27■□□□□ 0.51
HMGA1-205ENST00000447654 C17orf107Q6ZR85 190 aa18.27■□□□□ 0.51
HMGA1-205ENST00000447654 RAB11FIP2Q7L804 512 aa18.27■□□□□ 0.51
HMGA1-205ENST00000447654 GOLGA7Q7Z5G4 137 aa18.27■□□□□ 0.51
HMGA1-205ENST00000447654 PTOV1Q86YD1 416 aa18.27■□□□□ 0.51
HMGA1-205ENST00000447654 THEM5Q8N1Q8 247 aa18.27■□□□□ 0.51
HMGA1-205ENST00000447654 FTMTQ8N4E7 242 aa18.27■□□□□ 0.51
HMGA1-205ENST00000447654 PNPLA1Q8N8W4 532 aa18.27■□□□□ 0.51
HMGA1-205ENST00000447654 OR52P1PQ8NH57 321 aa18.27■□□□□ 0.51
HMGA1-205ENST00000447654 SGK3Q96BR1 496 aa18.27■□□□□ 0.51
HMGA1-205ENST00000447654 UROC1Q96N76 676 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms