RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 IKBKGQ9Y6K9 419 aa6.49□□□□□ -1.37
LRRC28-203ENST00000447360 ABCA1O95477 2261 aa6.48□□□□□ -1.37
LRRC28-203ENST00000447360 SIAH2O43255 324 aa6.48□□□□□ -1.37
LRRC28-203ENST00000447360 CD5LO43866 347 aa6.48□□□□□ -1.37
LRRC28-203ENST00000447360 CTNSO60931 367 aa6.48□□□□□ -1.37
LRRC28-203ENST00000447360 RCBTB2O95199 551 aa6.48□□□□□ -1.37
LRRC28-203ENST00000447360 IFNA16P05015 189 aa6.48□□□□□ -1.37
LRRC28-203ENST00000447360 C8GP07360 202 aa6.48□□□□□ -1.37
LRRC28-203ENST00000447360 F7P08709 466 aaPredicted RBP6.48□□□□□ -1.37
LRRC28-203ENST00000447360 FAM157CP0CG43 387 aa6.48□□□□□ -1.37
LRRC28-203ENST00000447360 TCP1P17987 556 aaKnown RBP6.48□□□□□ -1.37
LRRC28-203ENST00000447360 CRYGSP22914 178 aa6.48□□□□□ -1.37
LRRC28-203ENST00000447360 HNF4AP41235 474 aa6.48□□□□□ -1.37
LRRC28-203ENST00000447360 DIO3P55073 304 aa6.48□□□□□ -1.37
LRRC28-203ENST00000447360 GNG11P61952 73 aa6.48□□□□□ -1.37
LRRC28-203ENST00000447360 BTN3A2P78410 334 aa6.48□□□□□ -1.37
LRRC28-203ENST00000447360 ASPHQ12797 758 aa6.48□□□□□ -1.37
LRRC28-203ENST00000447360 CTBP1Q13363 440 aa6.48□□□□□ -1.37
LRRC28-203ENST00000447360 DHX34Q14147 1143 aaKnown RBP6.48□□□□□ -1.37
LRRC28-203ENST00000447360 RCAN2Q14206 197 aa6.48□□□□□ -1.37
LRRC28-203ENST00000447360 CSHL1Q14406 222 aa6.48□□□□□ -1.37
LRRC28-203ENST00000447360 ETFDHQ16134 617 aa6.48□□□□□ -1.37
LRRC28-203ENST00000447360 WIPI1Q5MNZ9 446 aaPredicted RBP6.48□□□□□ -1.37
LRRC28-203ENST00000447360 PRAMEF20Q5VT98 475 aa6.48□□□□□ -1.37
LRRC28-203ENST00000447360 ARMC3Q5W041 872 aa6.48□□□□□ -1.37
LRRC28-203ENST00000447360 LRRC8EQ6NSJ5 796 aa6.48□□□□□ -1.37
LRRC28-203ENST00000447360 NEPROQ6NW34 567 aa6.48□□□□□ -1.37
LRRC28-203ENST00000447360 PIWIL4Q7Z3Z4 852 aaKnown RBP6.48□□□□□ -1.37
LRRC28-203ENST00000447360 DENND6AQ8IWF6 608 aa6.48□□□□□ -1.37
LRRC28-203ENST00000447360 PPIL6Q8IXY8 311 aa6.48□□□□□ -1.37
LRRC28-203ENST00000447360 ZNF441Q8N8Z8 693 aa6.48□□□□□ -1.37
LRRC28-203ENST00000447360 C9orf106Q8NAJ2 232 aa6.48□□□□□ -1.37
LRRC28-203ENST00000447360 C7orf57Q8NEG2 295 aa6.48□□□□□ -1.37
LRRC28-203ENST00000447360 GABPB2Q8TAK5 448 aaPredicted RBP6.48□□□□□ -1.37
LRRC28-203ENST00000447360 NUBPLQ8TB37 319 aa6.48□□□□□ -1.37
LRRC28-203ENST00000447360 SLC22A8Q8TCC7 542 aa6.48□□□□□ -1.37
LRRC28-203ENST00000447360 ZPLD1Q8TCW7 415 aa6.48□□□□□ -1.37
LRRC28-203ENST00000447360 SLC2A12Q8TD20 617 aa6.48□□□□□ -1.37
LRRC28-203ENST00000447360 TMEM171Q8WVE6 324 aa6.48□□□□□ -1.37
LRRC28-203ENST00000447360 SPACA9Q96E40 222 aaPredicted RBP6.48□□□□□ -1.37
LRRC28-203ENST00000447360 FAR2Q96K12 515 aa6.48□□□□□ -1.37
LRRC28-203ENST00000447360 DOHHQ9BU89 302 aa6.48□□□□□ -1.37
LRRC28-203ENST00000447360 OR8D2Q9GZM6 311 aa6.48□□□□□ -1.37
LRRC28-203ENST00000447360 CCDC68Q9H2F9 335 aa6.48□□□□□ -1.37
LRRC28-203ENST00000447360 KLHL31Q9H511 634 aa6.48□□□□□ -1.37
LRRC28-203ENST00000447360 C12orf49Q9H741 205 aa6.48□□□□□ -1.37
LRRC28-203ENST00000447360 PLAC1Q9HBJ0 212 aa6.48□□□□□ -1.37
LRRC28-203ENST00000447360 PROK2Q9HC23 129 aa6.48□□□□□ -1.37
LRRC28-203ENST00000447360 XAB2Q9HCS7 855 aaKnown RBP6.48□□□□□ -1.37
LRRC28-203ENST00000447360 CAMK2AQ9UQM7 478 aa6.48□□□□□ -1.37
LRRC28-203ENST00000447360 PDE10AQ9Y233 779 aa6.48□□□□□ -1.37
LRRC28-203ENST00000447360 COMMD10Q9Y6G5 202 aa6.48□□□□□ -1.37
LRRC28-203ENST00000447360 ROS1P08922 2347 aa6.47□□□□□ -1.37
LRRC28-203ENST00000447360 A0A088AWK7 358 aa6.47□□□□□ -1.37
LRRC28-203ENST00000447360 C17orf105B2RV13 164 aa6.47□□□□□ -1.37
LRRC28-203ENST00000447360 C4orf51C9J302 202 aa6.47□□□□□ -1.37
LRRC28-203ENST00000447360 RNF223E7ERA6 249 aa6.47□□□□□ -1.37
LRRC28-203ENST00000447360 CYR61O00622 381 aa6.47□□□□□ -1.37
LRRC28-203ENST00000447360 DNALI1O14645 258 aaPredicted RBP6.47□□□□□ -1.37
LRRC28-203ENST00000447360 TP73O15350 636 aa6.47□□□□□ -1.37
LRRC28-203ENST00000447360 TRIM3O75382 744 aaPredicted RBP6.47□□□□□ -1.37
LRRC28-203ENST00000447360 TRAPPC6AO75865 159 aa6.47□□□□□ -1.37
LRRC28-203ENST00000447360 HAUS5O94927 633 aa6.47□□□□□ -1.37
LRRC28-203ENST00000447360 HPNP05981 417 aa6.47□□□□□ -1.37
LRRC28-203ENST00000447360 HIST1H2AGP0C0S8 130 aaPredicted RBP6.47□□□□□ -1.37
LRRC28-203ENST00000447360 NID1P14543 1247 aa6.47□□□□□ -1.37
LRRC28-203ENST00000447360 PAMP19021 973 aa6.47□□□□□ -1.37
LRRC28-203ENST00000447360 HIST1H2ADP20671 130 aa6.47□□□□□ -1.37
LRRC28-203ENST00000447360 ZNF10P21506 573 aaPredicted RBP6.47□□□□□ -1.37
LRRC28-203ENST00000447360 GDF1P27539 372 aa6.47□□□□□ -1.37
LRRC28-203ENST00000447360 GABRB3P28472 473 aa6.47□□□□□ -1.37
LRRC28-203ENST00000447360 SERPINB3P29508 390 aa6.47□□□□□ -1.37
LRRC28-203ENST00000447360 THBS2P35442 1172 aa6.47□□□□□ -1.37
LRRC28-203ENST00000447360 CDK9P50750 372 aaKnown RBP6.47□□□□□ -1.37
LRRC28-203ENST00000447360 HNRNPFP52597 415 aaKnown RBP6.47□□□□□ -1.37
LRRC28-203ENST00000447360 ATP5J2P56134 94 aa6.47□□□□□ -1.37
LRRC28-203ENST00000447360 RAB38P57729 211 aa6.47□□□□□ -1.37
LRRC28-203ENST00000447360 STXBP1P61764 594 aaKnown RBP6.47□□□□□ -1.37
LRRC28-203ENST00000447360 TIAL1Q01085 375 aaKnown RBP eCLIP6.47□□□□□ -1.37
LRRC28-203ENST00000447360 FOXF2Q12947 444 aa6.47□□□□□ -1.37
LRRC28-203ENST00000447360 SP140Q13342 867 aa6.47□□□□□ -1.37
LRRC28-203ENST00000447360 GAB1Q13480 694 aa6.47□□□□□ -1.37
LRRC28-203ENST00000447360 RUNX2Q13950 521 aa6.47□□□□□ -1.37
LRRC28-203ENST00000447360 SERTAD2Q14140 314 aa6.47□□□□□ -1.37
LRRC28-203ENST00000447360 RCN2Q14257 317 aa6.47□□□□□ -1.37
LRRC28-203ENST00000447360 EFTUD2Q15029 972 aaKnown RBP eCLIP6.47□□□□□ -1.37
LRRC28-203ENST00000447360 KRTAP24-1Q3LI83 254 aa6.47□□□□□ -1.37
LRRC28-203ENST00000447360 DUPD1Q68J44 220 aa6.47□□□□□ -1.37
LRRC28-203ENST00000447360 CASC4Q6P4E1 433 aa6.47□□□□□ -1.37
LRRC28-203ENST00000447360 ZNF549Q6P9A3 640 aa6.47□□□□□ -1.37
LRRC28-203ENST00000447360 SCIMPQ6UWF3 145 aa6.47□□□□□ -1.37
LRRC28-203ENST00000447360 MBOAT1Q6ZNC8 495 aa6.47□□□□□ -1.37
LRRC28-203ENST00000447360 IGDCC3Q8IVU1 814 aa6.47□□□□□ -1.37
LRRC28-203ENST00000447360 PALM2Q8IXS6 379 aa6.47□□□□□ -1.37
LRRC28-203ENST00000447360 CPNE9Q8IYJ1 553 aa6.47□□□□□ -1.37
LRRC28-203ENST00000447360 ALDH16A1Q8IZ83 802 aa6.47□□□□□ -1.37
LRRC28-203ENST00000447360 ZNF321PQ8N8H1 164 aa6.47□□□□□ -1.37
LRRC28-203ENST00000447360 ANKRD53Q8N9V6 530 aa6.47□□□□□ -1.37
LRRC28-203ENST00000447360 TMEM52Q8NDY8 209 aa6.47□□□□□ -1.37
LRRC28-203ENST00000447360 OR10G3Q8NGC4 313 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms