RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 AGAP20933 346 aa19.2■□□□□ 0.66
SDC1-205ENST00000447124 CNR1P21554 472 aa19.2■□□□□ 0.66
SDC1-205ENST00000447124 TLX1P31314 330 aaPredicted RBP19.2■□□□□ 0.66
SDC1-205ENST00000447124 PTGS2P35354 604 aa19.2■□□□□ 0.66
SDC1-205ENST00000447124 SMSP52788 366 aa19.2■□□□□ 0.66
SDC1-205ENST00000447124 ASPHQ12797 758 aa19.2■□□□□ 0.66
SDC1-205ENST00000447124 TRAF3Q13114 568 aa19.2■□□□□ 0.66
SDC1-205ENST00000447124 BIKQ13323 160 aa19.2■□□□□ 0.66
SDC1-205ENST00000447124 MPEG1Q2M385 716 aa19.2■□□□□ 0.66
SDC1-205ENST00000447124 LYPD8Q6UX82 237 aa19.2■□□□□ 0.66
SDC1-205ENST00000447124 C7orf57Q8NEG2 295 aa19.2■□□□□ 0.66
SDC1-205ENST00000447124 FAM57AQ8TBR7 257 aa19.2■□□□□ 0.66
SDC1-205ENST00000447124 ATP6V1E2Q96A05 226 aa19.2■□□□□ 0.66
SDC1-205ENST00000447124 ZNF180Q9UJW8 692 aa19.2■□□□□ 0.66
SDC1-205ENST00000447124 PPT2Q9UMR5 302 aa19.2■□□□□ 0.66
SDC1-205ENST00000447124 APCP25054 2843 aa19.19■□□□□ 0.66
SDC1-205ENST00000447124 E9PLN8 166 aa19.19■□□□□ 0.66
SDC1-205ENST00000447124 C19orf84I3L1E1 186 aa19.19■□□□□ 0.66
SDC1-205ENST00000447124 PRRG2O14669 202 aa19.19■□□□□ 0.66
SDC1-205ENST00000447124 PGRMC2O15173 223 aa19.19■□□□□ 0.66
SDC1-205ENST00000447124 CDC40O60508 579 aaKnown RBP eCLIP19.19■□□□□ 0.663e-6■■■□□ 17.2
SDC1-205ENST00000447124 KRT38O76015 456 aa19.19■□□□□ 0.66
SDC1-205ENST00000447124 NADKO95544 446 aaPredicted RBP19.19■□□□□ 0.66
SDC1-205ENST00000447124 COX7A2P14406 83 aa19.19■□□□□ 0.66
SDC1-205ENST00000447124 GCAP28676 217 aa19.19■□□□□ 0.66
SDC1-205ENST00000447124 CCNG1P51959 295 aa19.19■□□□□ 0.66
SDC1-205ENST00000447124 PPIAP62937 165 aaKnown RBP19.19■□□□□ 0.66
SDC1-205ENST00000447124 PHEXP78562 749 aa19.19■□□□□ 0.66
SDC1-205ENST00000447124 RTL4Q6ZR62 310 aa19.19■□□□□ 0.66
SDC1-205ENST00000447124 SRRM1Q8IYB3 904 aaKnown RBP19.19■□□□□ 0.66
SDC1-205ENST00000447124 ST13P4Q8IZP2 240 aaPredicted RBP19.19■□□□□ 0.66
SDC1-205ENST00000447124 NUBPLQ8TB37 319 aa19.19■□□□□ 0.66
SDC1-205ENST00000447124 VKORC1Q9BQB6 163 aa19.19■□□□□ 0.66
SDC1-205ENST00000447124 LYARQ9NX58 379 aaKnown RBP19.19■□□□□ 0.66
SDC1-205ENST00000447124 IKBKGQ9Y6K9 419 aa19.19■□□□□ 0.66
SDC1-205ENST00000447124 FAM166BA8MTA8 275 aa19.18■□□□□ 0.66
SDC1-205ENST00000447124 GLSO94925 669 aaPredicted RBP19.18■□□□□ 0.66
SDC1-205ENST00000447124 AIFM1O95831 613 aa19.18■□□□□ 0.66
SDC1-205ENST00000447124 CLPSP04118 112 aa19.18■□□□□ 0.66
SDC1-205ENST00000447124 CCL3P10147 92 aa19.18■□□□□ 0.66
SDC1-205ENST00000447124 ZNF267Q14586 743 aaPredicted RBP19.18■□□□□ 0.66
SDC1-205ENST00000447124 TSNAXIP1Q2TAA8 658 aa19.18■□□□□ 0.66
SDC1-205ENST00000447124 ZNF791Q3KP31 576 aaPredicted RBP19.18■□□□□ 0.66
SDC1-205ENST00000447124 OPN5Q6U736 354 aa19.18■□□□□ 0.66
SDC1-205ENST00000447124 PHF10Q8WUB8 498 aaKnown RBP19.18■□□□□ 0.66
SDC1-205ENST00000447124 SGCZQ96LD1 299 aa19.18■□□□□ 0.66
SDC1-205ENST00000447124 SERPINI1Q99574 410 aa19.18■□□□□ 0.66
SDC1-205ENST00000447124 MRPL57Q9BQC6 102 aaKnown RBP19.18■□□□□ 0.66
SDC1-205ENST00000447124 SH2D2AQ9NP31 389 aa19.18■□□□□ 0.66
SDC1-205ENST00000447124 SEMA4BQ9NPR2 832 aaPredicted RBP19.18■□□□□ 0.66
SDC1-205ENST00000447124 COPS7AQ9UBW8 275 aa19.18■□□□□ 0.66
SDC1-205ENST00000447124 TMCO1Q9UM00 188 aa19.18■□□□□ 0.66
SDC1-205ENST00000447124 CACNA1CQ13936 2221 aa19.17■□□□□ 0.66
SDC1-205ENST00000447124 A0A087WUV0 522 aaPredicted RBP19.17■□□□□ 0.66
SDC1-205ENST00000447124 SMIM24O75264 130 aa19.17■□□□□ 0.66
SDC1-205ENST00000447124 TPOP07202 933 aa19.17■□□□□ 0.66
SDC1-205ENST00000447124 SNRPB2P08579 225 aaKnown RBP19.17■□□□□ 0.66
SDC1-205ENST00000447124 RPS17P08708 135 aaKnown RBP19.17■□□□□ 0.66
SDC1-205ENST00000447124 TSPAN8P19075 237 aa19.17■□□□□ 0.66
SDC1-205ENST00000447124 CNTFP26441 200 aa19.17■□□□□ 0.66
SDC1-205ENST00000447124 BUD31P41223 144 aaPredicted RBP19.17■□□□□ 0.66
SDC1-205ENST00000447124 CDH13P55290 713 aa19.17■□□□□ 0.66
SDC1-205ENST00000447124 HERVK_113P63132 956 aa19.17■□□□□ 0.66
SDC1-205ENST00000447124 ERVK-8P63133 956 aa19.17■□□□□ 0.66
SDC1-205ENST00000447124 PLIN5Q00G26 463 aa19.17■□□□□ 0.66
SDC1-205ENST00000447124 FOXO1Q12778 655 aa19.17■□□□□ 0.66
SDC1-205ENST00000447124 EMC4Q5J8M3 183 aa19.17■□□□□ 0.66
SDC1-205ENST00000447124 FRG2Q64ET8 278 aa19.17■□□□□ 0.66
SDC1-205ENST00000447124 ADGRD1Q6QNK2 874 aa19.17■□□□□ 0.66
SDC1-205ENST00000447124 CYP20A1Q6UW02 462 aa19.17■□□□□ 0.66
SDC1-205ENST00000447124 MILR1Q7Z6M3 343 aa19.17■□□□□ 0.66
SDC1-205ENST00000447124 CD163Q86VB7 1156 aa19.17■□□□□ 0.66
SDC1-205ENST00000447124 MCEMP1Q8IX19 187 aa19.17■□□□□ 0.66
SDC1-205ENST00000447124 MARVELD2Q8N4S9 558 aa19.17■□□□□ 0.66
SDC1-205ENST00000447124 GOLM1Q8NBJ4 401 aa19.17■□□□□ 0.66
SDC1-205ENST00000447124 OR4F6Q8NGB9 312 aa19.17■□□□□ 0.66
SDC1-205ENST00000447124 FBXL20Q96IG2 436 aa19.17■□□□□ 0.66
SDC1-205ENST00000447124 FRG2BQ96QU4 278 aa19.17■□□□□ 0.66
SDC1-205ENST00000447124 ERVK-6Q9BXR3 956 aa19.17■□□□□ 0.66
SDC1-205ENST00000447124 TTTY12Q9BZ98 90 aa19.17■□□□□ 0.66
SDC1-205ENST00000447124 MRPL46Q9H2W6 279 aaKnown RBP19.17■□□□□ 0.66
SDC1-205ENST00000447124 ZDHHC11Q9H8X9 412 aa19.17■□□□□ 0.66
SDC1-205ENST00000447124 CHST11Q9NPF2 352 aa19.17■□□□□ 0.66
SDC1-205ENST00000447124 FARSBQ9NSD9 589 aaKnown RBP19.17■□□□□ 0.66
SDC1-205ENST00000447124 ZNF225Q9UK10 706 aa19.17■□□□□ 0.66
SDC1-205ENST00000447124 NFU1Q9UMS0 254 aa19.17■□□□□ 0.66
SDC1-205ENST00000447124 ERVK-19Q9WJR5 959 aa19.17■□□□□ 0.66
SDC1-205ENST00000447124 SEMA3DO95025 777 aa19.16■□□□□ 0.66
SDC1-205ENST00000447124 CLDN14O95500 239 aa19.16■□□□□ 0.66
SDC1-205ENST00000447124 KLK1P06870 262 aa19.16■□□□□ 0.66
SDC1-205ENST00000447124 SNRPAP09012 282 aaKnown RBP19.16■□□□□ 0.66
SDC1-205ENST00000447124 NR2F6P10588 404 aa19.16■□□□□ 0.66
SDC1-205ENST00000447124 ARL1P40616 181 aaPredicted RBP19.16■□□□□ 0.66
SDC1-205ENST00000447124 KIR3DL1P43629 444 aa19.16■□□□□ 0.66
SDC1-205ENST00000447124 DNASE1L1P49184 302 aa19.16■□□□□ 0.66
SDC1-205ENST00000447124 SLC37A1P57057 533 aa19.16■□□□□ 0.66
SDC1-205ENST00000447124 PLGLB1Q02325 96 aa19.16■□□□□ 0.66
SDC1-205ENST00000447124 SPRED3Q2MJR0 410 aa19.16■□□□□ 0.66
SDC1-205ENST00000447124 SGO1Q5FBB7 561 aa19.16■□□□□ 0.66
SDC1-205ENST00000447124 TAOK1Q7L7X3 1001 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms