RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	DDX53	Q86TM3	631 aa	Known RBP	11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	SYNPO	Q8N3V7	929 aa		11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	ZNF557	Q8N988	423 aa	Predicted RBP	11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	CSGALNACT1	Q8TDX6	532 aa		11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	ZFPM2	Q8WW38	1151 aa		11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	C11orf54	Q9H0W9	315 aa	Predicted RBP	11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	MVB12B	Q9H7P6	319 aa		11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	ERVMER34-1	Q9H9K5	563 aa		11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	NLK	Q9UBE8	527 aa		11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	EXO1	Q9UQ84	846 aa	Known RBP	11.94	□□□□□ -0.5
DDR1-238	ENST00000446312		A0A1W2PPK0	400 aa		11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	ISPD	A4D126	451 aa		11.94	□□□□□ -0.5
DDR1-238	ENST00000446312		K7ESM1	405 aa		11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	TLR4	O00206	839 aa		11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	PLOD3	O60568	738 aa		11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	ZDHHC11B	P0C7U3	371 aa		11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	PSMB5	P28074	263 aa		11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	ATP6V1E1	P36543	226 aa		11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	HTR3A	P46098	478 aa		11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	MICA	Q29983	383 aa		11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	ZNF181	Q2M3W8	571 aa		11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	ZNF544	Q6NX49	715 aa		11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	MACC1	Q6ZN28	852 aa		11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	USP45	Q70EL2	814 aa		11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	GALNT11	Q8NCW6	608 aa		11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	OR6F1	Q8NGZ6	308 aa		11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	BBS10	Q8TAM1	723 aa		11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	ZNF566	Q969W8	418 aa		11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	C1QTNF7	Q9BXJ2	289 aa		11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	SLC12A9	Q9BXP2	914 aa		11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	SLC29A3	Q9BZD2	475 aa		11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	SLA2	Q9H6Q3	261 aa		11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	ACER3	Q9NUN7	267 aa		11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	ZNF224	Q9NZL3	707 aa		11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	STOX2	Q9P2F5	926 aa	Predicted RBP	11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	NUP50	Q9UKX7	468 aa		11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	PEX16	Q9Y5Y5	336 aa		11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	LOC102723532	A0A0G2JNH3	316 aa		11.94	□□□□□ -0.5
DDR1-238	ENST00000446312		H7C0S8	307 aa		11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	MYL12B	O14950	172 aa		11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	ERAL1	O75616	437 aa	Known RBP	11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	IL7	P13232	177 aa		11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	OPRD1	P41143	372 aa		11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	IL12RB1	P42701	662 aa		11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	RFX2	P48378	723 aa		11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	MAN2A2	P49641	1150 aa		11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	MPEG1	Q2M385	716 aa		11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	ASTL	Q6HA08	431 aa	Predicted RBP	11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	ATP6V1C2	Q8NEY4	427 aa		11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	SIPA1	Q96FS4	1042 aa		11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	OR2A14	Q96R47	310 aa		11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	MCCC1	Q96RQ3	725 aa	Predicted RBP	11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	TSSK6	Q9BXA6	273 aa		11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	OR2AG1	Q9H205	316 aa		11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	FAM83D	Q9H4H8	585 aa		11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	RUVBL1	Q9Y265	456 aa	Known RBP	11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	PCDHGB1	Q9Y5G3	927 aa		11.94	□□□□□ -0.5
DDR1-238	ENST00000446312		A0A1W2PRB8	838 aa		11.93	□□□□□ -0.5
DDR1-238	ENST00000446312	CS	O75390	466 aa	Known RBP	11.93	□□□□□ -0.5
DDR1-238	ENST00000446312	ZNF821	O75541	412 aa	Predicted RBP	11.93	□□□□□ -0.5
DDR1-238	ENST00000446312	FCER2	P06734	321 aa		11.93	□□□□□ -0.5
DDR1-238	ENST00000446312	SYP	P08247	313 aa		11.93	□□□□□ -0.5
DDR1-238	ENST00000446312	BUD31	P41223	144 aa	Predicted RBP	11.93	□□□□□ -0.5
DDR1-238	ENST00000446312	SLC16A1	P53985	500 aa		11.93	□□□□□ -0.5
DDR1-238	ENST00000446312	ZNF33B	Q06732	778 aa		11.93	□□□□□ -0.5
DDR1-238	ENST00000446312	TOR2A	Q5JU69	321 aa		11.93	□□□□□ -0.5
DDR1-238	ENST00000446312	KIAA1161	Q6NSJ0	714 aa		11.93	□□□□□ -0.5
DDR1-238	ENST00000446312	ARSK	Q6UWY0	536 aa		11.93	□□□□□ -0.5
DDR1-238	ENST00000446312	CASP12	Q6UXS9	341 aa		11.93	□□□□□ -0.5
DDR1-238	ENST00000446312	TPRG1	Q6ZUI0	275 aa		11.93	□□□□□ -0.5
DDR1-238	ENST00000446312	SLC30A8	Q8IWU4	369 aa		11.93	□□□□□ -0.5
DDR1-238	ENST00000446312	CHCHD4	Q8N4Q1	142 aa		11.93	□□□□□ -0.5
DDR1-238	ENST00000446312	SLC9A6	Q92581	669 aa		11.93	□□□□□ -0.5
DDR1-238	ENST00000446312	OPALIN	Q96PE5	141 aa		11.93	□□□□□ -0.5
DDR1-238	ENST00000446312	F2RL3	Q96RI0	385 aa		11.93	□□□□□ -0.5
DDR1-238	ENST00000446312	WAC	Q9BTA9	647 aa		11.93	□□□□□ -0.5
DDR1-238	ENST00000446312	HHATL	Q9HCP6	504 aa		11.93	□□□□□ -0.5
DDR1-238	ENST00000446312	SEMA3G	Q9NS98	782 aa		11.93	□□□□□ -0.5
DDR1-238	ENST00000446312	NTNG1	Q9Y2I2	539 aa		11.93	□□□□□ -0.5
DDR1-238	ENST00000446312	NLRC5	Q86WI3	1866 aa		11.93	□□□□□ -0.5
DDR1-238	ENST00000446312	SLC9A3R1	O14745	358 aa	Predicted RBP	11.93	□□□□□ -0.5
DDR1-238	ENST00000446312	SLITRK5	O94991	958 aa		11.93	□□□□□ -0.5
DDR1-238	ENST00000446312	EOMES	O95936	686 aa		11.93	□□□□□ -0.5
DDR1-238	ENST00000446312	HBQ1	P09105	142 aa		11.93	□□□□□ -0.5
DDR1-238	ENST00000446312	DDC	P20711	480 aa		11.93	□□□□□ -0.5
DDR1-238	ENST00000446312	RFX3	P48380	749 aa		11.93	□□□□□ -0.5
DDR1-238	ENST00000446312	ETV1	P50549	477 aa		11.93	□□□□□ -0.5
DDR1-238	ENST00000446312	CRISP1	P54107	249 aa		11.93	□□□□□ -0.5
DDR1-238	ENST00000446312	AP1S1	P61966	158 aa		11.93	□□□□□ -0.5
DDR1-238	ENST00000446312	P2RY14	Q15391	338 aa		11.93	□□□□□ -0.5
DDR1-238	ENST00000446312	SPHAR	Q15513	63 aa		11.93	□□□□□ -0.5
DDR1-238	ENST00000446312	TBCE	Q15813	527 aa	Predicted RBP	11.93	□□□□□ -0.5
DDR1-238	ENST00000446312	ZNF57	Q68EA5	555 aa	Predicted RBP	11.93	□□□□□ -0.5
DDR1-238	ENST00000446312	FRMPD2B	Q6IN97	320 aa		11.93	□□□□□ -0.5
DDR1-238	ENST00000446312	LRRTM4	Q86VH4	590 aa		11.93	□□□□□ -0.5
DDR1-238	ENST00000446312	ENKUR	Q8TC29	256 aa		11.93	□□□□□ -0.5
DDR1-238	ENST00000446312	ADAMTS19	Q8TE59	1207 aa		11.93	□□□□□ -0.5
DDR1-238	ENST00000446312	ASB15	Q8WXK1	588 aa		11.93	□□□□□ -0.5
DDR1-238	ENST00000446312	ASB12	Q8WXK4	309 aa		11.93	□□□□□ -0.5
DDR1-238	ENST00000446312	CLP1	Q92989	425 aa	Known RBP	11.93	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms