RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 CBX1P83916 185 aa16.16■□□□□ 0.18
LIME1-202ENST00000444951 ACTN3Q08043 901 aaPredicted RBP16.16■□□□□ 0.18
LIME1-202ENST00000444951 CDC20Q12834 499 aa16.16■□□□□ 0.18
LIME1-202ENST00000444951 OR52E8Q6IFG1 317 aa16.16■□□□□ 0.18
LIME1-202ENST00000444951 IKBIPQ70UQ0 350 aa16.16■□□□□ 0.18
LIME1-202ENST00000444951 PIGWQ7Z7B1 504 aa16.16■□□□□ 0.18
LIME1-202ENST00000444951 TICAM1Q8IUC6 712 aa16.16■□□□□ 0.18
LIME1-202ENST00000444951 ZNF595Q8IYB9 648 aa16.16■□□□□ 0.18
LIME1-202ENST00000444951 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.16■□□□□ 0.18
LIME1-202ENST00000444951 TSLPQ969D9 159 aa16.16■□□□□ 0.18
LIME1-202ENST00000444951 PTCHD1Q96NR3 888 aa16.16■□□□□ 0.18
LIME1-202ENST00000444951 SPSB2Q99619 263 aa16.16■□□□□ 0.18
LIME1-202ENST00000444951 TGIF2Q9GZN2 237 aa16.16■□□□□ 0.18
LIME1-202ENST00000444951 VN1R1Q9GZP7 353 aa16.16■□□□□ 0.18
LIME1-202ENST00000444951 SLC26A1Q9H2B4 701 aa16.16■□□□□ 0.18
LIME1-202ENST00000444951 ADNPQ9H2P0 1102 aa16.16■□□□□ 0.18
LIME1-202ENST00000444951 WDR54Q9H977 334 aa16.16■□□□□ 0.18
LIME1-202ENST00000444951 PADI2Q9Y2J8 665 aa16.16■□□□□ 0.18
LIME1-202ENST00000444951 COPG1Q9Y678 874 aaKnown RBP16.16■□□□□ 0.18
LIME1-202ENST00000444951 DOPEY2Q9Y3R5 2298 aa16.15■□□□□ 0.18
LIME1-202ENST00000444951 VSTM2BA6NLU5 285 aa16.15■□□□□ 0.18
LIME1-202ENST00000444951 IDSB3KWA1 339 aa16.15■□□□□ 0.18
LIME1-202ENST00000444951 FGF17O60258 216 aa16.15■□□□□ 0.18
LIME1-202ENST00000444951 COX7A2P14406 83 aa16.15■□□□□ 0.18
LIME1-202ENST00000444951 DRD2P14416 443 aa16.15■□□□□ 0.18
LIME1-202ENST00000444951 DDCP20711 480 aa16.15■□□□□ 0.18
LIME1-202ENST00000444951 GSTM5P46439 218 aa16.15■□□□□ 0.18
LIME1-202ENST00000444951 EMP2P54851 167 aa16.15■□□□□ 0.18
LIME1-202ENST00000444951 CLDN8P56748 225 aa16.15■□□□□ 0.18
LIME1-202ENST00000444951 FOLH1Q04609 750 aa16.15■□□□□ 0.18
LIME1-202ENST00000444951 TLE1Q04724 770 aa16.15■□□□□ 0.18
LIME1-202ENST00000444951 STX4Q12846 297 aa16.15■□□□□ 0.18
LIME1-202ENST00000444951 GSTA3Q16772 222 aa16.15■□□□□ 0.18
LIME1-202ENST00000444951 ZNF750Q32MQ0 723 aa16.15■□□□□ 0.18
LIME1-202ENST00000444951 PGS1Q32NB8 556 aa16.15■□□□□ 0.18
LIME1-202ENST00000444951 COLEC12Q5KU26 742 aa16.15■□□□□ 0.18
LIME1-202ENST00000444951 NAV2Q8IVL1 2488 aa16.15■□□□□ 0.18
LIME1-202ENST00000444951 MIER2Q8N344 545 aa16.15■□□□□ 0.18
LIME1-202ENST00000444951 OR7A2PQ8NGA2 310 aa16.15■□□□□ 0.18
LIME1-202ENST00000444951 STON2Q8WXE9 905 aa16.15■□□□□ 0.18
LIME1-202ENST00000444951 STARD8Q92502 1023 aa16.15■□□□□ 0.18
LIME1-202ENST00000444951 TANKQ92844 425 aa16.15■□□□□ 0.18
LIME1-202ENST00000444951 PPCDCQ96CD2 204 aa16.15■□□□□ 0.18
LIME1-202ENST00000444951 KLHL29Q96CT2 875 aa16.15■□□□□ 0.18
LIME1-202ENST00000444951 ACTL8Q9H568 366 aa16.15■□□□□ 0.18
LIME1-202ENST00000444951 REEP4Q9H6H4 257 aa16.15■□□□□ 0.18
LIME1-202ENST00000444951 NECTIN3Q9NQS3 549 aa16.15■□□□□ 0.18
LIME1-202ENST00000444951 SH3BP4Q9P0V3 963 aa16.15■□□□□ 0.18
LIME1-202ENST00000444951 NXT1Q9UKK6 140 aaKnown RBP16.15■□□□□ 0.18
LIME1-202ENST00000444951 UTS2RQ9UKP6 389 aa16.15■□□□□ 0.18
LIME1-202ENST00000444951 TCFL5Q9UL49 500 aa16.15■□□□□ 0.18
LIME1-202ENST00000444951 EXO1Q9UQ84 846 aaKnown RBP16.15■□□□□ 0.18
LIME1-202ENST00000444951 NUP210LQ5VU65 1888 aa16.14■□□□□ 0.17
LIME1-202ENST00000444951 C21orf140B9A014 251 aa16.14■□□□□ 0.17
LIME1-202ENST00000444951 NDUFAB1O14561 156 aa16.14■□□□□ 0.17
LIME1-202ENST00000444951 SCAMP2O15127 329 aaKnown RBP16.14■□□□□ 0.17
LIME1-202ENST00000444951 CTNSO60931 367 aa16.14■□□□□ 0.17
LIME1-202ENST00000444951 KLF7O75840 302 aaPredicted RBP16.14■□□□□ 0.17
LIME1-202ENST00000444951 CD63P08962 238 aa16.14■□□□□ 0.17
LIME1-202ENST00000444951 FURINP09958 794 aa16.14■□□□□ 0.17
LIME1-202ENST00000444951 PRPS1L1P21108 318 aa16.14■□□□□ 0.17
LIME1-202ENST00000444951 PIK3R1P27986 724 aa16.14■□□□□ 0.17
LIME1-202ENST00000444951 PTPN4P29074 926 aa16.14■□□□□ 0.17
LIME1-202ENST00000444951 OTX2P32243 289 aa16.14■□□□□ 0.17
LIME1-202ENST00000444951 EFNA3P52797 238 aa16.14■□□□□ 0.17
LIME1-202ENST00000444951 RHAGQ02094 409 aa16.14■□□□□ 0.17
LIME1-202ENST00000444951 UBAP2LQ14157 1087 aaKnown RBP16.14■□□□□ 0.17
LIME1-202ENST00000444951 NSDHLQ15738 373 aa16.14■□□□□ 0.17
LIME1-202ENST00000444951 PRSS53Q2L4Q9 553 aa16.14■□□□□ 0.17
LIME1-202ENST00000444951 DEFB109BQ30KR1 87 aa16.14■□□□□ 0.17
LIME1-202ENST00000444951 PDCD4Q53EL6 469 aaKnown RBP16.14■□□□□ 0.17
LIME1-202ENST00000444951 GKAP1Q5VSY0 366 aaPredicted RBP16.14■□□□□ 0.17
LIME1-202ENST00000444951 SLC48A1Q6P1K1 146 aa16.14■□□□□ 0.17
LIME1-202ENST00000444951 PAOXQ6QHF9 649 aa16.14■□□□□ 0.17
LIME1-202ENST00000444951 FAM9CQ8IZT9 166 aa16.14■□□□□ 0.17
LIME1-202ENST00000444951 OR4K14Q8NGD5 310 aa16.14■□□□□ 0.17
LIME1-202ENST00000444951 OR9I1Q8NGQ6 314 aa16.14■□□□□ 0.17
LIME1-202ENST00000444951 OR2Y1Q8NGV0 311 aa16.14■□□□□ 0.17
LIME1-202ENST00000444951 DNAJB14Q8TBM8 379 aa16.14■□□□□ 0.17
LIME1-202ENST00000444951 BCAS4Q8TDM0 211 aa16.14■□□□□ 0.17
LIME1-202ENST00000444951 TEX37Q96LM6 180 aa16.14■□□□□ 0.17
LIME1-202ENST00000444951 ZBTB18Q99592 522 aa16.14■□□□□ 0.17
LIME1-202ENST00000444951 GPR87Q9BY21 358 aa16.14■□□□□ 0.17
LIME1-202ENST00000444951 BRINP2Q9C0B6 783 aa16.14■□□□□ 0.17
LIME1-202ENST00000444951 PRDM9Q9NQV7 894 aa16.14■□□□□ 0.17
LIME1-202ENST00000444951 ZNF71Q9NQZ8 489 aaPredicted RBP16.14■□□□□ 0.17
LIME1-202ENST00000444951 KCND3Q9UK17 655 aa16.14■□□□□ 0.17
LIME1-202ENST00000444951 WBP11Q9Y2W2 641 aaKnown RBP16.14■□□□□ 0.17
LIME1-202ENST00000444951 ARL2BPQ9Y2Y0 163 aa16.14■□□□□ 0.17
LIME1-202ENST00000444951 A0A1W2PS29 197 aa16.13■□□□□ 0.17
LIME1-202ENST00000444951 GABRR3A8MPY1 467 aa16.13■□□□□ 0.17
LIME1-202ENST00000444951 A8MUA0 341 aa16.13■□□□□ 0.17
LIME1-202ENST00000444951 TGFBR3LH3BV60 316 aa16.13■□□□□ 0.17
LIME1-202ENST00000444951 SLC22A3O75751 556 aa16.13■□□□□ 0.17
LIME1-202ENST00000444951 RECKO95980 971 aa16.13■□□□□ 0.17
LIME1-202ENST00000444951 UMODP07911 640 aa16.13■□□□□ 0.17
LIME1-202ENST00000444951 EFNA1P20827 205 aaPredicted RBP16.13■□□□□ 0.17
LIME1-202ENST00000444951 GPX3P22352 226 aa16.13■□□□□ 0.17
LIME1-202ENST00000444951 PTGER1P34995 402 aa16.13■□□□□ 0.17
LIME1-202ENST00000444951 FEN1P39748 380 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms