RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 PIK3R1P27986 724 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 ARL1P40616 181 aaPredicted RBP7.2□□□□□ -1.26
CD44-211ENST00000442151 PGGT1BP53609 377 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 NRG3P56975 720 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 IGLV3-21P80748 117 aaPredicted RBP7.2□□□□□ -1.26
CD44-211ENST00000442151 IFT88Q13099 833 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 SETDB1Q15047 1291 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 HYAL4Q2M3T9 481 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 C18orf21Q32NC0 220 aaPredicted RBP7.2□□□□□ -1.26
CD44-211ENST00000442151 TMEM198Q66K66 360 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 TTC19Q6DKK2 380 aaPredicted RBP7.2□□□□□ -1.26
CD44-211ENST00000442151 C8orf74Q6P047 294 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 SCIMPQ6UWF3 145 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 MEX3BQ6ZN04 569 aaKnown RBP7.2□□□□□ -1.26
CD44-211ENST00000442151 RNF111Q6ZNA4 994 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 ZNF572Q7Z3I7 529 aaPredicted RBP7.2□□□□□ -1.26
CD44-211ENST00000442151 CD163Q86VB7 1156 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 ZNF227Q86WZ6 799 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 LIX1Q8N485 282 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 SPATA6LQ8N4H0 392 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 OR5M3Q8NGP4 307 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 RIT1Q92963 219 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 TP53INP1Q96A56 240 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 NXNL1Q96CM4 212 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 SENP5Q96HI0 755 aaPredicted RBP7.2□□□□□ -1.26
CD44-211ENST00000442151 FBXL20Q96IG2 436 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 LURAP1Q96LR2 239 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 ATOH8Q96SQ7 321 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 MAPKAP1Q9BPZ7 522 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 DEFB127Q9H1M4 99 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 SNX15Q9NRS6 342 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 GRHL1Q9NZI5 618 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 ADAM29Q9UKF5 820 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 ACAD8Q9UKU7 415 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 USP9XQ93008 2570 aaPredicted RBP7.2□□□□□ -1.26
CD44-211ENST00000442151 SVILO95425 2214 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 DIDO1Q9BTC0 2240 aaKnown RBP7.2□□□□□ -1.26
CD44-211ENST00000442151 MYO9AB2RTY4 2548 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 A0A096LPK6 155 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 CCDC151A5D8V7 595 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 UBXN8O00124 270 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 TP73O15350 636 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 PROM1O43490 865 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 SNX4O95219 450 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 IGHG3P01860 377 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 SLC35E2BP0CK96 405 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 SLC35E2P0CK97 266 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 ACVR2AP27037 513 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 DEKP35659 375 aaKnown RBP7.2□□□□□ -1.26
CD44-211ENST00000442151 SOX3P41225 446 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 CCNG1P51959 295 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 GPX6P59796 221 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 EEF1A1P68104 462 aaKnown RBP7.2□□□□□ -1.26
CD44-211ENST00000442151 PSPHP78330 225 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 TNFRSF17Q02223 184 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 GUCY2DQ02846 1103 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 C2orf54Q08AI8 447 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 DDX39BQ13838 428 aaKnown RBP7.2□□□□□ -1.26
CD44-211ENST00000442151 GTF2H2Q13888 395 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 UAP1Q16222 522 aaPredicted RBP7.2□□□□□ -1.26
CD44-211ENST00000442151 PFKFB4Q16877 469 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 WHAMMP3Q1A5X7 153 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 SPRED3Q2MJR0 410 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 GXYLT1Q4G148 440 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 GLE1Q53GS7 698 aaKnown RBP7.2□□□□□ -1.26
CD44-211ENST00000442151 CMPK2Q5EBM0 449 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 MROH9Q5TGP6 573 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 EEF1A1P5Q5VTE0 462 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 GTF2H2CQ6P1K8 395 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 VN1R5Q7Z5H4 357 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 NUDT13Q86X67 352 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 OR7G1Q8NGA0 311 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 OR10Q1Q8NGQ4 319 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 HUS1BQ8NHY5 278 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 FBXO25Q8TCJ0 367 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 ANKRD9Q96BM1 317 aaPredicted RBP7.2□□□□□ -1.26
CD44-211ENST00000442151 SCYL1Q96KG9 808 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 SMC6Q96SB8 1091 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 SECISBP2Q96T21 854 aaKnown RBP7.2□□□□□ -1.26
CD44-211ENST00000442151 AICDAQ9GZX7 198 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 ENKD1Q9H0I2 346 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 OR51B5Q9H339 312 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 DDX31Q9H8H2 851 aaKnown RBP7.2□□□□□ -1.26
CD44-211ENST00000442151 IPPKQ9H8X2 491 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 ZDHHC11Q9H8X9 412 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 DMRT3Q9NQL9 472 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 STK38LQ9Y2H1 464 aa7.2□□□□□ -1.26
CD44-211ENST00000442151 DOPEY1Q5JWR5 2465 aa7.19□□□□□ -1.26
CD44-211ENST00000442151 TRGV5A0A0B4J1U4 118 aa7.19□□□□□ -1.26
CD44-211ENST00000442151 ANKRD33BA6NCL7 494 aa7.19□□□□□ -1.26
CD44-211ENST00000442151 GOLGA6L10A6NI86 522 aa7.19□□□□□ -1.26
CD44-211ENST00000442151 HSPB2A8KAH6 182 aa7.19□□□□□ -1.26
CD44-211ENST00000442151 AHRRA9YTQ3 701 aa7.19□□□□□ -1.26
CD44-211ENST00000442151 STX16-NPEPL1H3BU86 382 aa7.19□□□□□ -1.26
CD44-211ENST00000442151 STX16O14662 325 aa7.19□□□□□ -1.26
CD44-211ENST00000442151 KLK8O60259 260 aa7.19□□□□□ -1.26
CD44-211ENST00000442151 LDB3O75112 727 aa7.19□□□□□ -1.26
CD44-211ENST00000442151 BCAS2O75934 225 aaPredicted RBP7.19□□□□□ -1.26
CD44-211ENST00000442151 PDE9AO76083 593 aa7.19□□□□□ -1.26
CD44-211ENST00000442151 OR6B1O95007 311 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms