RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 ST13P4Q8IZP2 240 aaPredicted RBP18.41■□□□□ 0.54
SHROOM1-204ENST00000440118 OR4F6Q8NGB9 312 aa18.41■□□□□ 0.54
SHROOM1-204ENST00000440118 ZNF721Q8TF20 911 aa18.41■□□□□ 0.54
SHROOM1-204ENST00000440118 ITLN2Q8WWU7 325 aaPredicted RBP18.41■□□□□ 0.54
SHROOM1-204ENST00000440118 SENP5Q96HI0 755 aaPredicted RBP18.41■□□□□ 0.54
SHROOM1-204ENST00000440118 ERVK-6Q9BXR3 956 aa18.41■□□□□ 0.54
SHROOM1-204ENST00000440118 ZNF717Q9BY31 904 aaPredicted RBP18.41■□□□□ 0.54
SHROOM1-204ENST00000440118 SNX6Q9UNH7 406 aa18.41■□□□□ 0.54
SHROOM1-204ENST00000440118 SLC12A4Q9UP95 1085 aa18.41■□□□□ 0.54
SHROOM1-204ENST00000440118 ERVK-19Q9WJR5 959 aa18.41■□□□□ 0.54
SHROOM1-204ENST00000440118 A0A1W2PR48 441 aa18.4■□□□□ 0.54
SHROOM1-204ENST00000440118 TMEM200CA6NKL6 621 aa18.4■□□□□ 0.54
SHROOM1-204ENST00000440118 G3V3Y1 287 aa18.4■□□□□ 0.54
SHROOM1-204ENST00000440118 GPR75O95800 540 aa18.4■□□□□ 0.54
SHROOM1-204ENST00000440118 TPOP07202 933 aa18.4■□□□□ 0.54
SHROOM1-204ENST00000440118 PIK3R1P27986 724 aa18.4■□□□□ 0.54
SHROOM1-204ENST00000440118 ASPHQ12797 758 aa18.4■□□□□ 0.54
SHROOM1-204ENST00000440118 ZNF267Q14586 743 aaPredicted RBP18.4■□□□□ 0.54
SHROOM1-204ENST00000440118 GGTA1PQ4G0N0 100 aa18.4■□□□□ 0.54
SHROOM1-204ENST00000440118 RNF111Q6ZNA4 994 aa18.4■□□□□ 0.54
SHROOM1-204ENST00000440118 GK5Q6ZS86 529 aa18.4■□□□□ 0.54
SHROOM1-204ENST00000440118 SLC34A3Q8N130 599 aa18.4■□□□□ 0.54
SHROOM1-204ENST00000440118 DOK4Q8TEW6 326 aa18.4■□□□□ 0.54
SHROOM1-204ENST00000440118 SELENOMQ8WWX9 145 aa18.4■□□□□ 0.54
SHROOM1-204ENST00000440118 RIT1Q92963 219 aa18.4■□□□□ 0.54
SHROOM1-204ENST00000440118 FBXL20Q96IG2 436 aa18.4■□□□□ 0.54
SHROOM1-204ENST00000440118 PSD3Q9NYI0 1048 aa18.4■□□□□ 0.54
SHROOM1-204ENST00000440118 PSMC3IPQ9P2W1 217 aaPredicted RBP18.4■□□□□ 0.54
SHROOM1-204ENST00000440118 PPT2Q9UMR5 302 aa18.4■□□□□ 0.54
SHROOM1-204ENST00000440118 ASB4Q9Y574 426 aa18.4■□□□□ 0.54
SHROOM1-204ENST00000440118 FAM166BA8MTA8 275 aa18.39■□□□□ 0.53
SHROOM1-204ENST00000440118 ZNHIT1O43257 154 aa18.39■□□□□ 0.53
SHROOM1-204ENST00000440118 SUPT7LO94864 414 aa18.39■□□□□ 0.53
SHROOM1-204ENST00000440118 P04436 131 aa18.39■□□□□ 0.53
SHROOM1-204ENST00000440118 KLK1P06870 262 aa18.39■□□□□ 0.53
SHROOM1-204ENST00000440118 TSPAN8P19075 237 aa18.39■□□□□ 0.53
SHROOM1-204ENST00000440118 PTGS2P35354 604 aa18.39■□□□□ 0.53
SHROOM1-204ENST00000440118 CDH13P55290 713 aa18.39■□□□□ 0.53
SHROOM1-204ENST00000440118 ZNF750Q32MQ0 723 aa18.39■□□□□ 0.53
SHROOM1-204ENST00000440118 CCNYL2Q5T2Q4 361 aa18.39■□□□□ 0.53
SHROOM1-204ENST00000440118 PAOXQ6QHF9 649 aa18.39■□□□□ 0.53
SHROOM1-204ENST00000440118 ADGRD1Q6QNK2 874 aa18.39■□□□□ 0.53
SHROOM1-204ENST00000440118 BNC2Q6ZN30 1099 aaPredicted RBP18.39■□□□□ 0.53
SHROOM1-204ENST00000440118 FAM47EQ6ZV65 393 aa18.39■□□□□ 0.53
SHROOM1-204ENST00000440118 RPS27LQ71UM5 84 aaKnown RBP18.39■□□□□ 0.53
SHROOM1-204ENST00000440118 ZFP62Q8NB50 900 aaPredicted RBP18.39■□□□□ 0.53
SHROOM1-204ENST00000440118 NUBPLQ8TB37 319 aa18.39■□□□□ 0.53
SHROOM1-204ENST00000440118 TRPC4APQ8TEL6 797 aa18.39■□□□□ 0.53
SHROOM1-204ENST00000440118 AGAP11Q8TF27 550 aa18.39■□□□□ 0.53
SHROOM1-204ENST00000440118 ZNF483Q8TF39 744 aaPredicted RBP18.39■□□□□ 0.53
SHROOM1-204ENST00000440118 SGCZQ96LD1 299 aa18.39■□□□□ 0.53
SHROOM1-204ENST00000440118 MRPL1Q9BYD6 325 aaKnown RBP18.39■□□□□ 0.53
SHROOM1-204ENST00000440118 ZBTB26Q9HCK0 441 aa18.39■□□□□ 0.53
SHROOM1-204ENST00000440118 SACM1LQ9NTJ5 587 aa18.39■□□□□ 0.53
SHROOM1-204ENST00000440118 NMRK1Q9NWW6 199 aa18.39■□□□□ 0.53
SHROOM1-204ENST00000440118 ZNF835Q9Y2P0 537 aa18.39■□□□□ 0.53
SHROOM1-204ENST00000440118 DNAJC13O75165 2243 aa18.39■□□□□ 0.53
SHROOM1-204ENST00000440118 CACNA1CQ13936 2221 aa18.39■□□□□ 0.53
SHROOM1-204ENST00000440118 ZNF407Q9C0G0 2248 aa18.39■□□□□ 0.53
SHROOM1-204ENST00000440118 ITPR2Q14571 2701 aa18.39■□□□□ 0.53
SHROOM1-204ENST00000440118 A0A1B0GTH9 108 aa18.38■□□□□ 0.53
SHROOM1-204ENST00000440118 GOLGA8RI6L899 631 aa18.38■□□□□ 0.53
SHROOM1-204ENST00000440118 GUCY1B2O75343 617 aa18.38■□□□□ 0.53
SHROOM1-204ENST00000440118 MAPK12P53778 367 aa18.38■□□□□ 0.53
SHROOM1-204ENST00000440118 PPIAP62937 165 aaKnown RBP18.38■□□□□ 0.53
SHROOM1-204ENST00000440118 ART3Q13508 389 aa18.38■□□□□ 0.53
SHROOM1-204ENST00000440118 MRM1Q6IN84 353 aaKnown RBP18.38■□□□□ 0.53
SHROOM1-204ENST00000440118 Q6ZPB1 254 aaPredicted RBP18.38■□□□□ 0.53
SHROOM1-204ENST00000440118 LCA5Q86VQ0 697 aa18.38■□□□□ 0.53
SHROOM1-204ENST00000440118 SLC22A16Q86VW1 577 aa18.38■□□□□ 0.53
SHROOM1-204ENST00000440118 C9orf40Q8IXQ3 194 aa18.38■□□□□ 0.53
SHROOM1-204ENST00000440118 GSPT2Q8IYD1 628 aaKnown RBP18.38■□□□□ 0.53
SHROOM1-204ENST00000440118 GOLM1Q8NBJ4 401 aa18.38■□□□□ 0.53
SHROOM1-204ENST00000440118 OR2M7Q8NG81 312 aa18.38■□□□□ 0.53
SHROOM1-204ENST00000440118 FAM173AQ9BQD7 235 aa18.38■□□□□ 0.53
SHROOM1-204ENST00000440118 RUBCNLQ9H714 662 aa18.38■□□□□ 0.53
SHROOM1-204ENST00000440118 TEX10Q9NXF1 929 aaPredicted RBP18.38■□□□□ 0.53
SHROOM1-204ENST00000440118 TBK1Q9UHD2 729 aa18.38■□□□□ 0.53
SHROOM1-204ENST00000440118 ENTPD4Q9Y227 616 aa18.38■□□□□ 0.53
SHROOM1-204ENST00000440118 MEMO1Q9Y316 297 aa18.38■□□□□ 0.53
SHROOM1-204ENST00000440118 CELSR2Q9HCU4 2923 aa18.37■□□□□ 0.53
SHROOM1-204ENST00000440118 NCOA6Q14686 2063 aaPredicted RBP18.37■□□□□ 0.53
SHROOM1-204ENST00000440118 HRKO00198 91 aa18.37■□□□□ 0.53
SHROOM1-204ENST00000440118 HNRNPRO43390 633 aaKnown RBP18.37■□□□□ 0.53
SHROOM1-204ENST00000440118 PDE9AO76083 593 aa18.37■□□□□ 0.53
SHROOM1-204ENST00000440118 CLCQ05315 142 aa18.37■□□□□ 0.53
SHROOM1-204ENST00000440118 SLC29A2Q14542 456 aa18.37■□□□□ 0.53
SHROOM1-204ENST00000440118 MPEG1Q2M385 716 aa18.37■□□□□ 0.53
SHROOM1-204ENST00000440118 SPRED3Q2MJR0 410 aa18.37■□□□□ 0.53
SHROOM1-204ENST00000440118 HLA-DQA1Q5Y7H0 255 aa18.37■□□□□ 0.53
SHROOM1-204ENST00000440118 LETMD1Q6P1Q0 360 aa18.37■□□□□ 0.53
SHROOM1-204ENST00000440118 ARHGAP11AQ6P4F7 1023 aa18.37■□□□□ 0.53
SHROOM1-204ENST00000440118 XKRXQ6PP77 449 aa18.37■□□□□ 0.53
SHROOM1-204ENST00000440118 C3P1Q6ZMU1 363 aa18.37■□□□□ 0.53
SHROOM1-204ENST00000440118 TIFABQ6ZNK6 161 aa18.37■□□□□ 0.53
SHROOM1-204ENST00000440118 DGAT2L6Q6ZPD8 337 aa18.37■□□□□ 0.53
SHROOM1-204ENST00000440118 CD163Q86VB7 1156 aa18.37■□□□□ 0.53
SHROOM1-204ENST00000440118 GALNT12Q8IXK2 581 aa18.37■□□□□ 0.53
SHROOM1-204ENST00000440118 CNPY4Q8N129 248 aa18.37■□□□□ 0.53
SHROOM1-204ENST00000440118 C16orf52Q8NHV5 167 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms