RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 PCBP1Q15365 356 aaKnown RBP eCLIP12.74□□□□□ -0.37
ACTN1-204ENST00000438964 GPR155Q7Z3F1 870 aa12.74□□□□□ -0.37
ACTN1-204ENST00000438964 OR11H7Q8NGC8 314 aa12.74□□□□□ -0.37
ACTN1-204ENST00000438964 OR52I1Q8NGK6 324 aa12.74□□□□□ -0.37
ACTN1-204ENST00000438964 DNAJB8Q8NHS0 232 aa12.74□□□□□ -0.37
ACTN1-204ENST00000438964 OR51B5Q9H339 312 aa12.74□□□□□ -0.37
ACTN1-204ENST00000438964 FAM120CQ9NX05 1096 aaKnown RBP12.74□□□□□ -0.37
ACTN1-204ENST00000438964 PPIEQ9UNP9 301 aaKnown RBP12.74□□□□□ -0.37
ACTN1-204ENST00000438964 MRPS7Q9Y2R9 242 aaKnown RBP12.74□□□□□ -0.37
ACTN1-204ENST00000438964 PCDHB7Q9Y5E2 793 aa12.74□□□□□ -0.37
ACTN1-204ENST00000438964 BCHEP06276 602 aa12.73□□□□□ -0.37
ACTN1-204ENST00000438964 CELP19835 753 aa12.73□□□□□ -0.37
ACTN1-204ENST00000438964 PCGF2P35227 344 aa12.73□□□□□ -0.37
ACTN1-204ENST00000438964 DSC1Q08554 894 aa12.73□□□□□ -0.37
ACTN1-204ENST00000438964 HEPACAMQ14CZ8 416 aa12.73□□□□□ -0.37
ACTN1-204ENST00000438964 ZNF791Q3KP31 576 aaPredicted RBP12.73□□□□□ -0.37
ACTN1-204ENST00000438964 CXorf57Q6NSI4 855 aaKnown RBP12.73□□□□□ -0.37
ACTN1-204ENST00000438964 ACSM5Q6NUN0 579 aa12.73□□□□□ -0.37
ACTN1-204ENST00000438964 NCEH1Q6PIU2 408 aa12.73□□□□□ -0.37
ACTN1-204ENST00000438964 KIAA1324Q6UXG2 1013 aaKnown RBP12.73□□□□□ -0.37
ACTN1-204ENST00000438964 ESX1Q8N693 406 aa12.73□□□□□ -0.37
ACTN1-204ENST00000438964 ZNF655Q8N720 491 aaPredicted RBP12.73□□□□□ -0.37
ACTN1-204ENST00000438964 GALNT6Q8NCL4 622 aa12.73□□□□□ -0.37
ACTN1-204ENST00000438964 MYLIPQ8WY64 445 aa12.73□□□□□ -0.37
ACTN1-204ENST00000438964 ST8SIA2Q92186 375 aa12.73□□□□□ -0.37
ACTN1-204ENST00000438964 PIGKQ92643 395 aa12.73□□□□□ -0.37
ACTN1-204ENST00000438964 WDFY2Q96P53 400 aa12.73□□□□□ -0.37
ACTN1-204ENST00000438964 MRPL9Q9BYD2 267 aaKnown RBP12.73□□□□□ -0.37
ACTN1-204ENST00000438964 MED28Q9H204 178 aa12.73□□□□□ -0.37
ACTN1-204ENST00000438964 SLC25A19Q9HC21 320 aa12.73□□□□□ -0.37
ACTN1-204ENST00000438964 DNAJC11Q9NVH1 559 aa12.73□□□□□ -0.37
ACTN1-204ENST00000438964 TRPM5Q9NZQ8 1165 aa12.73□□□□□ -0.37
ACTN1-204ENST00000438964 SPEGQ15772 3267 aa12.73□□□□□ -0.37
ACTN1-204ENST00000438964 SHOXO15266 292 aa12.73□□□□□ -0.37
ACTN1-204ENST00000438964 ORC5O43913 435 aa12.73□□□□□ -0.37
ACTN1-204ENST00000438964 CELF2O95319 508 aaKnown RBP12.73□□□□□ -0.37
ACTN1-204ENST00000438964 TFPIP10646 304 aa12.73□□□□□ -0.37
ACTN1-204ENST00000438964 PBLDP30039 288 aaPredicted RBP12.73□□□□□ -0.37
ACTN1-204ENST00000438964 RHAGQ02094 409 aa12.73□□□□□ -0.37
ACTN1-204ENST00000438964 KCNA10Q16322 511 aa12.73□□□□□ -0.37
ACTN1-204ENST00000438964 ZSWIM7Q19AV6 140 aa12.73□□□□□ -0.37
ACTN1-204ENST00000438964 KLHL22Q53GT1 634 aa12.73□□□□□ -0.37
ACTN1-204ENST00000438964 IDNKQ5T6J7 187 aa12.73□□□□□ -0.37
ACTN1-204ENST00000438964 MZT2BQ6NZ67 158 aa12.73□□□□□ -0.37
ACTN1-204ENST00000438964 ZNF730Q6ZMV8 503 aa12.73□□□□□ -0.37
ACTN1-204ENST00000438964 FATE1Q969F0 183 aa12.73□□□□□ -0.37
ACTN1-204ENST00000438964 SLC7A5P2Q9GIP4 190 aa12.73□□□□□ -0.37
ACTN1-204ENST00000438964 CNOT2Q9NZN8 540 aaKnown RBP12.73□□□□□ -0.37
ACTN1-204ENST00000438964 ZNF624Q9P2J8 865 aaPredicted RBP12.73□□□□□ -0.37
ACTN1-204ENST00000438964 EIF3KQ9UBQ5 218 aaKnown RBP12.73□□□□□ -0.37
ACTN1-204ENST00000438964 OTOFQ9HC10 1997 aa12.73□□□□□ -0.37
ACTN1-204ENST00000438964 CASP8AP2Q9UKL3 1982 aa12.73□□□□□ -0.37
ACTN1-204ENST00000438964 PIPSLA2A3N6 862 aa12.72□□□□□ -0.37
ACTN1-204ENST00000438964 NPIPB15A6NHN6 443 aaPredicted RBP12.72□□□□□ -0.37
ACTN1-204ENST00000438964 TRIM77I1YAP6 450 aa12.72□□□□□ -0.37
ACTN1-204ENST00000438964 NME6O75414 186 aaPredicted RBP12.72□□□□□ -0.37
ACTN1-204ENST00000438964 IFNW1P05000 195 aa12.72□□□□□ -0.37
ACTN1-204ENST00000438964 PRKACAP17612 351 aa12.72□□□□□ -0.37
ACTN1-204ENST00000438964 PREPP48147 710 aa12.72□□□□□ -0.37
ACTN1-204ENST00000438964 STK19P49842 368 aaPredicted RBP12.72□□□□□ -0.37
ACTN1-204ENST00000438964 PFN3P60673 137 aa12.72□□□□□ -0.37
ACTN1-204ENST00000438964 ZNF628Q5EBL2 1059 aa12.72□□□□□ -0.37
ACTN1-204ENST00000438964 FAM27D1Q5T7N8 215 aa12.72□□□□□ -0.37
ACTN1-204ENST00000438964 SLC51BQ86UW2 128 aa12.72□□□□□ -0.37
ACTN1-204ENST00000438964 TRIM69Q86WT6 500 aa12.72□□□□□ -0.37
ACTN1-204ENST00000438964 MARCH9Q86YJ5 346 aa12.72□□□□□ -0.37
ACTN1-204ENST00000438964 VPS37AQ8NEZ2 397 aa12.72□□□□□ -0.37
ACTN1-204ENST00000438964 OR8J2Q8NGG1 315 aa12.72□□□□□ -0.37
ACTN1-204ENST00000438964 OR4D11Q8NGI4 311 aa12.72□□□□□ -0.37
ACTN1-204ENST00000438964 ASIC4Q96FT7 647 aa12.72□□□□□ -0.37
ACTN1-204ENST00000438964 MSLNLQ96KJ4 702 aa12.72□□□□□ -0.37
ACTN1-204ENST00000438964 CHIAQ9BZP6 476 aa12.72□□□□□ -0.37
ACTN1-204ENST00000438964 NIPAL2Q9H841 368 aa12.72□□□□□ -0.37
ACTN1-204ENST00000438964 MRPL15Q9P015 296 aaKnown RBP12.72□□□□□ -0.37
ACTN1-204ENST00000438964 TRPV2Q9Y5S1 764 aa12.72□□□□□ -0.37
ACTN1-204ENST00000438964 EEF1E1O43324 174 aaKnown RBP12.72□□□□□ -0.37
ACTN1-204ENST00000438964 CHP2O43745 196 aa12.72□□□□□ -0.37
ACTN1-204ENST00000438964 PROS1P07225 676 aa12.72□□□□□ -0.37
ACTN1-204ENST00000438964 LHCGRP22888 699 aa12.72□□□□□ -0.37
ACTN1-204ENST00000438964 EXOSC2Q13868 293 aaKnown RBP12.72□□□□□ -0.37
ACTN1-204ENST00000438964 GPR176Q14439 515 aa12.72□□□□□ -0.37
ACTN1-204ENST00000438964 LIPIQ6XZB0 460 aa12.72□□□□□ -0.37
ACTN1-204ENST00000438964 NXPE1Q8N323 547 aa12.72□□□□□ -0.37
ACTN1-204ENST00000438964 PGBD3Q8N328 593 aa12.72□□□□□ -0.37
ACTN1-204ENST00000438964 OR4F15Q8NGB8 312 aa12.72□□□□□ -0.37
ACTN1-204ENST00000438964 WDR48Q8TAF3 677 aa12.72□□□□□ -0.37
ACTN1-204ENST00000438964 TBX5Q99593 518 aa12.72□□□□□ -0.37
ACTN1-204ENST00000438964 NRTNQ99748 197 aa12.72□□□□□ -0.37
ACTN1-204ENST00000438964 TRAF4Q9BUZ4 470 aaPredicted RBP12.72□□□□□ -0.37
ACTN1-204ENST00000438964 GTPBP2Q9BX10 602 aaKnown RBP12.72□□□□□ -0.37
ACTN1-204ENST00000438964 EGLN3Q9H6Z9 239 aa12.72□□□□□ -0.37
ACTN1-204ENST00000438964 EXTL2Q9UBQ6 330 aa12.72□□□□□ -0.37
ACTN1-204ENST00000438964 LHX3Q9UBR4 397 aa12.72□□□□□ -0.37
ACTN1-204ENST00000438964 REV1Q9UBZ9 1251 aa12.72□□□□□ -0.37
ACTN1-204ENST00000438964 ATP6V1HQ9UI12 483 aa12.72□□□□□ -0.37
ACTN1-204ENST00000438964 NCKAP1Q9Y2A7 1128 aa12.72□□□□□ -0.37
ACTN1-204ENST00000438964 M0R3H8 397 aa12.72□□□□□ -0.37
ACTN1-204ENST00000438964 PDPK1O15530 556 aa12.72□□□□□ -0.37
ACTN1-204ENST00000438964 RFPL3O75679 317 aa12.72□□□□□ -0.37
ACTN1-204ENST00000438964 ARHGEF15O94989 841 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms