RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 PFN3P60673 137 aa11.03□□□□□ -0.64
TRAPPC9-202ENST00000438773 IL18R1Q13478 541 aa11.03□□□□□ -0.64
TRAPPC9-202ENST00000438773 GGTA1PQ4G0N0 100 aa11.03□□□□□ -0.64
TRAPPC9-202ENST00000438773 HIST3H2AQ7L7L0 130 aa11.03□□□□□ -0.64
TRAPPC9-202ENST00000438773 RANBP3LQ86VV4 465 aaPredicted RBP11.03□□□□□ -0.64
TRAPPC9-202ENST00000438773 DPP10Q8N608 796 aa11.03□□□□□ -0.64
TRAPPC9-202ENST00000438773 ANKFN1Q8N957 763 aa11.03□□□□□ -0.64
TRAPPC9-202ENST00000438773 NETO1Q8TDF5 533 aa11.03□□□□□ -0.64
TRAPPC9-202ENST00000438773 HIST1H2ACQ93077 130 aa11.03□□□□□ -0.64
TRAPPC9-202ENST00000438773 LTB4R2Q9NPC1 389 aa11.03□□□□□ -0.64
TRAPPC9-202ENST00000438773 LOC100130705A0A1B0GUX0 176 aa11.02□□□□□ -0.64
TRAPPC9-202ENST00000438773 SLC5A10A0PJK1 596 aa11.02□□□□□ -0.64
TRAPPC9-202ENST00000438773 PRAMEF26H0Y7S4 382 aa11.02□□□□□ -0.64
TRAPPC9-202ENST00000438773 IL1RNP18510 177 aa11.02□□□□□ -0.64
TRAPPC9-202ENST00000438773 BMXP51813 675 aa11.02□□□□□ -0.64
TRAPPC9-202ENST00000438773 ATP12AP54707 1039 aa11.02□□□□□ -0.64
TRAPPC9-202ENST00000438773 RPS15AP62244 130 aaKnown RBP11.02□□□□□ -0.64
TRAPPC9-202ENST00000438773 RELAQ04206 551 aa11.02□□□□□ -0.64
TRAPPC9-202ENST00000438773 PRDX1Q06830 199 aaKnown RBP11.02□□□□□ -0.64
TRAPPC9-202ENST00000438773 HYAL2Q12891 473 aa11.02□□□□□ -0.64
TRAPPC9-202ENST00000438773 UGT3A2Q3SY77 523 aa11.02□□□□□ -0.64
TRAPPC9-202ENST00000438773 RUNDC3AQ59EK9 446 aa11.02□□□□□ -0.64
TRAPPC9-202ENST00000438773 DHRS4L2Q6PKH6 230 aa11.02□□□□□ -0.64
TRAPPC9-202ENST00000438773 ADAMTSL4Q6UY14 1074 aa11.02□□□□□ -0.64
TRAPPC9-202ENST00000438773 TECPR1Q7Z6L1 1165 aa11.02□□□□□ -0.64
TRAPPC9-202ENST00000438773 NRROSQ86YC3 692 aa11.02□□□□□ -0.64
TRAPPC9-202ENST00000438773 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.02□□□□□ -0.64
TRAPPC9-202ENST00000438773 ADGRG5Q8IZF4 528 aa11.02□□□□□ -0.64
TRAPPC9-202ENST00000438773 NAGSQ8N159 534 aa11.02□□□□□ -0.64
TRAPPC9-202ENST00000438773 OR5K2Q8NHB8 316 aa11.02□□□□□ -0.64
TRAPPC9-202ENST00000438773 FRS2Q8WU20 508 aa11.02□□□□□ -0.64
TRAPPC9-202ENST00000438773 CIDECQ96AQ7 238 aaPredicted RBP11.02□□□□□ -0.64
TRAPPC9-202ENST00000438773 EHD1Q9H4M9 534 aa11.02□□□□□ -0.64
TRAPPC9-202ENST00000438773 LYARQ9NX58 379 aaKnown RBP11.02□□□□□ -0.64
TRAPPC9-202ENST00000438773 ZSCAN32Q9NX65 697 aa11.02□□□□□ -0.64
TRAPPC9-202ENST00000438773 MAGED1Q9Y5V3 778 aaPredicted RBP11.02□□□□□ -0.64
TRAPPC9-202ENST00000438773 C1orf226A1L170 272 aa11.02□□□□□ -0.65
TRAPPC9-202ENST00000438773 FUOMA2VDF0 154 aa11.02□□□□□ -0.65
TRAPPC9-202ENST00000438773 A8MUA0 341 aa11.02□□□□□ -0.65
TRAPPC9-202ENST00000438773 ZNF217O75362 1048 aa11.02□□□□□ -0.65
TRAPPC9-202ENST00000438773 CLPXO76031 633 aa11.02□□□□□ -0.65
TRAPPC9-202ENST00000438773 EGFP01133 1207 aa11.02□□□□□ -0.65
TRAPPC9-202ENST00000438773 BMP2P12643 396 aa11.02□□□□□ -0.65
TRAPPC9-202ENST00000438773 RAB14P61106 215 aa11.02□□□□□ -0.65
TRAPPC9-202ENST00000438773 KCNC4Q03721 635 aa11.02□□□□□ -0.65
TRAPPC9-202ENST00000438773 POMZP3Q6PJE2 187 aa11.02□□□□□ -0.65
TRAPPC9-202ENST00000438773 FAM217AQ8IXS0 508 aa11.02□□□□□ -0.65
TRAPPC9-202ENST00000438773 SLC7A5P1Q8MH63 180 aa11.02□□□□□ -0.65
TRAPPC9-202ENST00000438773 PIGXQ8TBF5 258 aa11.02□□□□□ -0.65
TRAPPC9-202ENST00000438773 DOK4Q8TEW6 326 aa11.02□□□□□ -0.65
TRAPPC9-202ENST00000438773 TMEM203Q969S6 136 aa11.02□□□□□ -0.65
TRAPPC9-202ENST00000438773 C1GALT1C1Q96EU7 318 aa11.02□□□□□ -0.65
TRAPPC9-202ENST00000438773 METTL2AQ96IZ6 378 aaKnown RBP11.02□□□□□ -0.65
TRAPPC9-202ENST00000438773 DOHHQ9BU89 302 aa11.02□□□□□ -0.65
TRAPPC9-202ENST00000438773 RSPH9Q9H1X1 276 aaPredicted RBP11.02□□□□□ -0.65
TRAPPC9-202ENST00000438773 MBNL1Q9NR56 388 aaKnown RBP11.02□□□□□ -0.65
TRAPPC9-202ENST00000438773 ARMC1Q9NVT9 282 aa11.02□□□□□ -0.65
TRAPPC9-202ENST00000438773 MS4A12Q9NXJ0 267 aa11.02□□□□□ -0.65
TRAPPC9-202ENST00000438773 WDR45Q9Y484 360 aa11.02□□□□□ -0.65
TRAPPC9-202ENST00000438773 GFYI3L273 518 aa11.02□□□□□ -0.65
TRAPPC9-202ENST00000438773 GPR37L1O60883 481 aa11.02□□□□□ -0.65
TRAPPC9-202ENST00000438773 DRD2P14416 443 aa11.02□□□□□ -0.65
TRAPPC9-202ENST00000438773 SIM1P81133 766 aaPredicted RBP11.02□□□□□ -0.65
TRAPPC9-202ENST00000438773 ZFP69Q49AA0 526 aa11.02□□□□□ -0.65
TRAPPC9-202ENST00000438773 CRB2Q5IJ48 1285 aa11.02□□□□□ -0.65
TRAPPC9-202ENST00000438773 DCDC5Q6ZRR9 648 aa11.02□□□□□ -0.65
TRAPPC9-202ENST00000438773 HMGN2P46Q86SG4 172 aa11.02□□□□□ -0.65
TRAPPC9-202ENST00000438773 LUZP2Q86TE4 346 aa11.02□□□□□ -0.65
TRAPPC9-202ENST00000438773 OR4N5Q8IXE1 308 aa11.02□□□□□ -0.65
TRAPPC9-202ENST00000438773 Q8N9G6 341 aaPredicted RBP11.02□□□□□ -0.65
TRAPPC9-202ENST00000438773 SLC35C2Q9NQQ7 365 aa11.02□□□□□ -0.65
TRAPPC9-202ENST00000438773 TVP23BQ9NYZ1 205 aa11.02□□□□□ -0.65
TRAPPC9-202ENST00000438773 SEC16AO15027 2179 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 FAM170BA6NMN3 283 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 H0YJX3 145 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 CDC123O75794 336 aaPredicted RBP11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 PORP16435 677 aaPredicted RBP11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 B4GALNT1Q00973 533 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 NFATC4Q14934 902 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 BCL7AQ4VC05 210 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 XKR7Q5GH72 579 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 GHDCQ8N2G8 530 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 SLC15A4Q8N697 577 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 CSNK1A1LQ8N752 337 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 ZNF563Q8TA94 476 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 NUDT8Q8WV74 236 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 METTL21AQ8WXB1 218 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 RELTQ969Z4 430 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 C1QTNF3Q9BXJ4 246 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 ANKMY1Q9P2S6 941 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 MRTO4Q9UKD2 239 aaKnown RBP11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 WBP11Q9Y2W2 641 aaKnown RBP11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 ZNF451Q9Y4E5 1061 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 CLCA3PQ9Y6N3 262 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 NDUFB5O43674 189 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 GMFGO60234 142 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 SCN2BO60939 215 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 SDC3O75056 442 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 ADAM23O75077 832 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 CD36P16671 472 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms