RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 BRD4O60885 1362 aaPredicted RBP3.12□□□□□ -1.91
LSM1P1-201ENST00000438629 TMEM94Q12767 1356 aa3.12□□□□□ -1.91
LSM1P1-201ENST00000438629 FGD5Q6ZNL6 1462 aa3.11□□□□□ -1.91
LSM1P1-201ENST00000438629 ATP6AP2A0A1C7CYW4 349 aa3.11□□□□□ -1.91
LSM1P1-201ENST00000438629 CLRN2A0PK11 232 aa3.11□□□□□ -1.91
LSM1P1-201ENST00000438629 CHUKO15111 745 aa3.11□□□□□ -1.91
LSM1P1-201ENST00000438629 SNAP91O60641 907 aa3.11□□□□□ -1.91
LSM1P1-201ENST00000438629 PRDM1O75626 825 aa3.11□□□□□ -1.91
LSM1P1-201ENST00000438629 PALMO75781 387 aa3.11□□□□□ -1.91
LSM1P1-201ENST00000438629 TRIM16O95361 564 aa3.11□□□□□ -1.91
LSM1P1-201ENST00000438629 EPOP01588 193 aa3.11□□□□□ -1.91
LSM1P1-201ENST00000438629 ODC1P11926 461 aa3.11□□□□□ -1.91
LSM1P1-201ENST00000438629 CYP3A5P20815 502 aa3.11□□□□□ -1.91
LSM1P1-201ENST00000438629 BACE1P56817 501 aa3.11□□□□□ -1.91
LSM1P1-201ENST00000438629 SLC8A3P57103 927 aa3.11□□□□□ -1.91
LSM1P1-201ENST00000438629 SLC26A5P58743 744 aa3.11□□□□□ -1.91
LSM1P1-201ENST00000438629 FCHO2Q0JRZ9 810 aa3.11□□□□□ -1.91
LSM1P1-201ENST00000438629 ENPP2Q13822 863 aa3.11□□□□□ -1.91
LSM1P1-201ENST00000438629 SGCBQ16585 318 aa3.11□□□□□ -1.91
LSM1P1-201ENST00000438629 RABL6Q3YEC7 729 aaPredicted RBP3.11□□□□□ -1.91
LSM1P1-201ENST00000438629 TMEM270Q6UE05 265 aa3.11□□□□□ -1.91
LSM1P1-201ENST00000438629 MYPOPQ86VE0 399 aaPredicted RBP3.11□□□□□ -1.91
LSM1P1-201ENST00000438629 CATSPER3Q86XQ3 398 aa3.11□□□□□ -1.91
LSM1P1-201ENST00000438629 OR4N5Q8IXE1 308 aa3.11□□□□□ -1.91
LSM1P1-201ENST00000438629 MRPL43Q8N983 215 aaKnown RBP3.11□□□□□ -1.91
LSM1P1-201ENST00000438629 CNNM3Q8NE01 707 aa3.11□□□□□ -1.91
LSM1P1-201ENST00000438629 GOLGA5Q8TBA6 731 aa3.11□□□□□ -1.91
LSM1P1-201ENST00000438629 MIPOL1Q8TD10 442 aa3.11□□□□□ -1.91
LSM1P1-201ENST00000438629 ANKRD49Q8WVL7 239 aa3.11□□□□□ -1.91
LSM1P1-201ENST00000438629 PCNPQ8WW12 178 aaKnown RBP3.11□□□□□ -1.91
LSM1P1-201ENST00000438629 C11orf52Q96A22 123 aa3.11□□□□□ -1.91
LSM1P1-201ENST00000438629 FAM111AQ96PZ2 611 aa3.11□□□□□ -1.91
LSM1P1-201ENST00000438629 ATOH8Q96SQ7 321 aa3.11□□□□□ -1.91
LSM1P1-201ENST00000438629 SSX3Q99909 188 aa3.11□□□□□ -1.91
LSM1P1-201ENST00000438629 SPAG8Q99932 426 aaPredicted RBP3.11□□□□□ -1.91
LSM1P1-201ENST00000438629 SLC39A3Q9BRY0 314 aa3.11□□□□□ -1.91
LSM1P1-201ENST00000438629 ACPTQ9BZG2 426 aa3.11□□□□□ -1.91
LSM1P1-201ENST00000438629 SLC7A5P2Q9GIP4 190 aa3.11□□□□□ -1.91
LSM1P1-201ENST00000438629 TSPYL1Q9H0U9 437 aa3.11□□□□□ -1.91
LSM1P1-201ENST00000438629 DPH5Q9H2P9 285 aa3.11□□□□□ -1.91
LSM1P1-201ENST00000438629 ZNF665Q9H7R5 613 aa3.11□□□□□ -1.91
LSM1P1-201ENST00000438629 MOB1AQ9H8S9 216 aa3.11□□□□□ -1.91
LSM1P1-201ENST00000438629 LIN28AQ9H9Z2 209 aaKnown RBP3.11□□□□□ -1.91
LSM1P1-201ENST00000438629 ZNHIT6Q9NWK9 470 aaKnown RBP3.11□□□□□ -1.91
LSM1P1-201ENST00000438629 AATFQ9NY61 560 aaKnown RBP eCLIP3.11□□□□□ -1.91
LSM1P1-201ENST00000438629 THYN1Q9P016 225 aa3.11□□□□□ -1.91
LSM1P1-201ENST00000438629 HMG20BQ9P0W2 317 aa3.11□□□□□ -1.91
LSM1P1-201ENST00000438629 PAK5Q9P286 719 aa3.11□□□□□ -1.91
LSM1P1-201ENST00000438629 THAP10Q9P2Z0 257 aaPredicted RBP3.11□□□□□ -1.91
LSM1P1-201ENST00000438629 PIN4Q9Y237 131 aaKnown RBP3.11□□□□□ -1.91
LSM1P1-201ENST00000438629 RGSL1A5PLK6 1076 aa3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 GLTPD2A6NH11 291 aa3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 CCDC169A6NNP5 214 aa3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 ARHGEF33A8MVX0 844 aa3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 TMCO5BA8MYB1 307 aa3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 CASQ2O14958 399 aaPredicted RBP3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 TSC22D2O75157 780 aa3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 PEX11AO75192 247 aa3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 BCAS2O75934 225 aaPredicted RBP3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 APBB3O95704 486 aa3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 OPN1MWP04001 364 aa3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 HMOX1P09601 288 aa3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 SBK2P0C263 348 aa3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 OPN1MW2P0DN77 364 aa3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 OPN1MW3P0DN78 364 aa3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 GZMAP12544 262 aa3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 SHC1P29353 583 aa3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 ADSSP30520 456 aa3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 ALDH3B1P43353 468 aa3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 ASMTP46597 345 aa3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 ZFP36L2P47974 494 aaKnown RBP3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 PGFP49763 221 aa3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 FHITP49789 147 aa3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 NME5P56597 212 aa3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 KCNK10P57789 538 aa3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 MFGE8Q08431 387 aaPredicted RBP3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 C17orf67Q0P5P2 114 aa3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 GIT2Q14161 759 aa3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 FASTKQ14296 549 aaKnown RBP3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 MEF2DQ14814 521 aa3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 SLC1A5Q15758 541 aa3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 ECSCRQ19T08 205 aa3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 WSCD2Q2TBF2 565 aa3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 SNAI3Q3KNW1 292 aa3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 CCDC40Q4G0X9 1142 aa3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 FILIP1LQ4L180 1135 aa3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 IFI44LQ53G44 452 aa3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 MTERF4Q7Z6M4 381 aaKnown RBP3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 CACUL1Q86Y37 369 aa3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 MYOCDQ8IZQ8 938 aa3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 DRAXINQ8NBI3 349 aaPredicted RBP3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 SIDT2Q8NBJ9 832 aaKnown RBP3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 CLEC1AQ8NC01 280 aa3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 TRPV3Q8NET8 790 aa3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 BEST4Q8NFU0 473 aa3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 KIAA1524Q8TCG1 905 aa3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 CHPT1Q8WUD6 406 aa3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 LIPHQ8WWY8 451 aa3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 HAS2Q92819 552 aa3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 BCL2L2Q92843 193 aaPredicted RBP3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms