RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 CCDC160A6NGH7 325 aa24.29■■□□□ 1.48
CPNE1-216ENST00000437340 ZNF217O75362 1048 aa24.29■■□□□ 1.48
CPNE1-216ENST00000437340 BCHEP06276 602 aa24.29■■□□□ 1.48
CPNE1-216ENST00000437340 POLR2CP19387 275 aaPredicted RBP24.29■■□□□ 1.48
CPNE1-216ENST00000437340 CRHBPP24387 322 aa24.29■■□□□ 1.48
CPNE1-216ENST00000437340 KCNC4Q03721 635 aa24.29■■□□□ 1.48
CPNE1-216ENST00000437340 CD47Q08722 323 aa24.29■■□□□ 1.48
CPNE1-216ENST00000437340 FZD2Q14332 565 aa24.29■■□□□ 1.48
CPNE1-216ENST00000437340 FIGLAQ6QHK4 219 aa24.29■■□□□ 1.48
CPNE1-216ENST00000437340 GALNT5Q7Z7M9 940 aa24.29■■□□□ 1.48
CPNE1-216ENST00000437340 UBALD2Q8IYN6 164 aa24.29■■□□□ 1.48
CPNE1-216ENST00000437340 TSTD1Q8NFU3 115 aa24.29■■□□□ 1.48
CPNE1-216ENST00000437340 GIMAP4Q9NUV9 329 aa24.29■■□□□ 1.48
CPNE1-216ENST00000437340 PTTG2Q9NZH5 202 aa24.29■■□□□ 1.48
CPNE1-216ENST00000437340 MUTYHQ9UIF7 546 aa24.29■■□□□ 1.48
CPNE1-216ENST00000437340 MDC1Q14676 2089 aaKnown RBP24.29■■□□□ 1.48
CPNE1-216ENST00000437340 GSAPA4D1B5 854 aa24.29■■□□□ 1.48
CPNE1-216ENST00000437340 URADA6NGE7 173 aa24.29■■□□□ 1.48
CPNE1-216ENST00000437340 C2orf74A8MZ97 194 aa24.29■■□□□ 1.48
CPNE1-216ENST00000437340 PRAMEF10O60809 474 aa24.29■■□□□ 1.48
CPNE1-216ENST00000437340 ERAL1O75616 437 aaKnown RBP24.29■■□□□ 1.48
CPNE1-216ENST00000437340 CSNK2A2P19784 350 aaPredicted RBP24.29■■□□□ 1.48
CPNE1-216ENST00000437340 TTKP33981 857 aa24.29■■□□□ 1.48
CPNE1-216ENST00000437340 POLR2IP36954 125 aaKnown RBP24.29■■□□□ 1.48
CPNE1-216ENST00000437340 XCR1P46094 333 aa24.29■■□□□ 1.48
CPNE1-216ENST00000437340 ANXA11P50995 505 aaKnown RBP24.29■■□□□ 1.48
CPNE1-216ENST00000437340 BLKP51451 505 aa24.29■■□□□ 1.48
CPNE1-216ENST00000437340 GABARAPL2P60520 117 aa24.29■■□□□ 1.48
CPNE1-216ENST00000437340 BTN3A2P78410 334 aa24.29■■□□□ 1.48
CPNE1-216ENST00000437340 ZBED5Q49AG3 693 aa24.29■■□□□ 1.48
CPNE1-216ENST00000437340 FCRL6Q6DN72 434 aa24.29■■□□□ 1.48
CPNE1-216ENST00000437340 GPR141Q7Z602 305 aa24.29■■□□□ 1.48
CPNE1-216ENST00000437340 TRIM73Q86UV7 250 aa24.29■■□□□ 1.48
CPNE1-216ENST00000437340 KCT2Q8NC54 265 aa24.29■■□□□ 1.48
CPNE1-216ENST00000437340 OR4C15Q8NGM1 316 aa24.29■■□□□ 1.48
CPNE1-216ENST00000437340 UTP15Q8TED0 518 aaKnown RBP24.29■■□□□ 1.48
CPNE1-216ENST00000437340 GIPC3Q8TF64 312 aa24.29■■□□□ 1.48
CPNE1-216ENST00000437340 RASSF5Q8WWW0 418 aa24.29■■□□□ 1.48
CPNE1-216ENST00000437340 TMIGD2Q96BF3 282 aa24.29■■□□□ 1.48
CPNE1-216ENST00000437340 CNRIP1Q96F85 164 aaPredicted RBP24.29■■□□□ 1.48
CPNE1-216ENST00000437340 NPLQ9BXD5 320 aaPredicted RBP24.29■■□□□ 1.48
CPNE1-216ENST00000437340 TCEAL2Q9H3H9 227 aaPredicted RBP24.29■■□□□ 1.48
CPNE1-216ENST00000437340 RIBC2Q9H4K1 309 aa24.29■■□□□ 1.48
CPNE1-216ENST00000437340 ZCCHC3Q9NUD5 404 aaKnown RBP24.29■■□□□ 1.48
CPNE1-216ENST00000437340 EXD2Q9NVH0 621 aa24.29■■□□□ 1.48
CPNE1-216ENST00000437340 P2RX2Q9UBL9 471 aa24.29■■□□□ 1.48
CPNE1-216ENST00000437340 PILRAQ9UKJ1 303 aa24.29■■□□□ 1.48
CPNE1-216ENST00000437340 PSME2Q9UL46 239 aa24.29■■□□□ 1.48
CPNE1-216ENST00000437340 PRAMEF25A6NGN4 478 aa24.28■■□□□ 1.48
CPNE1-216ENST00000437340 GLOD5A6NK44 160 aa24.28■■□□□ 1.48
CPNE1-216ENST00000437340 A8MVJ9 347 aa24.28■■□□□ 1.48
CPNE1-216ENST00000437340 H3BSA7 217 aa24.28■■□□□ 1.48
CPNE1-216ENST00000437340 PRKRAO75569 313 aaKnown RBP24.28■■□□□ 1.48
CPNE1-216ENST00000437340 SMIM10L1P0DMW3 83 aa24.28■■□□□ 1.48
CPNE1-216ENST00000437340 OR1E2P47887 323 aa24.28■■□□□ 1.48
CPNE1-216ENST00000437340 SUZ12Q15022 739 aaKnown RBP24.28■■□□□ 1.48
CPNE1-216ENST00000437340 TTC29Q8NA56 475 aaPredicted RBP24.28■■□□□ 1.48
CPNE1-216ENST00000437340 OR10G6Q8NH81 332 aa24.28■■□□□ 1.48
CPNE1-216ENST00000437340 SUN3Q8TAQ9 357 aa24.28■■□□□ 1.48
CPNE1-216ENST00000437340 SMIM10Q96HG1 83 aa24.28■■□□□ 1.48
CPNE1-216ENST00000437340 FCRL4Q96PJ5 515 aa24.28■■□□□ 1.48
CPNE1-216ENST00000437340 ADNPQ9H2P0 1102 aa24.28■■□□□ 1.48
CPNE1-216ENST00000437340 SERHL2Q9H4I8 314 aa24.28■■□□□ 1.48
CPNE1-216ENST00000437340 TESMINQ9Y4I5 508 aa24.28■■□□□ 1.48
CPNE1-216ENST00000437340 FANCMQ8IYD8 2048 aa24.28■■□□□ 1.48
CPNE1-216ENST00000437340 WASHC1A8K0Z3 465 aa24.27■■□□□ 1.48
CPNE1-216ENST00000437340 TNFRSF1BP20333 461 aa24.27■■□□□ 1.48
CPNE1-216ENST00000437340 MPIP34949 423 aa24.27■■□□□ 1.48
CPNE1-216ENST00000437340 PEX19P40855 299 aa24.27■■□□□ 1.48
CPNE1-216ENST00000437340 YAP1P46937 504 aaKnown RBP24.27■■□□□ 1.48
CPNE1-216ENST00000437340 MEP1AQ16819 746 aa24.27■■□□□ 1.48
CPNE1-216ENST00000437340 BROXQ5VW32 411 aa24.27■■□□□ 1.48
CPNE1-216ENST00000437340 C18orf63Q68DL7 685 aa24.27■■□□□ 1.48
CPNE1-216ENST00000437340 B3GNT6Q6ZMB0 384 aa24.27■■□□□ 1.48
CPNE1-216ENST00000437340 RBM12BQ8IXT5 1001 aaKnown RBP24.27■■□□□ 1.48
CPNE1-216ENST00000437340 GALNT15Q8N3T1 639 aa24.27■■□□□ 1.48
CPNE1-216ENST00000437340 SMYD1Q8NB12 490 aa24.27■■□□□ 1.48
CPNE1-216ENST00000437340 ZNF607Q96SK3 696 aa24.27■■□□□ 1.48
CPNE1-216ENST00000437340 NELL2Q99435 816 aa24.27■■□□□ 1.48
CPNE1-216ENST00000437340 PIP5K1AQ99755 562 aa24.27■■□□□ 1.48
CPNE1-216ENST00000437340 PAPOLBQ9NRJ5 636 aaKnown RBP24.27■■□□□ 1.48
CPNE1-216ENST00000437340 NDRG4Q9ULP0 352 aaKnown RBP24.27■■□□□ 1.48
CPNE1-216ENST00000437340 FAM32AQ9Y421 112 aaKnown RBP24.27■■□□□ 1.48
CPNE1-216ENST00000437340 ENPP4Q9Y6X5 453 aa24.27■■□□□ 1.48
CPNE1-216ENST00000437340 CTSVO60911 334 aa24.26■■□□□ 1.47
CPNE1-216ENST00000437340 MFN2O95140 757 aa24.26■■□□□ 1.47
CPNE1-216ENST00000437340 CCDC159P0C7I6 412 aa24.26■■□□□ 1.47
CPNE1-216ENST00000437340 ZNF888P0CJ79 500 aaPredicted RBP24.26■■□□□ 1.47
CPNE1-216ENST00000437340 RHCEP18577 417 aa24.26■■□□□ 1.47
CPNE1-216ENST00000437340 CD247P20963 164 aa24.26■■□□□ 1.47
CPNE1-216ENST00000437340 EEF1B2P24534 225 aaKnown RBP24.26■■□□□ 1.47
CPNE1-216ENST00000437340 CLK3P49761 638 aaKnown RBP24.26■■□□□ 1.47
CPNE1-216ENST00000437340 KHKP50053 298 aa24.26■■□□□ 1.47
CPNE1-216ENST00000437340 HMGA2P52926 109 aa24.26■■□□□ 1.47
CPNE1-216ENST00000437340 SPIBQ01892 262 aa24.26■■□□□ 1.47
CPNE1-216ENST00000437340 MAPK11Q15759 364 aa24.26■■□□□ 1.47
CPNE1-216ENST00000437340 CTU2Q2VPK5 515 aaKnown RBP24.26■■□□□ 1.47
CPNE1-216ENST00000437340 TAF8Q7Z7C8 310 aa24.26■■□□□ 1.47
CPNE1-216ENST00000437340 CAMKVQ8NCB2 501 aa24.26■■□□□ 1.47
CPNE1-216ENST00000437340 OR56A1Q8NGH5 318 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms