RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 RBCK1Q9BYM8 510 aa15.19■□□□□ 0.02
PTPN13-204ENST00000436978 RNF6Q9Y252 685 aa15.19■□□□□ 0.02
PTPN13-204ENST00000436978 UGDHO60701 494 aa15.19■□□□□ 0.02
PTPN13-204ENST00000436978 PRAMEF2O60811 474 aa15.19■□□□□ 0.02
PTPN13-204ENST00000436978 RASAL1O95294 804 aa15.19■□□□□ 0.02
PTPN13-204ENST00000436978 CD63P08962 238 aa15.19■□□□□ 0.02
PTPN13-204ENST00000436978 SPARCP09486 303 aa15.19■□□□□ 0.02
PTPN13-204ENST00000436978 HMGCLP35914 325 aa15.19■□□□□ 0.02
PTPN13-204ENST00000436978 E2F1Q01094 437 aa15.19■□□□□ 0.02
PTPN13-204ENST00000436978 GALK2Q01415 458 aa15.19■□□□□ 0.02
PTPN13-204ENST00000436978 NIPAL4Q0D2K0 466 aa15.19■□□□□ 0.02
PTPN13-204ENST00000436978 ZNF648Q5T619 568 aaPredicted RBP15.19■□□□□ 0.02
PTPN13-204ENST00000436978 GRHL2Q6ISB3 625 aa15.19■□□□□ 0.02
PTPN13-204ENST00000436978 IGDCC3Q8IVU1 814 aa15.19■□□□□ 0.02
PTPN13-204ENST00000436978 GALNT12Q8IXK2 581 aa15.19■□□□□ 0.02
PTPN13-204ENST00000436978 ZNF100Q8IYN0 542 aa15.19■□□□□ 0.02
PTPN13-204ENST00000436978 OR9I1Q8NGQ6 314 aa15.19■□□□□ 0.02
PTPN13-204ENST00000436978 TMEM203Q969S6 136 aa15.19■□□□□ 0.02
PTPN13-204ENST00000436978 TSACCQ96A04 125 aaPredicted RBP15.19■□□□□ 0.02
PTPN13-204ENST00000436978 IRF2P14316 349 aa15.19■□□□□ 0.02
PTPN13-204ENST00000436978 MADCAM1Q13477 382 aa15.19■□□□□ 0.02
PTPN13-204ENST00000436978 UBE2Q1Q7Z7E8 422 aa15.19■□□□□ 0.02
PTPN13-204ENST00000436978 DHDHQ9UQ10 334 aa15.19■□□□□ 0.02
PTPN13-204ENST00000436978 IGKV6-21A0A0C4DH24 114 aa15.19■□□□□ 0.02
PTPN13-204ENST00000436978 P04436 131 aa15.19■□□□□ 0.02
PTPN13-204ENST00000436978 ACADVLP49748 655 aa15.19■□□□□ 0.02
PTPN13-204ENST00000436978 SHQ1Q6PI26 577 aaKnown RBP15.19■□□□□ 0.02
PTPN13-204ENST00000436978 DPH7Q9BTV6 452 aa15.19■□□□□ 0.02
PTPN13-204ENST00000436978 FN3KQ9H479 309 aa15.19■□□□□ 0.02
PTPN13-204ENST00000436978 TMEM9Q9P0T7 183 aa15.19■□□□□ 0.02
PTPN13-204ENST00000436978 HTR1EP28566 365 aa15.19■□□□□ 0.02
PTPN13-204ENST00000436978 GRIK2Q13002 908 aa15.19■□□□□ 0.02
PTPN13-204ENST00000436978 SF3B4Q15427 424 aaKnown RBP eCLIP15.19■□□□□ 0.02
PTPN13-204ENST00000436978 C17orf99Q6UX52 265 aa15.19■□□□□ 0.02
PTPN13-204ENST00000436978 FLRT2O43155 660 aa15.19■□□□□ 0.02
PTPN13-204ENST00000436978 BPNT1O95861 308 aa15.19■□□□□ 0.02
PTPN13-204ENST00000436978 UGT3A2Q3SY77 523 aa15.19■□□□□ 0.02
PTPN13-204ENST00000436978 KANK2Q63ZY3 851 aa15.19■□□□□ 0.02
PTPN13-204ENST00000436978 CYS1Q717R9 158 aa15.19■□□□□ 0.02
PTPN13-204ENST00000436978 ZNF283Q8N7M2 679 aa15.19■□□□□ 0.02
PTPN13-204ENST00000436978 OR13C3Q8NGS6 347 aa15.19■□□□□ 0.02
PTPN13-204ENST00000436978 CREB3L1Q96BA8 519 aa15.19■□□□□ 0.02
PTPN13-204ENST00000436978 SLC5A7Q9GZV3 580 aa15.19■□□□□ 0.02
PTPN13-204ENST00000436978 BLACEA4D250 179 aa15.18■□□□□ 0.02
PTPN13-204ENST00000436978 CDRT1O95170 752 aa15.18■□□□□ 0.02
PTPN13-204ENST00000436978 HUS1BQ8NHY5 278 aa15.18■□□□□ 0.02
PTPN13-204ENST00000436978 HOXB9P17482 250 aaPredicted RBP15.18■□□□□ 0.02
PTPN13-204ENST00000436978 SOX4Q06945 474 aaPredicted RBP15.18■□□□□ 0.02
PTPN13-204ENST00000436978 RAET1LQ5VY80 246 aa15.18■□□□□ 0.02
PTPN13-204ENST00000436978 KRTCAP2Q8N6L1 136 aa15.18■□□□□ 0.02
PTPN13-204ENST00000436978 PGAP3Q96FM1 320 aaPredicted RBP15.18■□□□□ 0.02
PTPN13-204ENST00000436978 MTMR10Q9NXD2 777 aa15.18■□□□□ 0.02
PTPN13-204ENST00000436978 INMTO95050 263 aa15.18■□□□□ 0.02
PTPN13-204ENST00000436978 CHRM5P08912 532 aaPredicted RBP15.18■□□□□ 0.02
PTPN13-204ENST00000436978 HSD11B2P80365 405 aa15.18■□□□□ 0.02
PTPN13-204ENST00000436978 ISG20Q96AZ6 181 aaKnown RBP15.18■□□□□ 0.02
PTPN13-204ENST00000436978 OR1F2PQ96R84 312 aa15.18■□□□□ 0.02
PTPN13-204ENST00000436978 CITED4Q96RK1 184 aa15.18■□□□□ 0.02
PTPN13-204ENST00000436978 RXFP3Q9NSD7 469 aa15.18■□□□□ 0.02
PTPN13-204ENST00000436978 DNAJC27Q9NZQ0 273 aa15.18■□□□□ 0.02
PTPN13-204ENST00000436978 FEZF1A0PJY2 475 aa15.18■□□□□ 0.02
PTPN13-204ENST00000436978 EME2A4GXA9 379 aaPredicted RBP15.18■□□□□ 0.02
PTPN13-204ENST00000436978 E7ESA3 106 aa15.18■□□□□ 0.02
PTPN13-204ENST00000436978 RFPL1O75677 317 aa15.18■□□□□ 0.02
PTPN13-204ENST00000436978 ITGB7P26010 798 aa15.18■□□□□ 0.02
PTPN13-204ENST00000436978 HOXA11P31270 313 aaPredicted RBP15.18■□□□□ 0.02
PTPN13-204ENST00000436978 SLC35G1Q2M3R5 365 aa15.18■□□□□ 0.02
PTPN13-204ENST00000436978 RAD51DO75771 328 aa15.18■□□□□ 0.02
PTPN13-204ENST00000436978 DNAJB5O75953 348 aa15.18■□□□□ 0.02
PTPN13-204ENST00000436978 RPS3P23396 243 aaKnown RBP eCLIP15.18■□□□□ 0.02
PTPN13-204ENST00000436978 PTGR1Q14914 329 aa15.18■□□□□ 0.02
PTPN13-204ENST00000436978 CDKL4Q5MAI5 379 aa15.18■□□□□ 0.02
PTPN13-204ENST00000436978 DCP2Q8IU60 420 aaKnown RBP15.18■□□□□ 0.02
PTPN13-204ENST00000436978 HS3ST5Q8IZT8 346 aa15.18■□□□□ 0.02
PTPN13-204ENST00000436978 HDAC2Q92769 488 aaKnown RBP15.18■□□□□ 0.02
PTPN13-204ENST00000436978 XKR8Q9H6D3 395 aa15.18■□□□□ 0.02
PTPN13-204ENST00000436978 PSAT1Q9Y617 370 aa15.18■□□□□ 0.02
PTPN13-204ENST00000436978 C2orf92A0A1B0GVN3 265 aa15.18■□□□□ 0.02
PTPN13-204ENST00000436978 C15orf39Q6ZRI6 1047 aa15.18■□□□□ 0.02
PTPN13-204ENST00000436978 TMEM135Q86UB9 458 aa15.18■□□□□ 0.02
PTPN13-204ENST00000436978 OR52P1PQ8NH57 321 aa15.18■□□□□ 0.02
PTPN13-204ENST00000436978 ASB15Q8WXK1 588 aa15.18■□□□□ 0.02
PTPN13-204ENST00000436978 NANOS1Q8WY41 292 aaKnown RBP15.18■□□□□ 0.02
PTPN13-204ENST00000436978 L3HYPDHQ96EM0 354 aa15.18■□□□□ 0.02
PTPN13-204ENST00000436978 EPHA6Q9UF33 1036 aa15.18■□□□□ 0.02
PTPN13-204ENST00000436978 SCN7AQ01118 1682 aa15.18■□□□□ 0.02
PTPN13-204ENST00000436978 MYADML2A6NDP7 307 aa15.18■□□□□ 0.02
PTPN13-204ENST00000436978 GK3PQ14409 553 aa15.18■□□□□ 0.02
PTPN13-204ENST00000436978 DEFB134Q4QY38 66 aa15.18■□□□□ 0.02
PTPN13-204ENST00000436978 RTP2Q5QGT7 225 aa15.18■□□□□ 0.02
PTPN13-204ENST00000436978 RBM12BQ8IXT5 1001 aaKnown RBP15.18■□□□□ 0.02
PTPN13-204ENST00000436978 APCDD1Q8J025 514 aa15.18■□□□□ 0.02
PTPN13-204ENST00000436978 PLD6Q8N2A8 252 aaKnown RBP15.18■□□□□ 0.02
PTPN13-204ENST00000436978 OR6N2Q8NGY6 317 aa15.18■□□□□ 0.02
PTPN13-204ENST00000436978 FAM3CQ92520 227 aa15.18■□□□□ 0.02
PTPN13-204ENST00000436978 HSPA12BQ96MM6 686 aa15.18■□□□□ 0.02
PTPN13-204ENST00000436978 MYH14Q7Z406 1995 aaKnown RBP15.17■□□□□ 0.02
PTPN13-204ENST00000436978 LRRN3E7EW58 273 aa15.17■□□□□ 0.02
PTPN13-204ENST00000436978 TMX2-CTNND1H3BSU7 103 aa15.17■□□□□ 0.02
PTPN13-204ENST00000436978 RFPL2O75678 378 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms