RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.13■□□□□ 0.01
SMPD4-207ENST00000435455 TEX10Q9NXF1 929 aaPredicted RBP15.13■□□□□ 0.01
SMPD4-207ENST00000435455 LRFN1Q9P244 771 aa15.13■□□□□ 0.01
SMPD4-207ENST00000435455 YARS2Q9Y2Z4 477 aaKnown RBP15.13■□□□□ 0.01
SMPD4-207ENST00000435455 TIMM22Q9Y584 194 aa15.13■□□□□ 0.01
SMPD4-207ENST00000435455 POLEQ07864 2286 aa15.13■□□□□ 0.01
SMPD4-207ENST00000435455 ZGRF1Q86YA3 2104 aa15.13■□□□□ 0.01
SMPD4-207ENST00000435455 RELNP78509 3460 aa15.12■□□□□ 0.01
SMPD4-207ENST00000435455 PGRMC2O15173 223 aa15.12■□□□□ 0.01
SMPD4-207ENST00000435455 CRCPO75575 148 aa15.12■□□□□ 0.01
SMPD4-207ENST00000435455 ITGA10O75578 1167 aa15.12■□□□□ 0.01
SMPD4-207ENST00000435455 RASAL1O95294 804 aa15.12■□□□□ 0.01
SMPD4-207ENST00000435455 SLC35E2P0CK97 266 aa15.12■□□□□ 0.01
SMPD4-207ENST00000435455 UQCRFS1P47985 274 aa15.12■□□□□ 0.01
SMPD4-207ENST00000435455 SSR4P51571 173 aa15.12■□□□□ 0.01
SMPD4-207ENST00000435455 ACSM2AQ08AH3 577 aa15.12■□□□□ 0.01
SMPD4-207ENST00000435455 ELOAQ14241 798 aaKnown RBP15.12■□□□□ 0.01
SMPD4-207ENST00000435455 ACSM2BQ68CK6 577 aa15.12■□□□□ 0.01
SMPD4-207ENST00000435455 HOMEZQ8IX15 550 aa15.12■□□□□ 0.01
SMPD4-207ENST00000435455 TMEM156Q8N614 296 aa15.12■□□□□ 0.01
SMPD4-207ENST00000435455 OR4K14Q8NGD5 310 aa15.12■□□□□ 0.01
SMPD4-207ENST00000435455 OR5L2Q8NGL0 311 aa15.12■□□□□ 0.01
SMPD4-207ENST00000435455 SREK1Q8WXA9 508 aaKnown RBP15.12■□□□□ 0.01
SMPD4-207ENST00000435455 TMEM125Q96AQ2 219 aa15.12■□□□□ 0.01
SMPD4-207ENST00000435455 SENP5Q96HI0 755 aaPredicted RBP15.12■□□□□ 0.01
SMPD4-207ENST00000435455 FBXL20Q96IG2 436 aa15.12■□□□□ 0.01
SMPD4-207ENST00000435455 ASH1LQ9NR48 2969 aaKnown RBP15.12■□□□□ 0.01
SMPD4-207ENST00000435455 OLAHQ9NV23 265 aa15.12■□□□□ 0.01
SMPD4-207ENST00000435455 ANKRD10Q9NXR5 420 aa15.12■□□□□ 0.01
SMPD4-207ENST00000435455 MCM8Q9UJA3 840 aa15.12■□□□□ 0.01
SMPD4-207ENST00000435455 PSME2Q9UL46 239 aa15.12■□□□□ 0.01
SMPD4-207ENST00000435455 PTPN13Q12923 2485 aa15.12■□□□□ 0.01
SMPD4-207ENST00000435455 CROCCQ5TZA2 2017 aa15.12■□□□□ 0.01
SMPD4-207ENST00000435455 C1orf226A1L170 272 aa15.11■□□□□ 0.01
SMPD4-207ENST00000435455 ANKUB1A6NFN9 424 aa15.11■□□□□ 0.01
SMPD4-207ENST00000435455 WASHC1A8K0Z3 465 aa15.11■□□□□ 0.01
SMPD4-207ENST00000435455 RGS16O15492 202 aaPredicted RBP15.11■□□□□ 0.01
SMPD4-207ENST00000435455 PRKNO60260 465 aaPredicted RBP15.11■□□□□ 0.01
SMPD4-207ENST00000435455 SPAG7O75391 227 aa15.11■□□□□ 0.01
SMPD4-207ENST00000435455 SLC25A12O75746 678 aa15.11■□□□□ 0.01
SMPD4-207ENST00000435455 NEURL1O76050 574 aa15.11■□□□□ 0.01
SMPD4-207ENST00000435455 CBX6O95503 412 aa15.11■□□□□ 0.01
SMPD4-207ENST00000435455 SP1P08047 785 aa15.11■□□□□ 0.01
SMPD4-207ENST00000435455 UROSP10746 265 aa15.11■□□□□ 0.01
SMPD4-207ENST00000435455 EDN3P14138 238 aa15.11■□□□□ 0.01
SMPD4-207ENST00000435455 CHN1P15882 459 aa15.11■□□□□ 0.01
SMPD4-207ENST00000435455 ST13P50502 369 aaKnown RBP15.11■□□□□ 0.01
SMPD4-207ENST00000435455 ZNF844Q08AG5 666 aa15.11■□□□□ 0.01
SMPD4-207ENST00000435455 SPRED3Q2MJR0 410 aa15.11■□□□□ 0.01
SMPD4-207ENST00000435455 ZNF468Q5VIY5 522 aaPredicted RBP15.11■□□□□ 0.01
SMPD4-207ENST00000435455 FAM219BQ5XKK7 198 aa15.11■□□□□ 0.01
SMPD4-207ENST00000435455 SPINK14Q6IE38 97 aa15.11■□□□□ 0.01
SMPD4-207ENST00000435455 SLC25A25Q6KCM7 469 aa15.11■□□□□ 0.01
SMPD4-207ENST00000435455 CROCCP2Q86T23 111 aa15.11■□□□□ 0.01
SMPD4-207ENST00000435455 GPALPP1Q8IXQ4 340 aa15.11■□□□□ 0.01
SMPD4-207ENST00000435455 FAM98AQ8NCA5 519 aaKnown RBP15.11■□□□□ 0.01
SMPD4-207ENST00000435455 ST6GALNAC3Q8NDV1 305 aa15.11■□□□□ 0.01
SMPD4-207ENST00000435455 ZNF721Q8TF20 911 aa15.11■□□□□ 0.01
SMPD4-207ENST00000435455 NR4A3Q92570 626 aa15.11■□□□□ 0.01
SMPD4-207ENST00000435455 PPWD1Q96BP3 646 aaKnown RBP15.11■□□□□ 0.01
SMPD4-207ENST00000435455 SCMH1Q96GD3 660 aa15.11■□□□□ 0.01
SMPD4-207ENST00000435455 TAAR6Q96RI8 345 aa15.11■□□□□ 0.01
SMPD4-207ENST00000435455 FAIM2Q9BWQ8 316 aa15.11■□□□□ 0.01
SMPD4-207ENST00000435455 GATA5Q9BWX5 397 aaPredicted RBP15.11■□□□□ 0.01
SMPD4-207ENST00000435455 KLHL1Q9NR64 748 aa15.11■□□□□ 0.01
SMPD4-207ENST00000435455 SLC17A7Q9P2U7 560 aa15.11■□□□□ 0.01
SMPD4-207ENST00000435455 MYOTQ9UBF9 498 aa15.11■□□□□ 0.01
SMPD4-207ENST00000435455 PCDHA9Q9Y5H5 950 aa15.11■□□□□ 0.01
SMPD4-207ENST00000435455 CLEC18AA5D8T8 446 aa15.1■□□□□ 0.01
SMPD4-207ENST00000435455 GOLGA6L10A6NI86 522 aa15.1■□□□□ 0.01
SMPD4-207ENST00000435455 TMEM200CA6NKL6 621 aa15.1■□□□□ 0.01
SMPD4-207ENST00000435455 PCDH7O60245 1069 aa15.1■□□□□ 0.01
SMPD4-207ENST00000435455 ERLIN1O75477 346 aa15.1■□□□□ 0.01
SMPD4-207ENST00000435455 IGKV3-11P04433 115 aa15.1■□□□□ 0.01
SMPD4-207ENST00000435455 ALDH3A1P30838 453 aa15.1■□□□□ 0.01
SMPD4-207ENST00000435455 DEKP35659 375 aaKnown RBP15.1■□□□□ 0.01
SMPD4-207ENST00000435455 HK2P52789 917 aa15.1■□□□□ 0.01
SMPD4-207ENST00000435455 RNF4P78317 190 aa15.1■□□□□ 0.01
SMPD4-207ENST00000435455 HMGCS1Q01581 520 aa15.1■□□□□ 0.01
SMPD4-207ENST00000435455 MRPL49Q13405 166 aaKnown RBP15.1■□□□□ 0.01
SMPD4-207ENST00000435455 ZNF267Q14586 743 aaPredicted RBP15.1■□□□□ 0.01
SMPD4-207ENST00000435455 IMPG1Q17R60 797 aa15.1■□□□□ 0.01
SMPD4-207ENST00000435455 C6orf163Q5TEZ5 329 aa15.1■□□□□ 0.01
SMPD4-207ENST00000435455 ZNF324BQ6AW86 544 aaPredicted RBP15.1■□□□□ 0.01
SMPD4-207ENST00000435455 SLC48A1Q6P1K1 146 aa15.1■□□□□ 0.01
SMPD4-207ENST00000435455 GALNT18Q6P9A2 607 aa15.1■□□□□ 0.01
SMPD4-207ENST00000435455 SCIMPQ6UWF3 145 aa15.1■□□□□ 0.01
SMPD4-207ENST00000435455 CLEC18BQ6UXF7 455 aa15.1■□□□□ 0.01
SMPD4-207ENST00000435455 CYP4Z2PQ8N1L4 340 aa15.1■□□□□ 0.01
SMPD4-207ENST00000435455 ZNF321PQ8N8H1 164 aa15.1■□□□□ 0.01
SMPD4-207ENST00000435455 CLEC18CQ8NCF0 446 aa15.1■□□□□ 0.01
SMPD4-207ENST00000435455 TCP10LQ8TDR4 215 aa15.1■□□□□ 0.01
SMPD4-207ENST00000435455 RIT1Q92963 219 aa15.1■□□□□ 0.01
SMPD4-207ENST00000435455 TM4SF18Q96CE8 201 aa15.1■□□□□ 0.01
SMPD4-207ENST00000435455 SLX1AQ9BQ83 275 aa15.1■□□□□ 0.01
SMPD4-207ENST00000435455 GNG14A0A1W2PPG7 69 aa15.09■□□□□ 0.01
SMPD4-207ENST00000435455 WWP2O00308 870 aa15.09■□□□□ 0.01
SMPD4-207ENST00000435455 NME2P1O60361 137 aa15.09■□□□□ 0.01
SMPD4-207ENST00000435455 NPHS1O60500 1241 aa15.09■□□□□ 0.01
SMPD4-207ENST00000435455 OR2J2O76002 312 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms