RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 ZNF513Q8N8E2 541 aaPredicted RBP9.89□□□□□ -0.83
CD44-210ENST00000434472 GPR32P1Q8NGA4 272 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 OR2L8Q8NGY9 312 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 RNF217Q8TC41 542 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 C12orf66Q96MD2 445 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 ALOXE3Q9BYJ1 711 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 SFXN1Q9H9B4 322 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 AMBNQ9NP70 447 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 FZD3Q9NPG1 666 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 REV1Q9UBZ9 1251 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 SEC14L3Q9UDX4 400 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 ACAD8Q9UKU7 415 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 MKLN1Q9UL63 735 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 PNMA8BQ9ULN7 279 aaPredicted RBP9.89□□□□□ -0.83
CD44-210ENST00000434472 IFT52Q9Y366 437 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 UGT2A1Q9Y4X1 527 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 PCYT1BQ9Y5K3 369 aaPredicted RBP9.89□□□□□ -0.83
CD44-210ENST00000434472 PEX16Q9Y5Y5 336 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 GPC6Q9Y625 555 aaPredicted RBP9.89□□□□□ -0.83
CD44-210ENST00000434472 KIF26AQ9ULI4 1882 aaPredicted RBP9.88□□□□□ -0.83
CD44-210ENST00000434472 TRBV4-1A0A0J9YWV2 114 aa9.88□□□□□ -0.83
CD44-210ENST00000434472 PNMA8CA0A1B0GUJ8 204 aa9.88□□□□□ -0.83
CD44-210ENST00000434472 FEZF1A0PJY2 475 aa9.88□□□□□ -0.83
CD44-210ENST00000434472 AGAP5A6NIR3 686 aa9.88□□□□□ -0.83
CD44-210ENST00000434472 ANHXE9PGG2 379 aa9.88□□□□□ -0.83
CD44-210ENST00000434472 CCRL2O00421 344 aa9.88□□□□□ -0.83
CD44-210ENST00000434472 FFAR1O14842 300 aa9.88□□□□□ -0.83
CD44-210ENST00000434472 ZW10O43264 779 aa9.88□□□□□ -0.83
CD44-210ENST00000434472 TMPRSS11DO60235 418 aa9.88□□□□□ -0.83
CD44-210ENST00000434472 OR10H3O60404 316 aa9.88□□□□□ -0.83
CD44-210ENST00000434472 PTHP01270 115 aa9.88□□□□□ -0.83
CD44-210ENST00000434472 APODP05090 189 aa9.88□□□□□ -0.83
CD44-210ENST00000434472 NR2F1P10589 423 aa9.88□□□□□ -0.83
CD44-210ENST00000434472 IMPDH2P12268 514 aa9.88□□□□□ -0.83
CD44-210ENST00000434472 C5AR1P21730 350 aa9.88□□□□□ -0.83
CD44-210ENST00000434472 ELAVL4P26378 380 aaKnown RBP9.88□□□□□ -0.83
CD44-210ENST00000434472 POU1F1P28069 291 aa9.88□□□□□ -0.83
CD44-210ENST00000434472 PKLRP30613 574 aa9.88□□□□□ -0.83
CD44-210ENST00000434472 CSTF2P33240 577 aaKnown RBP eCLIP9.88□□□□□ -0.83
CD44-210ENST00000434472 DRD3P35462 400 aa9.88□□□□□ -0.83
CD44-210ENST00000434472 TRIM23P36406 574 aa9.88□□□□□ -0.83
CD44-210ENST00000434472 SLC15A1P46059 708 aa9.88□□□□□ -0.83
CD44-210ENST00000434472 RAB28P51157 221 aa9.88□□□□□ -0.83
CD44-210ENST00000434472 CRISP3P54108 245 aa9.88□□□□□ -0.83
CD44-210ENST00000434472 RHAGQ02094 409 aa9.88□□□□□ -0.83
CD44-210ENST00000434472 PRKCDQ05655 676 aa9.88□□□□□ -0.83
CD44-210ENST00000434472 TP53BP2Q13625 1128 aa9.88□□□□□ -0.83
CD44-210ENST00000434472 RUNX3Q13761 415 aa9.88□□□□□ -0.83
CD44-210ENST00000434472 KRT33BQ14525 404 aa9.88□□□□□ -0.83
CD44-210ENST00000434472 NCF4Q15080 339 aa9.88□□□□□ -0.83
CD44-210ENST00000434472 CST6Q15828 149 aa9.88□□□□□ -0.83
CD44-210ENST00000434472 ZIC1Q15915 447 aa9.88□□□□□ -0.83
CD44-210ENST00000434472 OCLNQ16625 522 aa9.88□□□□□ -0.83
CD44-210ENST00000434472 PERM1Q5SV97 790 aa9.88□□□□□ -0.83
CD44-210ENST00000434472 PRAMEF8Q5VWM4 474 aa9.88□□□□□ -0.83
CD44-210ENST00000434472 PRAMEF7Q5VXH5 474 aa9.88□□□□□ -0.83
CD44-210ENST00000434472 RNLSQ5VYX0 342 aa9.88□□□□□ -0.83
CD44-210ENST00000434472 PPP2R2DQ66LE6 453 aa9.88□□□□□ -0.83
CD44-210ENST00000434472 C12orf73Q69YU5 71 aa9.88□□□□□ -0.83
CD44-210ENST00000434472 CASP12Q6UXS9 341 aa9.88□□□□□ -0.83
CD44-210ENST00000434472 TMC5Q6UXY8 1006 aa9.88□□□□□ -0.83
CD44-210ENST00000434472 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.88□□□□□ -0.83
CD44-210ENST00000434472 PLEKHG7Q6ZR37 379 aa9.88□□□□□ -0.83
CD44-210ENST00000434472 ADCK2Q7Z695 626 aa9.88□□□□□ -0.83
CD44-210ENST00000434472 UBE3DQ7Z6J8 389 aa9.88□□□□□ -0.83
CD44-210ENST00000434472 YAF2Q8IY57 180 aa9.88□□□□□ -0.83
CD44-210ENST00000434472 C12orf76Q8N812 135 aaPredicted RBP9.88□□□□□ -0.83
CD44-210ENST00000434472 IL17RCQ8NAC3 791 aa9.88□□□□□ -0.83
CD44-210ENST00000434472 SRFBP1Q8NEF9 429 aaKnown RBP9.88□□□□□ -0.83
CD44-210ENST00000434472 CREB3L4Q8TEY5 395 aa9.88□□□□□ -0.83
CD44-210ENST00000434472 KLHL6Q8WZ60 621 aa9.88□□□□□ -0.83
CD44-210ENST00000434472 FGF13Q92913 245 aa9.88□□□□□ -0.83
CD44-210ENST00000434472 BBS4Q96RK4 519 aa9.88□□□□□ -0.83
CD44-210ENST00000434472 INSM2Q96T92 566 aaPredicted RBP9.88□□□□□ -0.83
CD44-210ENST00000434472 DPH7Q9BTV6 452 aa9.88□□□□□ -0.83
CD44-210ENST00000434472 RSPH9Q9H1X1 276 aaPredicted RBP9.88□□□□□ -0.83
CD44-210ENST00000434472 OR51I1Q9H343 314 aa9.88□□□□□ -0.83
CD44-210ENST00000434472 MVB12BQ9H7P6 319 aa9.88□□□□□ -0.83
CD44-210ENST00000434472 SP140LQ9H930 580 aa9.88□□□□□ -0.83
CD44-210ENST00000434472 SLC25A19Q9HC21 320 aa9.88□□□□□ -0.83
CD44-210ENST00000434472 BCL2L10Q9HD36 194 aa9.88□□□□□ -0.83
CD44-210ENST00000434472 LHX9Q9NQ69 397 aa9.88□□□□□ -0.83
CD44-210ENST00000434472 SLC35C2Q9NQQ7 365 aa9.88□□□□□ -0.83
CD44-210ENST00000434472 RHCGQ9UBD6 479 aa9.88□□□□□ -0.83
CD44-210ENST00000434472 SLC9A8Q9Y2E8 581 aa9.88□□□□□ -0.83
CD44-210ENST00000434472 RPL36Q9Y3U8 105 aaKnown RBP9.88□□□□□ -0.83
CD44-210ENST00000434472 CFAP20Q9Y6A4 193 aaKnown RBP9.88□□□□□ -0.83
CD44-210ENST00000434472 STON1Q9Y6Q2 735 aa9.88□□□□□ -0.83
CD44-210ENST00000434472 KRBA1A5PL33 1030 aa9.87□□□□□ -0.83
CD44-210ENST00000434472 OTOL1A6NHN0 477 aaPredicted RBP9.87□□□□□ -0.83
CD44-210ENST00000434472 UGT2B17O75795 530 aa9.87□□□□□ -0.83
CD44-210ENST00000434472 KAT7O95251 611 aa9.87□□□□□ -0.83
CD44-210ENST00000434472 DBTP11182 482 aaKnown RBP9.87□□□□□ -0.83
CD44-210ENST00000434472 TGM1P22735 817 aa9.87□□□□□ -0.83
CD44-210ENST00000434472 PSMB5P28074 263 aa9.87□□□□□ -0.83
CD44-210ENST00000434472 AHRP35869 848 aa9.87□□□□□ -0.83
CD44-210ENST00000434472 TSFMP43897 325 aaKnown RBP9.87□□□□□ -0.83
CD44-210ENST00000434472 XKP51811 444 aa9.87□□□□□ -0.83
CD44-210ENST00000434472 RPS26P62854 115 aaKnown RBP9.87□□□□□ -0.83
CD44-210ENST00000434472 HTRA3P83110 453 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms