RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 OTULINQ96BN8 352 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 CHST8Q9H2A9 424 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 SPATA2Q9UM82 520 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 EXO1Q9UQ84 846 aaKnown RBP11□□□□□ -0.65
HMGCS1-202ENST00000433297 HNRNPCL2B2RXH8 293 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 TEX46H3BTG2 121 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 RAB36O95755 333 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 ICAM2P13598 275 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 IDSP22304 550 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 CPT1AP50416 773 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 LIM2P55344 173 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 STK11Q15831 433 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 GRK1Q15835 563 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 ZNF385BQ569K4 471 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 ANXA8L1Q5VT79 327 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 SLC30A8Q8IWU4 369 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 OR8J1Q8NGP2 316 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 HUS1BQ8NHY5 278 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 UBTD2Q8WUN7 234 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 SLC9A6Q92581 669 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 UFD1Q92890 307 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 KCTD5Q9NXV2 234 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 TNS1Q9HBL0 1735 aaKnown RBP10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 E7EQ34 232 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 SEC14L5O43304 696 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 LANCL1O43813 399 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 IFNA14P01570 189 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 FCER2P06734 321 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 BPIP17213 487 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 RHCEP18577 417 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 CELP19835 753 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 CD22P20273 847 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 STOMP27105 288 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 CD79BP40259 229 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 SLC11A2P49281 568 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 EVX1P49640 407 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 ARF5P84085 180 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 PCDH1Q08174 1060 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 LRRC70Q7Z2Q7 622 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 OR11H7Q8NGC8 314 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 NEIL3Q8TAT5 605 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 CHTF18Q8WVB6 975 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 ASIC4Q96FT7 647 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 OTUB1Q96FW1 271 aaPredicted RBP10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 SUSD3Q96L08 255 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 ART5Q96L15 291 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 RBCK1Q9BYM8 510 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 PIGUQ9H490 435 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 RDH14Q9HBH5 336 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 CLCA2Q9UQC9 943 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 DOCK4Q8N1I0 1966 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 C5orf58C9J3I9 102 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 FFAR1O14842 300 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 LGI1O95970 557 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 C1SP09871 688 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 JUPP14923 745 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 CDH4P55283 916 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 WNT4P56705 351 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 PLK5Q496M5 336 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 SPRYD7Q5W111 196 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 TNFAIP8L2Q6P589 184 aaPredicted RBP10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 TRIM40Q6P9F5 258 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 NCEH1Q6PIU2 408 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 KIAA1324Q6UXG2 1013 aaKnown RBP10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 ZNF782Q6ZMW2 699 aaPredicted RBP10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 PRSS42Q7Z5A4 293 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 GPR142Q7Z601 462 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 TSPAN33Q86UF1 283 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 ZNF280BQ86YH2 543 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 TMEM163Q8TC26 289 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 KIAA1143Q96AT1 154 aaPredicted RBP10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 MYO19Q96H55 970 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 SENP5Q96HI0 755 aaPredicted RBP10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 GPR137Q96N19 417 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 ADAM2Q99965 735 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 TRAF4Q9BUZ4 470 aaPredicted RBP10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 ARHGAP39Q9C0H5 1083 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 SAP130Q9H0E3 1048 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 RANBP3Q9H6Z4 567 aaPredicted RBP10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 MBD1Q9UIS9 605 aaPredicted RBP10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 MRPS7Q9Y2R9 242 aaKnown RBP10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 GAPDHSO14556 408 aaPredicted RBP10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 TPPPO94811 219 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 IFNA7P01567 189 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 CPEP16870 476 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 MAP2K6P52564 334 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 VSX2P58304 361 aaPredicted RBP10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 COX10Q12887 443 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 ADAM15Q13444 863 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 GINS1Q14691 196 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 CTXN3Q4LDR2 81 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 GPR155Q7Z3F1 870 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 CPA6Q8N4T0 437 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 FOXJ1Q92949 421 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 FOLH1BQ9HBA9 442 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 THSD1Q9NS62 852 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 NKIRAS2Q9NYR9 191 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 UBQLN2Q9UHD9 624 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 ATP6V1HQ9UI12 483 aa10.99□□□□□ -0.65
HMGCS1-202ENST00000433297 EEF1E1O43324 174 aaKnown RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms