RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 ZSCAN12O43309 604 aa13.7□□□□□ -0.22
PRKDC-203ENST00000432581 TGFB1P01137 390 aa13.7□□□□□ -0.22
PRKDC-203ENST00000432581 FBXO45P0C2W1 286 aa13.7□□□□□ -0.22
PRKDC-203ENST00000432581 RFPL3SP0C7P2 107 aa13.7□□□□□ -0.22
PRKDC-203ENST00000432581 PCNAP12004 261 aa13.7□□□□□ -0.22
PRKDC-203ENST00000432581 STMN1P16949 149 aa13.7□□□□□ -0.22
PRKDC-203ENST00000432581 EPORP19235 508 aa13.7□□□□□ -0.22
PRKDC-203ENST00000432581 SERPINB3P29508 390 aa13.7□□□□□ -0.22
PRKDC-203ENST00000432581 TLX1P31314 330 aaPredicted RBP13.7□□□□□ -0.22
PRKDC-203ENST00000432581 UQCRC1P31930 480 aa13.7□□□□□ -0.22
PRKDC-203ENST00000432581 ASCL1P50553 236 aa13.7□□□□□ -0.22
PRKDC-203ENST00000432581 CBLBQ13191 982 aa13.7□□□□□ -0.22
PRKDC-203ENST00000432581 OR4D1Q15615 310 aa13.7□□□□□ -0.22
PRKDC-203ENST00000432581 CEBPEQ15744 281 aa13.7□□□□□ -0.22
PRKDC-203ENST00000432581 PRAMEF20Q5VT98 475 aa13.7□□□□□ -0.22
PRKDC-203ENST00000432581 KHDRBS2Q5VWX1 349 aaKnown RBP13.7□□□□□ -0.22
PRKDC-203ENST00000432581 OR4C11Q6IEV9 310 aa13.7□□□□□ -0.22
PRKDC-203ENST00000432581 LYPD8Q6UX82 237 aa13.7□□□□□ -0.22
PRKDC-203ENST00000432581 SLC29A4Q7RTT9 530 aa13.7□□□□□ -0.22
PRKDC-203ENST00000432581 OR4N5Q8IXE1 308 aa13.7□□□□□ -0.22
PRKDC-203ENST00000432581 ZBED8Q8IZ13 594 aa13.7□□□□□ -0.22
PRKDC-203ENST00000432581 FAM13CQ8NE31 585 aa13.7□□□□□ -0.22
PRKDC-203ENST00000432581 GOT1L1Q8NHS2 421 aaPredicted RBP13.7□□□□□ -0.22
PRKDC-203ENST00000432581 FAM222BQ8WU58 562 aa13.7□□□□□ -0.22
PRKDC-203ENST00000432581 CMTM7Q96FZ5 175 aa13.7□□□□□ -0.22
PRKDC-203ENST00000432581 ALPK1Q96QP1 1244 aa13.7□□□□□ -0.22
PRKDC-203ENST00000432581 GPR22Q99680 433 aa13.7□□□□□ -0.22
PRKDC-203ENST00000432581 PELOQ9BRX2 385 aaKnown RBP13.7□□□□□ -0.22
PRKDC-203ENST00000432581 CENPKQ9BS16 269 aa13.7□□□□□ -0.22
PRKDC-203ENST00000432581 CAB39LQ9H9S4 337 aa13.7□□□□□ -0.22
PRKDC-203ENST00000432581 ADGRE2Q9UHX3 823 aa13.7□□□□□ -0.22
PRKDC-203ENST00000432581 PHF11Q9UIL8 331 aa13.7□□□□□ -0.22
PRKDC-203ENST00000432581 FOXD3Q9UJU5 478 aaPredicted RBP13.7□□□□□ -0.22
PRKDC-203ENST00000432581 RNF112Q9ULX5 631 aa13.7□□□□□ -0.22
PRKDC-203ENST00000432581 CHCHD2Q9Y6H1 151 aaPredicted RBP13.7□□□□□ -0.22
PRKDC-203ENST00000432581 ZNF469Q96JG9 3925 aaPredicted RBP13.7□□□□□ -0.22
PRKDC-203ENST00000432581 NIPBLQ6KC79 2804 aaeCLIP13.7□□□□□ -0.22
PRKDC-203ENST00000432581 MAP1AP78559 2803 aaPredicted RBP13.69□□□□□ -0.22
PRKDC-203ENST00000432581 IQANK1A0A1B0GTG1 560 aa13.69□□□□□ -0.22
PRKDC-203ENST00000432581 A6NNC1 897 aa13.69□□□□□ -0.22
PRKDC-203ENST00000432581 AHRRA9YTQ3 701 aa13.69□□□□□ -0.22
PRKDC-203ENST00000432581 TP73O15350 636 aa13.69□□□□□ -0.22
PRKDC-203ENST00000432581 ALOX15P16050 662 aaPredicted RBP13.69□□□□□ -0.22
PRKDC-203ENST00000432581 PCDH1Q08174 1060 aa13.69□□□□□ -0.22
PRKDC-203ENST00000432581 SLAMF1Q13291 335 aa13.69□□□□□ -0.22
PRKDC-203ENST00000432581 SPRED3Q2MJR0 410 aa13.69□□□□□ -0.22
PRKDC-203ENST00000432581 FBXL19-AS1Q494R0 122 aa13.69□□□□□ -0.22
PRKDC-203ENST00000432581 FLYWCH1Q4VC44 716 aa13.69□□□□□ -0.22
PRKDC-203ENST00000432581 TBCELQ5QJ74 424 aa13.69□□□□□ -0.22
PRKDC-203ENST00000432581 DEPDC1Q5TB30 811 aa13.69□□□□□ -0.22
PRKDC-203ENST00000432581 MAATS1Q7Z4T9 603 aa13.69□□□□□ -0.22
PRKDC-203ENST00000432581 GPR180Q86V85 440 aa13.69□□□□□ -0.22
PRKDC-203ENST00000432581 ST13P4Q8IZP2 240 aaPredicted RBP13.69□□□□□ -0.22
PRKDC-203ENST00000432581 OR7G3Q8NG95 312 aa13.69□□□□□ -0.22
PRKDC-203ENST00000432581 OR10G3Q8NGC4 313 aa13.69□□□□□ -0.22
PRKDC-203ENST00000432581 STAG3L4Q8TBR4 150 aa13.69□□□□□ -0.22
PRKDC-203ENST00000432581 RNASE6Q93091 150 aaKnown RBP13.69□□□□□ -0.22
PRKDC-203ENST00000432581 RGMAQ96B86 450 aa13.69□□□□□ -0.22
PRKDC-203ENST00000432581 PPWD1Q96BP3 646 aaKnown RBP13.69□□□□□ -0.22
PRKDC-203ENST00000432581 CPNE1Q99829 537 aa13.69□□□□□ -0.22
PRKDC-203ENST00000432581 DOHHQ9BU89 302 aa13.69□□□□□ -0.22
PRKDC-203ENST00000432581 TRIM31Q9BZY9 425 aa13.69□□□□□ -0.22
PRKDC-203ENST00000432581 SLC6A15Q9H2J7 730 aa13.69□□□□□ -0.22
PRKDC-203ENST00000432581 LIME1Q9H400 295 aa13.69□□□□□ -0.22
PRKDC-203ENST00000432581 SMYD2Q9NRG4 433 aa13.69□□□□□ -0.22
PRKDC-203ENST00000432581 MTRF1LQ9UGC7 380 aaKnown RBP13.69□□□□□ -0.22
PRKDC-203ENST00000432581 ANKRD33BA6NCL7 494 aa13.68□□□□□ -0.22
PRKDC-203ENST00000432581 OR6C76A6NM76 312 aa13.68□□□□□ -0.22
PRKDC-203ENST00000432581 EFCAB8A8MWE9 144 aa13.68□□□□□ -0.22
PRKDC-203ENST00000432581 SAP18O00422 153 aaKnown RBP13.68□□□□□ -0.22
PRKDC-203ENST00000432581 PROM1O43490 865 aa13.68□□□□□ -0.22
PRKDC-203ENST00000432581 SH3BGRLO75368 114 aa13.68□□□□□ -0.22
PRKDC-203ENST00000432581 FAM155BO75949 473 aa13.68□□□□□ -0.22
PRKDC-203ENST00000432581 EPPINO95925 133 aa13.68□□□□□ -0.22
PRKDC-203ENST00000432581 HOXB4P17483 251 aaPredicted RBP13.68□□□□□ -0.22
PRKDC-203ENST00000432581 BMP5P22003 454 aa13.68□□□□□ -0.22
PRKDC-203ENST00000432581 BUD31P41223 144 aaPredicted RBP13.68□□□□□ -0.22
PRKDC-203ENST00000432581 RAP1GDS1P52306 607 aa13.68□□□□□ -0.22
PRKDC-203ENST00000432581 ARFIP1P53367 373 aa13.68□□□□□ -0.22
PRKDC-203ENST00000432581 TNFRSF17Q02223 184 aa13.68□□□□□ -0.22
PRKDC-203ENST00000432581 SNTB1Q13884 538 aaKnown RBP13.68□□□□□ -0.22
PRKDC-203ENST00000432581 SF3B4Q15427 424 aaKnown RBP eCLIP13.68□□□□□ -0.227e-6■■■■■ 27.2
PRKDC-203ENST00000432581 ZKSCAN8Q15776 578 aaPredicted RBP13.68□□□□□ -0.22
PRKDC-203ENST00000432581 NTRK2Q16620 822 aa13.68□□□□□ -0.22
PRKDC-203ENST00000432581 ACSF3Q4G176 576 aaPredicted RBP13.68□□□□□ -0.22
PRKDC-203ENST00000432581 RNF111Q6ZNA4 994 aa13.68□□□□□ -0.22
PRKDC-203ENST00000432581 CAPN12Q6ZSI9 719 aa13.68□□□□□ -0.22
PRKDC-203ENST00000432581 SEM1Q6ZVN7 128 aa13.68□□□□□ -0.22
PRKDC-203ENST00000432581 CAMKMTQ7Z624 323 aa13.68□□□□□ -0.22
PRKDC-203ENST00000432581 CDC20BQ86Y33 519 aa13.68□□□□□ -0.22
PRKDC-203ENST00000432581 LACC1Q8IV20 430 aa13.68□□□□□ -0.22
PRKDC-203ENST00000432581 TAGAPQ8N103 731 aa13.68□□□□□ -0.22
PRKDC-203ENST00000432581 ZCCHC7Q8N3Z6 543 aaKnown RBP13.68□□□□□ -0.22
PRKDC-203ENST00000432581 RELL2Q8NC24 303 aaPredicted RBP13.68□□□□□ -0.22
PRKDC-203ENST00000432581 PYROXD1Q8WU10 500 aa13.68□□□□□ -0.22
PRKDC-203ENST00000432581 EXT2Q93063 718 aa13.68□□□□□ -0.22
PRKDC-203ENST00000432581 MBD6Q96DN6 1003 aa13.68□□□□□ -0.22
PRKDC-203ENST00000432581 UBXN10Q96LJ8 280 aa13.68□□□□□ -0.22
PRKDC-203ENST00000432581 ZNF597Q96LX8 424 aa13.68□□□□□ -0.22
PRKDC-203ENST00000432581 JSRP1Q96MG2 331 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms