RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 OR56B1Q8NGI3 324 aa2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 OR10G7Q8NGN6 311 aa2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 TBC1D31Q96DN5 1066 aa2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 C16orf58Q96GQ5 468 aa2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 NSMCE2Q96MF7 247 aa2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 CBWD1Q9BRT8 395 aa2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 DCTN5Q9BTE1 182 aa2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 CLEC7AQ9BXN2 247 aa2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 KRTAP1-5Q9BYS1 174 aa2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 KRT23Q9C075 422 aa2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 CCSER1Q9C0I3 900 aa2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 ATG10Q9H0Y0 220 aa2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 MTIF3Q9H2K0 278 aaKnown RBP2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 PARLQ9H300 379 aa2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 ECT2Q9H8V3 914 aa2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 MED20Q9H944 212 aa2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 GPN1Q9HCN4 374 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 FGF22Q9HCT0 170 aa2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 INTS10Q9NVR2 710 aaKnown RBP2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 SOHLH2Q9NX45 425 aa2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 CNOT2Q9NZN8 540 aaKnown RBP2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 KLHL8Q9P2G9 620 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 HOOK1Q9UJC3 728 aaKnown RBP2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 DIMT1Q9UNQ2 313 aaKnown RBP2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 PPP1R3CQ9UQK1 317 aa2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 ENTPD4Q9Y227 616 aa2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 CSNK1G3Q9Y6M4 447 aa2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 BLMP54132 1417 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 CDK13Q14004 1512 aaKnown RBP2.65□□□□□ -1.99
HMGB1P27-201ENST00000431429 F8WDY8 70 aa2.65□□□□□ -1.99
HMGB1P27-201ENST00000431429 EDIL3O43854 480 aa2.65□□□□□ -1.99
HMGB1P27-201ENST00000431429 SSX5O60225 188 aa2.65□□□□□ -1.99
HMGB1P27-201ENST00000431429 HSF2BPO75031 334 aa2.65□□□□□ -1.99
HMGB1P27-201ENST00000431429 REC8O95072 547 aa2.65□□□□□ -1.99
HMGB1P27-201ENST00000431429 OR6A2O95222 327 aa2.65□□□□□ -1.99
HMGB1P27-201ENST00000431429 MT-ATP6P00846 226 aa2.65□□□□□ -1.99
HMGB1P27-201ENST00000431429 IGLV1-44P01699 117 aa2.65□□□□□ -1.99
HMGB1P27-201ENST00000431429 IGHEP01854 428 aa2.65□□□□□ -1.99
HMGB1P27-201ENST00000431429 ZCCHC18P0CG32 403 aa2.65□□□□□ -1.99
HMGB1P27-201ENST00000431429 TPBGLP0DKB5 382 aa2.65□□□□□ -1.99
HMGB1P27-201ENST00000431429 CCDC192P0DO97 292 aa2.65□□□□□ -1.99
HMGB1P27-201ENST00000431429 GIFP27352 417 aa2.65□□□□□ -1.99
HMGB1P27-201ENST00000431429 SLC6A12P48065 614 aa2.65□□□□□ -1.99
HMGB1P27-201ENST00000431429 TKTL1P51854 596 aa2.65□□□□□ -1.99
HMGB1P27-201ENST00000431429 LIMK2P53671 638 aa2.65□□□□□ -1.99
HMGB1P27-201ENST00000431429 CRYBA2P53672 197 aa2.65□□□□□ -1.99
HMGB1P27-201ENST00000431429 ABCE1P61221 599 aaKnown RBP2.65□□□□□ -1.99
HMGB1P27-201ENST00000431429 HNRNPDQ14103 355 aaKnown RBP2.65□□□□□ -1.99
HMGB1P27-201ENST00000431429 DPYSQ14117 519 aa2.65□□□□□ -1.99
HMGB1P27-201ENST00000431429 PDIA5Q14554 519 aa2.65□□□□□ -1.99
HMGB1P27-201ENST00000431429 KRT31Q15323 416 aa2.65□□□□□ -1.99
HMGB1P27-201ENST00000431429 TRADDQ15628 312 aa2.65□□□□□ -1.99
HMGB1P27-201ENST00000431429 INAQ16352 499 aa2.65□□□□□ -1.99
HMGB1P27-201ENST00000431429 HLA-BQ31612 363 aa2.65□□□□□ -1.99
HMGB1P27-201ENST00000431429 CCDC40Q4G0X9 1142 aa2.65□□□□□ -1.99
HMGB1P27-201ENST00000431429 NEPROQ6NW34 567 aa2.65□□□□□ -1.99
HMGB1P27-201ENST00000431429 ARHGAP11AQ6P4F7 1023 aa2.65□□□□□ -1.99
HMGB1P27-201ENST00000431429 YRDCQ86U90 279 aaKnown RBP2.65□□□□□ -1.99
HMGB1P27-201ENST00000431429 NR2C2APQ86WQ0 139 aa2.65□□□□□ -1.99
HMGB1P27-201ENST00000431429 CARM1Q86X55 608 aa2.65□□□□□ -1.99
HMGB1P27-201ENST00000431429 RAB42Q8N4Z0 105 aa2.65□□□□□ -1.99
HMGB1P27-201ENST00000431429 GVQW1Q8N7I0 195 aa2.65□□□□□ -1.99
HMGB1P27-201ENST00000431429 COLGALT1Q8NBJ5 622 aa2.65□□□□□ -1.99
HMGB1P27-201ENST00000431429 OR9Q2Q8NGE9 314 aa2.65□□□□□ -1.99
HMGB1P27-201ENST00000431429 C11orf45Q8TAV5 145 aa2.65□□□□□ -1.99
HMGB1P27-201ENST00000431429 LIPHQ8WWY8 451 aa2.65□□□□□ -1.99
HMGB1P27-201ENST00000431429 ARHGAP45Q92619 1136 aa2.65□□□□□ -1.99
HMGB1P27-201ENST00000431429 PNPLA2Q96AD5 504 aa2.65□□□□□ -1.99
HMGB1P27-201ENST00000431429 CNRIP1Q96F85 164 aaPredicted RBP2.65□□□□□ -1.99
HMGB1P27-201ENST00000431429 PCED1BQ96HM7 432 aa2.65□□□□□ -1.99
HMGB1P27-201ENST00000431429 NSMCE3Q96MG7 304 aa2.65□□□□□ -1.99
HMGB1P27-201ENST00000431429 DUX3Q96PT4 197 aa2.65□□□□□ -1.99
HMGB1P27-201ENST00000431429 EPYCQ99645 322 aa2.65□□□□□ -1.99
HMGB1P27-201ENST00000431429 LIN28AQ9H9Z2 209 aaKnown RBP2.65□□□□□ -1.99
HMGB1P27-201ENST00000431429 MED17Q9NVC6 651 aa2.65□□□□□ -1.99
HMGB1P27-201ENST00000431429 BARHL2Q9NY43 387 aa2.65□□□□□ -1.99
HMGB1P27-201ENST00000431429 KLK11Q9UBX7 282 aa2.65□□□□□ -1.99
HMGB1P27-201ENST00000431429 CACNG5Q9UF02 275 aa2.65□□□□□ -1.99
HMGB1P27-201ENST00000431429 ASIC3Q9UHC3 531 aa2.65□□□□□ -1.99
HMGB1P27-201ENST00000431429 IL20RAQ9UHF4 553 aa2.65□□□□□ -1.99
HMGB1P27-201ENST00000431429 LNPEPQ9UIQ6 1025 aa2.65□□□□□ -1.99
HMGB1P27-201ENST00000431429 NUDCQ9Y266 331 aa2.65□□□□□ -1.99
HMGB1P27-201ENST00000431429 KLHDC2Q9Y2U9 406 aa2.65□□□□□ -1.99
HMGB1P27-201ENST00000431429 C3P01024 1663 aa2.65□□□□□ -1.99
HMGB1P27-201ENST00000431429 NCAPD2Q15021 1401 aa2.65□□□□□ -1.99
HMGB1P27-201ENST00000431429 NCOA3Q9Y6Q9 1424 aa2.65□□□□□ -1.99
HMGB1P27-201ENST00000431429 NUP153P49790 1475 aaKnown RBP2.65□□□□□ -1.99
HMGB1P27-201ENST00000431429 ABCC1P33527 1531 aa2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 ARHGAP5Q13017 1502 aa2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 LOC105371242A0A075B767 164 aa2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 PRR23AA6NEV1 266 aa2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 YJEFN3A6XGL0 299 aa2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 ZNF724A8MTY0 619 aa2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 K7EPI3 171 aa2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 EEF2KO00418 725 aaKnown RBP2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 KRT86O43790 486 aa2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 TSPAN2O60636 221 aa2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 MTRF1O75570 445 aaKnown RBP2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 SYNGR4O95473 234 aa2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 FHP07954 510 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms